RNA–Protein interactions for RNA: ENST00000453996.6

CTU2-202, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-202ENST00000453996 FAM189A1O60320 539 aa23.12■■□□□ 1.29
CTU2-202ENST00000453996 SOX5P35711 763 aa23.12■■□□□ 1.29
CTU2-202ENST00000453996 VAV2P52735 878 aa23.12■■□□□ 1.29
CTU2-202ENST00000453996 ENOX2Q16206 610 aaKnown RBP23.12■■□□□ 1.29
CTU2-202ENST00000453996 SV2AQ7L0J3 742 aa23.12■■□□□ 1.29
CTU2-202ENST00000453996 KIAA0319LQ8IZA0 1049 aa23.12■■□□□ 1.29
CTU2-202ENST00000453996 JAKMIP2Q96AA8 810 aa23.12■■□□□ 1.29
CTU2-202ENST00000453996 CFHR5Q9BXR6 569 aa23.12■■□□□ 1.29
CTU2-202ENST00000453996 IFIH1Q9BYX4 1025 aaKnown RBP23.12■■□□□ 1.29
CTU2-202ENST00000453996 PDE11AQ9HCR9 933 aa23.12■■□□□ 1.29
CTU2-202ENST00000453996 TNNI1P19237 187 aa23.11■■□□□ 1.29
CTU2-202ENST00000453996 GPC3P51654 580 aa23.11■■□□□ 1.29
CTU2-202ENST00000453996 ZNF568Q3ZCX4 644 aa23.11■■□□□ 1.29
CTU2-202ENST00000453996 ZNF410Q86VK4 478 aa23.11■■□□□ 1.29
CTU2-202ENST00000453996 ARHGEF19Q8IW93 802 aa23.11■■□□□ 1.29
CTU2-202ENST00000453996 BRSK2Q8IWQ3 736 aa23.11■■□□□ 1.29
CTU2-202ENST00000453996 SCLT1Q96NL6 688 aa23.11■■□□□ 1.29
CTU2-202ENST00000453996 CGRRF1Q99675 332 aa23.11■■□□□ 1.29
CTU2-202ENST00000453996 PTPRHQ9HD43 1115 aa23.11■■□□□ 1.29
CTU2-202ENST00000453996 UBE2TQ9NPD8 197 aaPredicted RBP23.11■■□□□ 1.29
CTU2-202ENST00000453996 TNFSF13BQ9Y275 285 aa23.11■■□□□ 1.29
CTU2-202ENST00000453996 CNTNAP2Q9UHC6 1331 aa23.11■■□□□ 1.29
CTU2-202ENST00000453996 RBAK-RBAKDNI3L0D1 243 aa23.1■■□□□ 1.29
CTU2-202ENST00000453996 IQCF3P0C7M6 154 aa23.1■■□□□ 1.29
CTU2-202ENST00000453996 TERF1P54274 439 aa23.1■■□□□ 1.29
CTU2-202ENST00000453996 WNT7BP56706 349 aa23.1■■□□□ 1.29
CTU2-202ENST00000453996 GFPT1Q06210 699 aaPredicted RBP23.1■■□□□ 1.29
CTU2-202ENST00000453996 C15orf39Q6ZRI6 1047 aa23.1■■□□□ 1.29
CTU2-202ENST00000453996 TAS1R2Q8TE23 839 aa23.1■■□□□ 1.29
CTU2-202ENST00000453996 SEMA4DQ92854 862 aa23.1■■□□□ 1.29
CTU2-202ENST00000453996 GPR88Q9GZN0 384 aa23.1■■□□□ 1.29
CTU2-202ENST00000453996 RAB20Q9NX57 234 aa23.1■■□□□ 1.29
CTU2-202ENST00000453996 PCDHA13Q9Y5I0 950 aa23.1■■□□□ 1.29
CTU2-202ENST00000453996 MBLAC1A4D2B0 266 aaPredicted RBP23.09■■□□□ 1.29
CTU2-202ENST00000453996 KRT86O43790 486 aa23.09■■□□□ 1.29
CTU2-202ENST00000453996 LRRN2O75325 713 aa23.09■■□□□ 1.29
CTU2-202ENST00000453996 GFPT2O94808 682 aa23.09■■□□□ 1.29
CTU2-202ENST00000453996 ANXA13P27216 316 aa23.09■■□□□ 1.29
CTU2-202ENST00000453996 PTK2Q05397 1052 aa23.09■■□□□ 1.29
CTU2-202ENST00000453996 ARHGAP44Q17R89 818 aa23.09■■□□□ 1.29
CTU2-202ENST00000453996 SEZ6Q53EL9 994 aa23.09■■□□□ 1.29
CTU2-202ENST00000453996 CCDC122Q5T0U0 273 aa23.09■■□□□ 1.29
CTU2-202ENST00000453996 TXLNBQ8N3L3 684 aa23.09■■□□□ 1.29
CTU2-202ENST00000453996 ZNF516Q92618 1163 aa23.09■■□□□ 1.29
CTU2-202ENST00000453996 WDR24Q96S15 920 aa23.09■■□□□ 1.29
CTU2-202ENST00000453996 IRX2Q9BZI1 471 aaPredicted RBP23.09■■□□□ 1.29
CTU2-202ENST00000453996 TSGA10Q9BZW7 698 aa23.09■■□□□ 1.29
CTU2-202ENST00000453996 MYO1AQ9UBC5 1043 aa23.09■■□□□ 1.29
CTU2-202ENST00000453996 KPNA6O60684 536 aa23.09■■□□□ 1.29
CTU2-202ENST00000453996 ABL1P00519 1130 aa23.09■■□□□ 1.29
CTU2-202ENST00000453996 C6orf222P0C671 652 aaPredicted RBP23.09■■□□□ 1.29
CTU2-202ENST00000453996 CCDC172P0C7W6 258 aa23.09■■□□□ 1.29
CTU2-202ENST00000453996 PNMA6AP0CW24 399 aaPredicted RBP23.09■■□□□ 1.29
CTU2-202ENST00000453996 GJA9P57773 515 aa23.09■■□□□ 1.29
CTU2-202ENST00000453996 PURAQ00577 322 aaKnown RBP23.09■■□□□ 1.29
CTU2-202ENST00000453996 SLC18A3Q16572 532 aa23.09■■□□□ 1.29
CTU2-202ENST00000453996 AMHR2Q16671 573 aa23.09■■□□□ 1.29
CTU2-202ENST00000453996 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.09■■□□□ 1.29
CTU2-202ENST00000453996 LUC7LQ9NQ29 371 aaKnown RBP23.09■■□□□ 1.29
CTU2-202ENST00000453996 GUCA1BQ9UMX6 200 aa23.09■■□□□ 1.29
CTU2-202ENST00000453996 SMIM35A0A1B0GVV1 85 aa23.08■■□□□ 1.29
CTU2-202ENST00000453996 EVI5O60447 810 aa23.08■■□□□ 1.29
CTU2-202ENST00000453996 CASQ1P31415 396 aa23.08■■□□□ 1.29
CTU2-202ENST00000453996 TNFSF9P41273 254 aa23.08■■□□□ 1.29
CTU2-202ENST00000453996 CDC42EP1Q00587 391 aa23.08■■□□□ 1.29
CTU2-202ENST00000453996 CAP1Q01518 475 aa23.08■■□□□ 1.29
CTU2-202ENST00000453996 KIF5AQ12840 1032 aa23.08■■□□□ 1.29
CTU2-202ENST00000453996 PTPRJQ12913 1337 aa23.08■■□□□ 1.29
CTU2-202ENST00000453996 ZACNQ401N2 412 aa23.08■■□□□ 1.29
CTU2-202ENST00000453996 EEF1DP3Q658K8 133 aa23.08■■□□□ 1.29
CTU2-202ENST00000453996 LMBRD2Q68DH5 695 aaPredicted RBP23.08■■□□□ 1.29
CTU2-202ENST00000453996 ZNF571Q7Z3V5 609 aaPredicted RBP23.08■■□□□ 1.29
CTU2-202ENST00000453996 SRGAP1Q7Z6B7 1085 aa23.08■■□□□ 1.29
CTU2-202ENST00000453996 NT5C1BQ96P26 610 aa23.08■■□□□ 1.29
CTU2-202ENST00000453996 FAM49AQ9H0Q0 323 aaPredicted RBP23.08■■□□□ 1.29
CTU2-202ENST00000453996 TRIM10Q9UDY6 481 aa23.08■■□□□ 1.29
CTU2-202ENST00000453996 CPSF3Q9UKF6 684 aaKnown RBP23.08■■□□□ 1.29
CTU2-202ENST00000453996 RCCD1A6NED2 376 aa23.07■■□□□ 1.28
CTU2-202ENST00000453996 FANCGO15287 622 aa23.07■■□□□ 1.28
CTU2-202ENST00000453996 SEPT4O43236 478 aa23.07■■□□□ 1.28
CTU2-202ENST00000453996 ZC3H11AO75152 810 aaKnown RBP eCLIP23.07■■□□□ 1.28
CTU2-202ENST00000453996 CYP2C9P11712 490 aa23.07■■□□□ 1.28
CTU2-202ENST00000453996 VPS36Q86VN1 386 aa23.07■■□□□ 1.28
CTU2-202ENST00000453996 PPP1R13LQ8WUF5 828 aa23.07■■□□□ 1.28
CTU2-202ENST00000453996 UPF3AQ9H1J1 476 aaKnown RBP23.07■■□□□ 1.28
CTU2-202ENST00000453996 CDT1Q9H211 546 aa23.07■■□□□ 1.28
CTU2-202ENST00000453996 SPC25Q9HBM1 224 aa23.07■■□□□ 1.28
CTU2-202ENST00000453996 TFR2Q9UP52 801 aa23.07■■□□□ 1.28
CTU2-202ENST00000453996 MYADML2A6NDP7 307 aa23.06■■□□□ 1.28
CTU2-202ENST00000453996 RIOK3O14730 519 aaKnown RBP23.06■■□□□ 1.28
CTU2-202ENST00000453996 CSDE1O75534 798 aaKnown RBP23.06■■□□□ 1.28
CTU2-202ENST00000453996 TRPA1O75762 1119 aa23.06■■□□□ 1.28
CTU2-202ENST00000453996 C4BPAP04003 597 aaKnown RBP23.06■■□□□ 1.28
CTU2-202ENST00000453996 MAGEA1P43355 309 aa23.06■■□□□ 1.28
CTU2-202ENST00000453996 MFAP3P55082 362 aa23.06■■□□□ 1.28
CTU2-202ENST00000453996 ADAM17P78536 824 aa23.06■■□□□ 1.28
CTU2-202ENST00000453996 BIRC3Q13489 604 aa23.06■■□□□ 1.28
CTU2-202ENST00000453996 SURF1Q15526 300 aa23.06■■□□□ 1.28
CTU2-202ENST00000453996 ZNF569Q5MCW4 686 aa23.06■■□□□ 1.28
CTU2-202ENST00000453996 TDRD10Q5VZ19 366 aaKnown RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms