RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 C9orf131Q5VYM1 1079 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 ZNF280DQ6N043 979 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 C8orf74Q6P047 294 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 MAEAQ7L5Y9 396 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 ADSSL1Q8N142 457 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 GIMAP8Q8ND71 665 aaPredicted RBP8.18□□□□□ -1.1
HDAC9-218ENST00000456174 NOC3LQ8WTT2 800 aaKnown RBP8.18□□□□□ -1.1
HDAC9-218ENST00000456174 STK32AQ8WU08 396 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 NELFBQ8WX92 580 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 PBKQ96KB5 322 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 GBP5Q96PP8 586 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 SPATA16Q9BXB7 569 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 MIS12Q9H081 205 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 CCDC134Q9H6E4 229 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 EXOC1Q9NV70 894 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 NKX1-2Q9UD57 310 aaPredicted RBP8.18□□□□□ -1.1
HDAC9-218ENST00000456174 CROTQ9UKG9 612 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 OTOFQ9HC10 1997 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 MYMKA6NI61 221 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 C19orf81C9J6K1 198 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 NFIBO00712 420 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 BACH1O14867 736 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 SLC26A4O43511 780 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 COBLO75128 1261 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 ZBED4O75132 1171 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 PEX11AO75192 247 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 GNA14O95837 355 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 OAS1P00973 400 aaKnown RBP8.17□□□□□ -1.1
HDAC9-218ENST00000456174 ASLP04424 464 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 TPBGLP0DKB5 382 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 ALAS1P13196 640 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 TCP1P17987 556 aaKnown RBP8.17□□□□□ -1.1
HDAC9-218ENST00000456174 VARSP26640 1264 aaKnown RBP8.17□□□□□ -1.1
HDAC9-218ENST00000456174 MLH1P40692 756 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 SKIV2L2P42285 1042 aaKnown RBP8.17□□□□□ -1.1
HDAC9-218ENST00000456174 CARSP49589 748 aaKnown RBP8.17□□□□□ -1.1
HDAC9-218ENST00000456174 HSD17B4P51659 736 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 RAD23BP54727 409 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 HMGCS2P54868 508 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 COPS2P61201 443 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 ZNF844Q08AG5 666 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 C16orf87Q6PH81 154 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 CLEC4DQ8WXI8 215 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 DCPSQ96C86 337 aaKnown RBP8.17□□□□□ -1.1
HDAC9-218ENST00000456174 KLHL29Q96CT2 875 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 LRRC27Q9C0I9 530 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 INIPQ9NRY2 104 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 ABCF3Q9NUQ8 709 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 CYP39A1Q9NYL5 469 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 NFU1Q9UMS0 254 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 KIAA1024Q9UPX6 916 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 PTPRFP10586 1907 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 A0A0J9YVX5 310 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 POTEB3A0JP26 581 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 MAGEA13PA6NCF6 341 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 POTECB2RU33 542 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 VWA5AO00534 786 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 MED24O75448 989 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 USP2O75604 605 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-218ENST00000456174 ALDH2P05091 517 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 ITGA2BP08514 1039 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 FDX1P10109 184 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 FUT4P22083 530 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 SERPINB4P48594 390 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 CACNA2D1P54289 1103 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 CDK17Q00537 523 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 NOL9Q5SY16 702 aaKnown RBP8.17□□□□□ -1.1
HDAC9-218ENST00000456174 POTEBQ6S5H4 581 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 DLK2Q6UY11 383 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 DYMQ7RTS9 669 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 MCF2L2Q86YR7 1114 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 SULF1Q8IWU6 871 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 CCDC65Q8IXS2 484 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 RBBP8NLQ8NC74 664 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-218ENST00000456174 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.17□□□□□ -1.1
HDAC9-218ENST00000456174 WDR60Q8WVS4 1066 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 LENG1Q96BZ8 264 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-218ENST00000456174 HIC2Q96JB3 615 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 ZNF333Q96JL9 665 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 C12orf42Q96LP6 360 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 CATSPER2Q96P56 530 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 RAB3IPQ96QF0 476 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-218ENST00000456174 HINFPQ9BQA5 517 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 HOMER2Q9NSB8 354 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 EFR3BQ9Y2G0 817 aa8.17□□□□□ -1.1
HDAC9-218ENST00000456174 PAPPA2Q9BXP8 1791 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 PVALEFA0A1B0GWK0 134 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 SIGLEC16A6NMB1 481 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 ADM5C9JUS6 153 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 E9PMD0 336 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 RNF225M0QZC1 329 aaPredicted RBP8.16□□□□□ -1.1
HDAC9-218ENST00000456174 PSMA7O14818 248 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 HNRNPRO43390 633 aaKnown RBP8.16□□□□□ -1.1
HDAC9-218ENST00000456174 LGR5O75473 907 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 FCER1AP12319 257 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 HPCAP84074 193 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 STK4Q13043 487 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 PARP6Q2NL67 630 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 CEP55Q53EZ4 464 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 CNNM4Q6P4Q7 775 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms