RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 ELMSAN1Q6PJG2 1045 aa11.74□□□□□ -0.53
DDX39A-203ENST00000454233 RNF135Q8IUD6 432 aa11.74□□□□□ -0.53
DDX39A-203ENST00000454233 SLC22A17Q8WUG5 538 aa11.74□□□□□ -0.53
DDX39A-203ENST00000454233 RIPOR3Q96MK2 946 aa11.74□□□□□ -0.53
DDX39A-203ENST00000454233 NECTIN4Q96NY8 510 aa11.74□□□□□ -0.53
DDX39A-203ENST00000454233 LRFN3Q9BTN0 628 aa11.74□□□□□ -0.53
DDX39A-203ENST00000454233 CCDC94Q9BW85 323 aaPredicted RBP11.74□□□□□ -0.53
DDX39A-203ENST00000454233 ADAM7Q9H2U9 754 aa11.74□□□□□ -0.53
DDX39A-203ENST00000454233 ARHGAP28Q9P2N2 729 aa11.74□□□□□ -0.53
DDX39A-203ENST00000454233 ADAM28Q9UKQ2 775 aa11.74□□□□□ -0.53
DDX39A-203ENST00000454233 FAM86C2PA6NEL3 165 aa11.73□□□□□ -0.53
DDX39A-203ENST00000454233 SFI1A8K8P3 1242 aa11.73□□□□□ -0.53
DDX39A-203ENST00000454233 H0YCG3 227 aa11.73□□□□□ -0.53
DDX39A-203ENST00000454233 PTGESO14684 152 aa11.73□□□□□ -0.53
DDX39A-203ENST00000454233 SLC16A4O15374 487 aa11.73□□□□□ -0.53
DDX39A-203ENST00000454233 LILRB3O75022 631 aa11.73□□□□□ -0.53
DDX39A-203ENST00000454233 SF3B1O75533 1304 aaKnown RBP eCLIP11.73□□□□□ -0.531e-6■■■■■ 49.9
DDX39A-203ENST00000454233 PLS3P13797 630 aa11.73□□□□□ -0.53
DDX39A-203ENST00000454233 SYT1P21579 422 aa11.73□□□□□ -0.53
DDX39A-203ENST00000454233 YARSP54577 528 aaKnown RBP11.73□□□□□ -0.53
DDX39A-203ENST00000454233 SLC12A3P55017 1021 aa11.73□□□□□ -0.53
DDX39A-203ENST00000454233 DSG1Q02413 1049 aa11.73□□□□□ -0.53
DDX39A-203ENST00000454233 HSP90AA2PQ14568 343 aaPredicted RBP11.73□□□□□ -0.53
DDX39A-203ENST00000454233 USP41Q3LFD5 358 aa11.73□□□□□ -0.53
DDX39A-203ENST00000454233 ZNF568Q3ZCX4 644 aa11.73□□□□□ -0.53
DDX39A-203ENST00000454233 FUT10Q6P4F1 479 aa11.73□□□□□ -0.53
DDX39A-203ENST00000454233 TAS1R1Q7RTX1 841 aa11.73□□□□□ -0.53
DDX39A-203ENST00000454233 RNF168Q8IYW5 571 aaPredicted RBP11.73□□□□□ -0.53
DDX39A-203ENST00000454233 SPIRE2Q8WWL2 714 aa11.73□□□□□ -0.53
DDX39A-203ENST00000454233 FBXL18Q96ME1 805 aa11.73□□□□□ -0.53
DDX39A-203ENST00000454233 ACO2Q99798 780 aaKnown RBP11.73□□□□□ -0.53
DDX39A-203ENST00000454233 NTPCRQ9BSD7 190 aaKnown RBP11.73□□□□□ -0.53
DDX39A-203ENST00000454233 TCHPQ9BT92 498 aa11.73□□□□□ -0.53
DDX39A-203ENST00000454233 TOPORSQ9NS56 1045 aaPredicted RBP11.73□□□□□ -0.53
DDX39A-203ENST00000454233 LARSQ9P2J5 1176 aaKnown RBP11.73□□□□□ -0.53
DDX39A-203ENST00000454233 DPP7Q9UHL4 492 aa11.73□□□□□ -0.53
DDX39A-203ENST00000454233 MUTYHQ9UIF7 546 aa11.73□□□□□ -0.53
DDX39A-203ENST00000454233 NR2E1Q9Y466 385 aa11.73□□□□□ -0.53
DDX39A-203ENST00000454233 CASTOR2A6NHX0 329 aa11.72□□□□□ -0.53
DDX39A-203ENST00000454233 F8W810 466 aa11.72□□□□□ -0.53
DDX39A-203ENST00000454233 EFEMP2O95967 443 aa11.72□□□□□ -0.53
DDX39A-203ENST00000454233 KRT18P05783 430 aaKnown RBP11.72□□□□□ -0.53
DDX39A-203ENST00000454233 MCF2P10911 925 aa11.72□□□□□ -0.53
DDX39A-203ENST00000454233 GRM5P41594 1212 aa11.72□□□□□ -0.53
DDX39A-203ENST00000454233 CLCN4P51793 760 aa11.72□□□□□ -0.53
DDX39A-203ENST00000454233 CREMQ03060 361 aa11.72□□□□□ -0.53
DDX39A-203ENST00000454233 ELAVL2Q12926 359 aaKnown RBP11.72□□□□□ -0.53
DDX39A-203ENST00000454233 DHX8Q14562 1220 aaKnown RBP11.72□□□□□ -0.53
DDX39A-203ENST00000454233 HERC4Q5GLZ8 1057 aaPredicted RBP11.72□□□□□ -0.53
DDX39A-203ENST00000454233 ATAT1Q5SQI0 421 aa11.72□□□□□ -0.53
DDX39A-203ENST00000454233 KIAA0319Q5VV43 1072 aa11.72□□□□□ -0.53
DDX39A-203ENST00000454233 MPZL3Q6UWV2 235 aa11.72□□□□□ -0.53
DDX39A-203ENST00000454233 TAS1R3Q7RTX0 852 aa11.72□□□□□ -0.53
DDX39A-203ENST00000454233 ZBTB33Q86T24 672 aa11.72□□□□□ -0.53
DDX39A-203ENST00000454233 GPBP1Q86WP2 473 aa11.72□□□□□ -0.53
DDX39A-203ENST00000454233 GPR65Q8IYL9 337 aa11.72□□□□□ -0.53
DDX39A-203ENST00000454233 C12orf76Q8N812 135 aaPredicted RBP11.72□□□□□ -0.53
DDX39A-203ENST00000454233 RABGGTAQ92696 567 aa11.72□□□□□ -0.53
DDX39A-203ENST00000454233 TARS2Q9BW92 718 aaKnown RBP11.72□□□□□ -0.53
DDX39A-203ENST00000454233 GPR62Q9BZJ7 368 aa11.72□□□□□ -0.53
DDX39A-203ENST00000454233 CDT1Q9H211 546 aa11.72□□□□□ -0.53
DDX39A-203ENST00000454233 SFXN1Q9H9B4 322 aa11.72□□□□□ -0.53
DDX39A-203ENST00000454233 RXFP1Q9HBX9 757 aa11.72□□□□□ -0.53
DDX39A-203ENST00000454233 TSHZ2Q9NRE2 1034 aa11.72□□□□□ -0.53
DDX39A-203ENST00000454233 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.72□□□□□ -0.53
DDX39A-203ENST00000454233 CHST7Q9NS84 486 aa11.72□□□□□ -0.53
DDX39A-203ENST00000454233 FOXD4L1Q9NU39 408 aa11.72□□□□□ -0.53
DDX39A-203ENST00000454233 ODF2LQ9ULJ1 636 aa11.72□□□□□ -0.53
DDX39A-203ENST00000454233 NPHP3-ACAD11A0A0J9YXS1 232 aa11.71□□□□□ -0.53
DDX39A-203ENST00000454233 PRR33A8MZF0 331 aa11.71□□□□□ -0.53
DDX39A-203ENST00000454233 TEX28O15482 410 aa11.71□□□□□ -0.53
DDX39A-203ENST00000454233 FAM13AO94988 1023 aa11.71□□□□□ -0.53
DDX39A-203ENST00000454233 GLUD1P00367 558 aa11.71□□□□□ -0.53
DDX39A-203ENST00000454233 PLCG1P19174 1290 aa11.71□□□□□ -0.53
DDX39A-203ENST00000454233 SP100P23497 879 aaPredicted RBP11.71□□□□□ -0.53
DDX39A-203ENST00000454233 OSTNP61366 133 aa11.71□□□□□ -0.53
DDX39A-203ENST00000454233 CACNB1Q02641 598 aaPredicted RBP11.71□□□□□ -0.53
DDX39A-203ENST00000454233 GRIN1Q05586 938 aa11.71□□□□□ -0.53
DDX39A-203ENST00000454233 RESTQ13127 1097 aa11.71□□□□□ -0.53
DDX39A-203ENST00000454233 KARSQ15046 597 aaKnown RBP11.71□□□□□ -0.53
DDX39A-203ENST00000454233 TMC5Q6UXY8 1006 aa11.71□□□□□ -0.53
DDX39A-203ENST00000454233 TMEM161BQ8NDZ6 487 aa11.71□□□□□ -0.53
DDX39A-203ENST00000454233 HASPINQ8TF76 798 aa11.71□□□□□ -0.53
DDX39A-203ENST00000454233 RIN2Q8WYP3 895 aaPredicted RBP11.71□□□□□ -0.53
DDX39A-203ENST00000454233 BICD1Q96G01 975 aa11.71□□□□□ -0.53
DDX39A-203ENST00000454233 UROC1Q96N76 676 aa11.71□□□□□ -0.53
DDX39A-203ENST00000454233 ACAP3Q96P50 834 aa11.71□□□□□ -0.53
DDX39A-203ENST00000454233 PAAF1Q9BRP4 392 aa11.71□□□□□ -0.53
DDX39A-203ENST00000454233 CCSER1Q9C0I3 900 aa11.71□□□□□ -0.53
DDX39A-203ENST00000454233 ZSCAN16Q9H4T2 348 aaPredicted RBP11.71□□□□□ -0.53
DDX39A-203ENST00000454233 POMKQ9H5K3 350 aa11.71□□□□□ -0.53
DDX39A-203ENST00000454233 PTPRHQ9HD43 1115 aa11.71□□□□□ -0.53
DDX39A-203ENST00000454233 C11orf16Q9NQ32 467 aa11.71□□□□□ -0.53
DDX39A-203ENST00000454233 FNIP2Q9P278 1114 aa11.71□□□□□ -0.53
DDX39A-203ENST00000454233 CACNG4Q9UBN1 327 aa11.71□□□□□ -0.53
DDX39A-203ENST00000454233 CCDC39Q9UFE4 941 aa11.71□□□□□ -0.53
DDX39A-203ENST00000454233 CLIC4Q9Y696 253 aa11.71□□□□□ -0.53
DDX39A-203ENST00000454233 MYH11P35749 1972 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 STX6O43752 255 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 TBCAO75347 108 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms