RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 BACH2Q9BYV9 841 aa18.1■□□□□ 0.49
NCKIPSD-208ENST00000454134 KMT5AQ9NQR1 393 aa18.1■□□□□ 0.49
NCKIPSD-208ENST00000454134 PHLPP2Q6ZVD8 1323 aa18.09■□□□□ 0.49
NCKIPSD-208ENST00000454134 SPDYE4A6NLX3 237 aa18.09■□□□□ 0.49
NCKIPSD-208ENST00000454134 SLC16A4O15374 487 aa18.09■□□□□ 0.49
NCKIPSD-208ENST00000454134 TEX28O15482 410 aa18.09■□□□□ 0.49
NCKIPSD-208ENST00000454134 TADA2AO75478 443 aa18.09■□□□□ 0.49
NCKIPSD-208ENST00000454134 GRIN1Q05586 938 aa18.09■□□□□ 0.49
NCKIPSD-208ENST00000454134 TUSC3Q13454 348 aa18.09■□□□□ 0.49
NCKIPSD-208ENST00000454134 HSP90AA2PQ14568 343 aaPredicted RBP18.09■□□□□ 0.49
NCKIPSD-208ENST00000454134 DCAF4L1Q3SXM0 396 aa18.09■□□□□ 0.49
NCKIPSD-208ENST00000454134 TAS1R3Q7RTX0 852 aa18.09■□□□□ 0.49
NCKIPSD-208ENST00000454134 BRAPQ7Z569 592 aa18.09■□□□□ 0.49
NCKIPSD-208ENST00000454134 SYT2Q8N9I0 419 aaPredicted RBP18.09■□□□□ 0.49
NCKIPSD-208ENST00000454134 TARS2Q9BW92 718 aaKnown RBP18.09■□□□□ 0.49
NCKIPSD-208ENST00000454134 NT5C3AQ9H0P0 336 aa18.09■□□□□ 0.49
NCKIPSD-208ENST00000454134 ARHGAP28Q9P2N2 729 aa18.09■□□□□ 0.49
NCKIPSD-208ENST00000454134 ADAM28Q9UKQ2 775 aa18.09■□□□□ 0.49
NCKIPSD-208ENST00000454134 NPHP3-ACAD11A0A0J9YXS1 232 aa18.08■□□□□ 0.48
NCKIPSD-208ENST00000454134 THP07101 528 aa18.08■□□□□ 0.48
NCKIPSD-208ENST00000454134 PLA2G4BP0C869 781 aa18.08■□□□□ 0.48
NCKIPSD-208ENST00000454134 GUCY2CP25092 1073 aa18.08■□□□□ 0.48
NCKIPSD-208ENST00000454134 MTHFRP42898 656 aa18.08■□□□□ 0.48
NCKIPSD-208ENST00000454134 SLC12A3P55017 1021 aa18.08■□□□□ 0.48
NCKIPSD-208ENST00000454134 DSG1Q02413 1049 aa18.08■□□□□ 0.48
NCKIPSD-208ENST00000454134 CACNB1Q02641 598 aaPredicted RBP18.08■□□□□ 0.48
NCKIPSD-208ENST00000454134 SF3A1Q15459 793 aaKnown RBP18.08■□□□□ 0.48
NCKIPSD-208ENST00000454134 TMEM119Q4V9L6 283 aa18.08■□□□□ 0.48
NCKIPSD-208ENST00000454134 GLRA4Q5JXX5 417 aa18.08■□□□□ 0.48
NCKIPSD-208ENST00000454134 ZBTB33Q86T24 672 aa18.08■□□□□ 0.48
NCKIPSD-208ENST00000454134 CEP120Q8N960 986 aa18.08■□□□□ 0.48
NCKIPSD-208ENST00000454134 EDAQ92838 391 aa18.08■□□□□ 0.48
NCKIPSD-208ENST00000454134 RIPOR3Q96MK2 946 aa18.08■□□□□ 0.48
NCKIPSD-208ENST00000454134 NECTIN4Q96NY8 510 aa18.08■□□□□ 0.48
NCKIPSD-208ENST00000454134 ACO2Q99798 780 aaKnown RBP18.08■□□□□ 0.48
NCKIPSD-208ENST00000454134 CDT1Q9H211 546 aa18.08■□□□□ 0.48
NCKIPSD-208ENST00000454134 TMEM134Q9H6X4 195 aa18.08■□□□□ 0.48
NCKIPSD-208ENST00000454134 CHST7Q9NS84 486 aa18.08■□□□□ 0.48
NCKIPSD-208ENST00000454134 TNFSF13BQ9Y275 285 aa18.08■□□□□ 0.48
NCKIPSD-208ENST00000454134 SSX2IPQ9Y2D8 614 aa18.08■□□□□ 0.48
NCKIPSD-208ENST00000454134 TRIOO75962 3097 aa18.07■□□□□ 0.48
NCKIPSD-208ENST00000454134 KIF4AO95239 1232 aa18.07■□□□□ 0.48
NCKIPSD-208ENST00000454134 ADH1AP07327 375 aa18.07■□□□□ 0.48
NCKIPSD-208ENST00000454134 OSTNP61366 133 aa18.07■□□□□ 0.48
NCKIPSD-208ENST00000454134 NAB2Q15742 525 aa18.07■□□□□ 0.48
NCKIPSD-208ENST00000454134 USP41Q3LFD5 358 aa18.07■□□□□ 0.48
NCKIPSD-208ENST00000454134 ZNF568Q3ZCX4 644 aa18.07■□□□□ 0.48
NCKIPSD-208ENST00000454134 ATAT1Q5SQI0 421 aa18.07■□□□□ 0.48
NCKIPSD-208ENST00000454134 GLYCTKQ8IVS8 523 aa18.07■□□□□ 0.48
NCKIPSD-208ENST00000454134 LRRC15Q8TF66 581 aa18.07■□□□□ 0.48
NCKIPSD-208ENST00000454134 RIN2Q8WYP3 895 aaPredicted RBP18.07■□□□□ 0.48
NCKIPSD-208ENST00000454134 AK8Q96MA6 479 aa18.07■□□□□ 0.48
NCKIPSD-208ENST00000454134 TIPINQ9BVW5 301 aa18.07■□□□□ 0.48
NCKIPSD-208ENST00000454134 MRPL4Q9BYD3 311 aaKnown RBP18.07■□□□□ 0.48
NCKIPSD-208ENST00000454134 SFXN1Q9H9B4 322 aa18.07■□□□□ 0.48
NCKIPSD-208ENST00000454134 RXFP1Q9HBX9 757 aa18.07■□□□□ 0.48
NCKIPSD-208ENST00000454134 MAN1C1Q9NR34 630 aa18.07■□□□□ 0.48
NCKIPSD-208ENST00000454134 FOXD4L1Q9NU39 408 aa18.07■□□□□ 0.48
NCKIPSD-208ENST00000454134 HCN4Q9Y3Q4 1203 aa18.07■□□□□ 0.48
NCKIPSD-208ENST00000454134 RBM19Q9Y4C8 960 aaKnown RBP18.07■□□□□ 0.48
NCKIPSD-208ENST00000454134 PLXNA3P51805 1871 aa18.07■□□□□ 0.48
NCKIPSD-208ENST00000454134 C2CD4DB7Z1M9 353 aa18.06■□□□□ 0.48
NCKIPSD-208ENST00000454134 SPATA31D3P0C874 917 aa18.06■□□□□ 0.48
NCKIPSD-208ENST00000454134 PLS3P13797 630 aa18.06■□□□□ 0.48
NCKIPSD-208ENST00000454134 RPL17P18621 184 aaKnown RBP18.06■□□□□ 0.48
NCKIPSD-208ENST00000454134 IGFBP6P24592 240 aaPredicted RBP18.06■□□□□ 0.48
NCKIPSD-208ENST00000454134 UBA7P41226 1012 aa18.06■□□□□ 0.48
NCKIPSD-208ENST00000454134 ZXDAP98168 799 aa18.06■□□□□ 0.48
NCKIPSD-208ENST00000454134 DHX8Q14562 1220 aaKnown RBP18.06■□□□□ 0.48
NCKIPSD-208ENST00000454134 ARSHQ5FYA8 562 aa18.06■□□□□ 0.48
NCKIPSD-208ENST00000454134 PRSS55Q6UWB4 352 aaPredicted RBP18.06■□□□□ 0.48
NCKIPSD-208ENST00000454134 SPATA31D4Q6ZUB0 917 aa18.06■□□□□ 0.48
NCKIPSD-208ENST00000454134 HFE2Q6ZVN8 426 aa18.06■□□□□ 0.48
NCKIPSD-208ENST00000454134 APBB1IPQ7Z5R6 666 aaPredicted RBP18.06■□□□□ 0.48
NCKIPSD-208ENST00000454134 PALB2Q86YC2 1186 aa18.06■□□□□ 0.48
NCKIPSD-208ENST00000454134 C17orf75Q9HAS0 396 aa18.06■□□□□ 0.48
NCKIPSD-208ENST00000454134 PTPRHQ9HD43 1115 aa18.06■□□□□ 0.48
NCKIPSD-208ENST00000454134 NR2E1Q9Y466 385 aa18.06■□□□□ 0.48
NCKIPSD-208ENST00000454134 SF3B1O75533 1304 aaKnown RBP eCLIP18.05■□□□□ 0.481e-8■■■■■ 103.4
NCKIPSD-208ENST00000454134 BMP15O95972 392 aa18.05■□□□□ 0.48
NCKIPSD-208ENST00000454134 GLUD1P00367 558 aa18.05■□□□□ 0.48
NCKIPSD-208ENST00000454134 HARSP12081 509 aaKnown RBP18.05■□□□□ 0.48
NCKIPSD-208ENST00000454134 PDCP20941 246 aa18.05■□□□□ 0.48
NCKIPSD-208ENST00000454134 GRM5P41594 1212 aa18.05■□□□□ 0.48
NCKIPSD-208ENST00000454134 RTP2Q5QGT7 225 aa18.05■□□□□ 0.48
NCKIPSD-208ENST00000454134 FAM173BQ6P4H8 233 aa18.05■□□□□ 0.48
NCKIPSD-208ENST00000454134 GPR149Q86SP6 731 aa18.05■□□□□ 0.48
NCKIPSD-208ENST00000454134 CEP57Q86XR8 500 aa18.05■□□□□ 0.48
NCKIPSD-208ENST00000454134 KCTD17Q8N5Z5 321 aa18.05■□□□□ 0.48
NCKIPSD-208ENST00000454134 SPIRE2Q8WWL2 714 aa18.05■□□□□ 0.48
NCKIPSD-208ENST00000454134 CALML4Q96GE6 196 aa18.05■□□□□ 0.48
NCKIPSD-208ENST00000454134 ZBTB45Q96K62 511 aaPredicted RBP18.05■□□□□ 0.48
NCKIPSD-208ENST00000454134 PPP1R10Q96QC0 940 aaKnown RBP18.05■□□□□ 0.48
NCKIPSD-208ENST00000454134 NTPCRQ9BSD7 190 aaKnown RBP18.05■□□□□ 0.48
NCKIPSD-208ENST00000454134 TCHPQ9BT92 498 aa18.05■□□□□ 0.48
NCKIPSD-208ENST00000454134 CCDC94Q9BW85 323 aaPredicted RBP18.05■□□□□ 0.48
NCKIPSD-208ENST00000454134 CLIC4Q9Y696 253 aa18.05■□□□□ 0.48
NCKIPSD-208ENST00000454134 ABLIM1O14639 778 aa18.04■□□□□ 0.48
NCKIPSD-208ENST00000454134 PLCG1P19174 1290 aa18.04■□□□□ 0.48
NCKIPSD-208ENST00000454134 SYT1P21579 422 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms