RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 PRR5-ARHGAP8B1AHC4 643 aa11.02□□□□□ -0.65
CLCN4-204ENST00000454850 XYLBO75191 536 aa11.02□□□□□ -0.65
CLCN4-204ENST00000454850 NPTXRO95502 500 aa11.02□□□□□ -0.65
CLCN4-204ENST00000454850 HMGB1P09429 215 aaKnown RBP11.02□□□□□ -0.65
CLCN4-204ENST00000454850 KCNA4P22459 653 aa11.02□□□□□ -0.65
CLCN4-204ENST00000454850 CCT2P78371 535 aaKnown RBP11.02□□□□□ -0.65
CLCN4-204ENST00000454850 ARHGAP8P85298 464 aa11.02□□□□□ -0.65
CLCN4-204ENST00000454850 PFKPQ01813 784 aa11.02□□□□□ -0.65
CLCN4-204ENST00000454850 NCBP1Q09161 790 aaKnown RBP11.02□□□□□ -0.65
CLCN4-204ENST00000454850 NTRK3Q16288 839 aa11.02□□□□□ -0.65
CLCN4-204ENST00000454850 PSMD5Q16401 504 aa11.02□□□□□ -0.65
CLCN4-204ENST00000454850 XKR9Q5GH70 373 aa11.02□□□□□ -0.65
CLCN4-204ENST00000454850 ZBTB41Q5SVQ8 909 aa11.02□□□□□ -0.65
CLCN4-204ENST00000454850 FERMT3Q86UX7 667 aa11.02□□□□□ -0.65
CLCN4-204ENST00000454850 CDR2LQ86X02 465 aaPredicted RBP11.02□□□□□ -0.65
CLCN4-204ENST00000454850 EXOC8Q8IYI6 725 aa11.02□□□□□ -0.65
CLCN4-204ENST00000454850 HACE1Q8IYU2 909 aa11.02□□□□□ -0.65
CLCN4-204ENST00000454850 TCP11Q8WWU5 503 aa11.02□□□□□ -0.65
CLCN4-204ENST00000454850 CCDC51Q96ER9 411 aa11.02□□□□□ -0.65
CLCN4-204ENST00000454850 JAKMIP1Q96N16 626 aaKnown RBP11.02□□□□□ -0.65
CLCN4-204ENST00000454850 MBOAT7Q96N66 472 aa11.02□□□□□ -0.65
CLCN4-204ENST00000454850 PAAF1Q9BRP4 392 aa11.02□□□□□ -0.65
CLCN4-204ENST00000454850 LXNQ9BS40 222 aa11.02□□□□□ -0.65
CLCN4-204ENST00000454850 PARD6AQ9NPB6 346 aa11.02□□□□□ -0.65
CLCN4-204ENST00000454850 HCFC1R1Q9NWW0 138 aa11.02□□□□□ -0.65
CLCN4-204ENST00000454850 PARP2Q9UGN5 583 aa11.02□□□□□ -0.65
CLCN4-204ENST00000454850 GMEB2Q9UKD1 530 aa11.02□□□□□ -0.65
CLCN4-204ENST00000454850 PCDHA4Q9UN74 947 aa11.02□□□□□ -0.65
CLCN4-204ENST00000454850 GIT1Q9Y2X7 761 aa11.02□□□□□ -0.65
CLCN4-204ENST00000454850 CYP3A7-CYP3A51PA0A087WV96 503 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 CASTOR2A6NHX0 329 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 ZBTB39O15060 712 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 ASAP2O43150 1006 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 B4GALT5O43286 388 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 DKC1O60832 514 aaKnown RBP eCLIP11.01□□□□□ -0.65
CLCN4-204ENST00000454850 C1RP00736 705 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 HNRNPA1P09651 372 aaKnown RBP eCLIP11.01□□□□□ -0.65
CLCN4-204ENST00000454850 IFNAR1P17181 557 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 ARF4P18085 180 aaPredicted RBP11.01□□□□□ -0.65
CLCN4-204ENST00000454850 CYP3A7P24462 503 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 AXLP30530 894 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 YWHABP31946 246 aaKnown RBP11.01□□□□□ -0.65
CLCN4-204ENST00000454850 MAGEA9P43362 315 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 GRIK3Q13003 919 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 HSP90AA2PQ14568 343 aaPredicted RBP11.01□□□□□ -0.65
CLCN4-204ENST00000454850 INF2Q27J81 1249 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 TSGA10IPQ3SY00 556 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 FAM171A1Q5VUB5 890 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 NCAPH2Q6IBW4 605 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 NPAS3Q8IXF0 933 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 BLIDQ8IZY5 108 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 ZBTB44Q8NCP5 570 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 SLC7A14Q8TBB6 771 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 CHAMP1Q96JM3 812 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 MTRQ99707 1265 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 CLSTN3Q9BQT9 956 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 RTKNQ9BST9 563 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 TTPALQ9BTX7 342 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 C22orf23Q9BZE7 217 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 OSBPL6Q9BZF3 934 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 SH3GLB2Q9NR46 395 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 RGL1Q9NZL6 768 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 VAV3Q9UKW4 847 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 RAB23Q9ULC3 237 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 NDRG2Q9UN36 371 aaKnown RBP11.01□□□□□ -0.65
CLCN4-204ENST00000454850 ATRXP46100 2492 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 LAMA1P25391 3075 aa11.01□□□□□ -0.65
CLCN4-204ENST00000454850 ADAM12O43184 909 aa11□□□□□ -0.65
CLCN4-204ENST00000454850 LILRB5O75023 590 aa11□□□□□ -0.65
CLCN4-204ENST00000454850 KIF4AO95239 1232 aa11□□□□□ -0.65
CLCN4-204ENST00000454850 P4HBP07237 508 aaKnown RBP11□□□□□ -0.65
CLCN4-204ENST00000454850 PTENP60484 403 aa11□□□□□ -0.65
CLCN4-204ENST00000454850 CYP4A11Q02928 519 aa11□□□□□ -0.65
CLCN4-204ENST00000454850 MBTD1Q05BQ5 628 aa11□□□□□ -0.65
CLCN4-204ENST00000454850 SPEM2Q0P670 501 aa11□□□□□ -0.65
CLCN4-204ENST00000454850 MTAPQ13126 283 aa11□□□□□ -0.65
CLCN4-204ENST00000454850 PPP2R5CQ13362 524 aa11□□□□□ -0.65
CLCN4-204ENST00000454850 CAPSQ13938 189 aa11□□□□□ -0.65
CLCN4-204ENST00000454850 TFDP1Q14186 410 aa11□□□□□ -0.65
CLCN4-204ENST00000454850 CTTNQ14247 550 aaKnown RBP11□□□□□ -0.65
CLCN4-204ENST00000454850 PABPC1LQ4VXU2 614 aaKnown RBP11□□□□□ -0.65
CLCN4-204ENST00000454850 PPM1JQ5JR12 505 aa11□□□□□ -0.65
CLCN4-204ENST00000454850 BLOC1S2Q6QNY1 142 aa11□□□□□ -0.65
CLCN4-204ENST00000454850 RSPO2Q6UXX9 243 aaPredicted RBP11□□□□□ -0.65
CLCN4-204ENST00000454850 SKAP1Q86WV1 359 aa11□□□□□ -0.65
CLCN4-204ENST00000454850 GPR65Q8IYL9 337 aa11□□□□□ -0.65
CLCN4-204ENST00000454850 GSTCDQ8NEC7 633 aa11□□□□□ -0.65
CLCN4-204ENST00000454850 ASAP3Q8TDY4 903 aa11□□□□□ -0.65
CLCN4-204ENST00000454850 DYDC2Q96IM9 177 aa11□□□□□ -0.65
CLCN4-204ENST00000454850 XPNPEP1Q9NQW7 623 aa11□□□□□ -0.65
CLCN4-204ENST00000454850 PRMT8Q9NR22 394 aaPredicted RBP11□□□□□ -0.65
CLCN4-204ENST00000454850 HEBP1Q9NRV9 189 aa11□□□□□ -0.65
CLCN4-204ENST00000454850 PPME1Q9Y570 386 aa11□□□□□ -0.65
CLCN4-204ENST00000454850 DYNC1LI1Q9Y6G9 523 aaKnown RBP11□□□□□ -0.65
CLCN4-204ENST00000454850 COL4A2P08572 1712 aa11□□□□□ -0.65
CLCN4-204ENST00000454850 GREB1Q4ZG55 1949 aa10.99□□□□□ -0.65
CLCN4-204ENST00000454850 NCAM2O15394 837 aa10.99□□□□□ -0.65
CLCN4-204ENST00000454850 MARCH6O60337 910 aa10.99□□□□□ -0.65
CLCN4-204ENST00000454850 TBC1D4O60343 1298 aa10.99□□□□□ -0.65
CLCN4-204ENST00000454850 ADRB1P08588 477 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms