RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 CDT1Q9H211 546 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 FAM124BQ9H5Z6 455 aaPredicted RBP5.44□□□□□ -1.54
RIF1-207ENST00000454583 CWH43Q9H720 699 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 SLC39A2Q9NP94 309 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 DERAQ9Y315 318 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 COL27A1Q8IZC6 1860 aaPredicted RBP5.44□□□□□ -1.54
RIF1-207ENST00000454583 TMEM189-UBE2V1I3L0A0 370 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 MAGEB2O15479 319 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 ASAP2O43150 1006 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 ABL1P00519 1130 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 PFKMP08237 780 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 H2AFXP16104 143 aaPredicted RBP5.44□□□□□ -1.54
RIF1-207ENST00000454583 PPP1R2P41236 205 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 PRKCIP41743 596 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 EPHB4P54760 987 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 SOX4Q06945 474 aaPredicted RBP5.44□□□□□ -1.54
RIF1-207ENST00000454583 NCBP1Q09161 790 aaKnown RBP5.44□□□□□ -1.54
RIF1-207ENST00000454583 INCA1Q0VD86 236 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 ZACNQ401N2 412 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 FAM26FQ5R3K3 315 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 KIAA0319Q5VV43 1072 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 SLC17A8Q8NDX2 589 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 KBTBD7Q8WVZ9 684 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 TMEM143Q96AN5 459 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 VOPP1Q96AW1 172 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 EIF2AQ9BY44 585 aaKnown RBP5.44□□□□□ -1.54
RIF1-207ENST00000454583 SDCBP2Q9H190 292 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 ELAC1Q9H777 363 aaKnown RBP5.44□□□□□ -1.54
RIF1-207ENST00000454583 SETD4Q9NVD3 440 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 MIOSQ9NXC5 875 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 IFNKQ9P0W0 207 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 NAP1L2Q9ULW6 460 aaPredicted RBP5.44□□□□□ -1.54
RIF1-207ENST00000454583 NOC2LQ9Y3T9 749 aaKnown RBP5.44□□□□□ -1.54
RIF1-207ENST00000454583 COL4A3BPQ9Y5P4 624 aa5.44□□□□□ -1.54
RIF1-207ENST00000454583 MEIS3P2A8K0S8 358 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 SFI1A8K8P3 1242 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 GABRDO14764 452 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 MFAP3LO75121 409 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 TPM2P07951 284 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 CHRNB2P17787 502 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 CNGA1P29973 690 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 FXR1P51114 621 aaKnown RBP eCLIP5.43□□□□□ -1.54
RIF1-207ENST00000454583 MRPS6P82932 125 aaKnown RBP5.43□□□□□ -1.54
RIF1-207ENST00000454583 MXD4Q14582 209 aaPredicted RBP5.43□□□□□ -1.54
RIF1-207ENST00000454583 PPP2R5AQ15172 486 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 CLLU1OSQ5K130 101 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 TDRD10Q5VZ19 366 aaKnown RBP5.43□□□□□ -1.54
RIF1-207ENST00000454583 FAM160B1Q5W0V3 765 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 PHLDB3Q6NSJ2 640 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 EFCAB12Q6NXP0 572 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 AGMOQ6ZNB7 445 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 EEPD1Q7L9B9 569 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 BRSK2Q8IWQ3 736 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 DRC7Q8IY82 874 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 DRC1Q96MC2 740 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 KREMEN1Q96MU8 473 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 CASD1Q96PB1 797 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 RAB34Q9BZG1 259 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 XPNPEP3Q9NQH7 507 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 TRMT13Q9NUP7 481 aaKnown RBP5.43□□□□□ -1.54
RIF1-207ENST00000454583 ZNF446Q9NWS9 450 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 TSKSQ9UJT2 592 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 PLAGL2Q9UPG8 496 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 DDX39AO00148 427 aaKnown RBP5.43□□□□□ -1.54
RIF1-207ENST00000454583 PRPF6O94906 941 aaKnown RBP5.43□□□□□ -1.54
RIF1-207ENST00000454583 CYP3A5P20815 502 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 PON1P27169 355 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 UBA7P41226 1012 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 AFMP43652 599 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 GSDMDP57764 484 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 PAK1Q13153 545 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 PPP1R15BQ5SWA1 713 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.43□□□□□ -1.54
RIF1-207ENST00000454583 PDILTQ8N807 584 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 CCDC150Q8NCX0 1101 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 C3orf58Q8NDZ4 430 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 ERMNQ8TAM6 284 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 BCL7CQ8WUZ0 217 aaPredicted RBP5.43□□□□□ -1.54
RIF1-207ENST00000454583 SMARCE1Q969G3 411 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 CALML4Q96GE6 196 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 MCOLN1Q9GZU1 580 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 TMEM117Q9H0C3 514 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 MRPL44Q9H9J2 332 aaKnown RBP5.43□□□□□ -1.54
RIF1-207ENST00000454583 POLD4Q9HCU8 107 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 RMND1Q9NWS8 449 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 AIPL1Q9NZN9 384 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 DAAM1Q9Y4D1 1078 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 SHROOM3Q8TF72 1996 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 MROH7Q68CQ1 1323 aa5.43□□□□□ -1.54
RIF1-207ENST00000454583 SMTNL1A8MU46 457 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 HAX1O00165 279 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 FSCN2O14926 492 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 P4HA2O15460 535 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 CHMP2AO43633 222 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 STX10O60499 249 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 ZRANB2O95218 330 aaKnown RBP eCLIP5.42□□□□□ -1.541e-10■■■■■ 129.2
RIF1-207ENST00000454583 NR3C1P04150 777 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 MCF2P10911 925 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 EIF4BP23588 611 aaKnown RBP5.42□□□□□ -1.54
RIF1-207ENST00000454583 ABCD1P33897 745 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms