RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 GAS8O95995 478 aa11.95□□□□□ -0.5
DDR1-240ENST00000454612 PSMC4P43686 418 aa11.95□□□□□ -0.5
DDR1-240ENST00000454612 LIN9Q5TKA1 542 aa11.95□□□□□ -0.5
DDR1-240ENST00000454612 LRRC71Q8N4P6 559 aa11.95□□□□□ -0.5
DDR1-240ENST00000454612 EPS8L3Q8TE67 593 aaKnown RBP11.95□□□□□ -0.5
DDR1-240ENST00000454612 ZBTB45Q96K62 511 aaPredicted RBP11.95□□□□□ -0.5
DDR1-240ENST00000454612 CCDC77Q9BR77 488 aa11.95□□□□□ -0.5
DDR1-240ENST00000454612 SEMA4AQ9H3S1 761 aa11.95□□□□□ -0.5
DDR1-240ENST00000454612 COL24A1Q17RW2 1714 aa11.95□□□□□ -0.5
DDR1-240ENST00000454612 F8VZ95 297 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 WEE2P0C1S8 567 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 KRT10P13645 584 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 PAX7P23759 505 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 MMP14P50281 582 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 PMS2P54278 862 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 MTMR3Q13615 1198 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 SMTNL2Q2TAL5 461 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 FAM163AQ96GL9 167 aaPredicted RBP11.94□□□□□ -0.5
DDR1-240ENST00000454612 TARS2Q9BW92 718 aaKnown RBP11.94□□□□□ -0.5
DDR1-240ENST00000454612 ANAPC5Q9UJX4 755 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 KLRG2A4D1S0 409 aaPredicted RBP11.94□□□□□ -0.5
DDR1-240ENST00000454612 AGPSO00116 658 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 SMIM24O75264 130 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 FIGNQ5HY92 759 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 NBPF12Q5TAG4 269 aaPredicted RBP11.94□□□□□ -0.5
DDR1-240ENST00000454612 MCF2L2Q86YR7 1114 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 C7orf31Q8N865 590 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 SLC7A3Q8WY07 619 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 MSTO1Q9BUK6 570 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 FAM114A2Q9NRY5 505 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 WRAP73Q9P2S5 460 aaPredicted RBP11.94□□□□□ -0.5
DDR1-240ENST00000454612 ASTN1O14525 1302 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 RPS6KA5O75582 802 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 GRAP2O75791 330 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 SESN3P58005 492 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 IRF2BP2Q7Z5L9 587 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 JAMLQ86YT9 394 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 LNX1Q8TBB1 728 aaPredicted RBP11.94□□□□□ -0.5
DDR1-240ENST00000454612 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.94□□□□□ -0.5
DDR1-240ENST00000454612 ZNF473Q8WTR7 871 aaKnown RBP11.94□□□□□ -0.5
DDR1-240ENST00000454612 PRMT1Q99873 361 aaKnown RBP11.94□□□□□ -0.5
DDR1-240ENST00000454612 MXRA8Q9BRK3 442 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 TMEM206Q9H813 350 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 KCNMB3Q9NPA1 279 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 RNF14Q9UBS8 474 aa11.94□□□□□ -0.5
DDR1-240ENST00000454612 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.93□□□□□ -0.5
DDR1-240ENST00000454612 ANKRD63C9JTQ0 380 aa11.93□□□□□ -0.5
DDR1-240ENST00000454612 ITGB5P18084 799 aa11.93□□□□□ -0.5
DDR1-240ENST00000454612 MDH1P40925 334 aaKnown RBP11.93□□□□□ -0.5
DDR1-240ENST00000454612 RWDD2BP57060 319 aa11.93□□□□□ -0.5
DDR1-240ENST00000454612 AENQ8WTP8 325 aaKnown RBP11.93□□□□□ -0.5
DDR1-240ENST00000454612 POLR3FQ9H1D9 316 aaPredicted RBP11.93□□□□□ -0.5
DDR1-240ENST00000454612 NEUROG2Q9H2A3 272 aa11.93□□□□□ -0.5
DDR1-240ENST00000454612 ASTN2O75129 1339 aaPredicted RBP11.93□□□□□ -0.5
DDR1-240ENST00000454612 IGSF9BQ9UPX0 1349 aa11.93□□□□□ -0.5
DDR1-240ENST00000454612 NUMBP49757 651 aa11.93□□□□□ -0.5
DDR1-240ENST00000454612 IFI35P80217 286 aaPredicted RBP11.93□□□□□ -0.5
DDR1-240ENST00000454612 LACTBP83111 547 aaPredicted RBP11.93□□□□□ -0.5
DDR1-240ENST00000454612 GNPTABQ3T906 1256 aa11.93□□□□□ -0.5
DDR1-240ENST00000454612 ZNF449Q6P9G9 518 aa11.93□□□□□ -0.5
DDR1-240ENST00000454612 ANKMY2Q8IV38 441 aa11.93□□□□□ -0.5
DDR1-240ENST00000454612 RTKN2Q8IZC4 609 aa11.93□□□□□ -0.5
DDR1-240ENST00000454612 RNF217Q8TC41 542 aa11.93□□□□□ -0.5
DDR1-240ENST00000454612 GANQ9H2C0 597 aa11.93□□□□□ -0.5
DDR1-240ENST00000454612 TTLL3Q9Y4R7 772 aa11.93□□□□□ -0.5
DDR1-240ENST00000454612 PASKQ96RG2 1323 aa11.93□□□□□ -0.5
DDR1-240ENST00000454612 SHBGP04278 402 aa11.93□□□□□ -0.5
DDR1-240ENST00000454612 NR3C2P08235 984 aa11.93□□□□□ -0.5
DDR1-240ENST00000454612 TMEM191BP0C7N4 346 aa11.93□□□□□ -0.5
DDR1-240ENST00000454612 RANBP1P43487 201 aa11.93□□□□□ -0.5
DDR1-240ENST00000454612 ZNF131P52739 623 aa11.93□□□□□ -0.5
DDR1-240ENST00000454612 LAMB2P55268 1798 aa11.93□□□□□ -0.5
DDR1-240ENST00000454612 ETNPPLQ8TBG4 499 aa11.93□□□□□ -0.5
DDR1-240ENST00000454612 LRRN4Q8WUT4 740 aa11.93□□□□□ -0.5
DDR1-240ENST00000454612 KAT2BQ92831 832 aa11.93□□□□□ -0.5
DDR1-240ENST00000454612 TCRBV7S2A1N4TA0A589 114 aa11.92□□□□□ -0.5
DDR1-240ENST00000454612 GMNCA6NCL1 334 aa11.92□□□□□ -0.5
DDR1-240ENST00000454612 CHN1P15882 459 aa11.92□□□□□ -0.5
DDR1-240ENST00000454612 PPP2R2AP63151 447 aa11.92□□□□□ -0.5
DDR1-240ENST00000454612 BBS9Q3SYG4 887 aa11.92□□□□□ -0.5
DDR1-240ENST00000454612 KRT39Q6A163 491 aa11.92□□□□□ -0.5
DDR1-240ENST00000454612 RSBN1LQ6PCB5 846 aaPredicted RBP11.92□□□□□ -0.5
DDR1-240ENST00000454612 KIF2BQ8N4N8 673 aa11.92□□□□□ -0.5
DDR1-240ENST00000454612 PSMD1Q99460 953 aa11.92□□□□□ -0.5
DDR1-240ENST00000454612 SPDYE2BA6NHP3 402 aa11.92□□□□□ -0.5
DDR1-240ENST00000454612 WDR64B1ANS9 1081 aa11.92□□□□□ -0.5
DDR1-240ENST00000454612 KRT1P04264 644 aa11.92□□□□□ -0.5
DDR1-240ENST00000454612 SPDYE6P0CI01 402 aa11.92□□□□□ -0.5
DDR1-240ENST00000454612 PYGMP11217 842 aa11.92□□□□□ -0.5
DDR1-240ENST00000454612 KRT17Q04695 432 aa11.92□□□□□ -0.5
DDR1-240ENST00000454612 KCNT1Q5JUK3 1230 aa11.92□□□□□ -0.5
DDR1-240ENST00000454612 CASC4Q6P4E1 433 aa11.92□□□□□ -0.5
DDR1-240ENST00000454612 ILDR2Q71H61 639 aa11.92□□□□□ -0.5
DDR1-240ENST00000454612 ALG3Q92685 438 aa11.92□□□□□ -0.5
DDR1-240ENST00000454612 ERVK-5Q9HDB9 667 aa11.92□□□□□ -0.5
DDR1-240ENST00000454612 SAYSD1Q9NPB0 183 aa11.92□□□□□ -0.5
DDR1-240ENST00000454612 PITPNM2Q9BZ72 1349 aa11.92□□□□□ -0.5
DDR1-240ENST00000454612 SMARCA1P28370 1054 aa11.92□□□□□ -0.5
DDR1-240ENST00000454612 TGFB2P61812 414 aa11.92□□□□□ -0.5
DDR1-240ENST00000454612 CXCL9Q07325 125 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms