RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 C2CD2LO14523 706 aa19.82■□□□□ 0.76
SQSTM1-204ENST00000453046 N4BP3O15049 544 aa19.82■□□□□ 0.76
SQSTM1-204ENST00000453046 TRAK2O60296 914 aa19.82■□□□□ 0.76
SQSTM1-204ENST00000453046 SOD2P04179 222 aa19.82■□□□□ 0.76
SQSTM1-204ENST00000453046 PRKCBP05771 671 aa19.82■□□□□ 0.76
SQSTM1-204ENST00000453046 URODP06132 367 aa19.82■□□□□ 0.76
SQSTM1-204ENST00000453046 EPCAMP16422 314 aa19.82■□□□□ 0.76
SQSTM1-204ENST00000453046 SP100P23497 879 aaPredicted RBP19.82■□□□□ 0.76
SQSTM1-204ENST00000453046 FAM187BQ17R55 369 aa19.82■□□□□ 0.76
SQSTM1-204ENST00000453046 RARS2Q5T160 578 aaKnown RBP19.82■□□□□ 0.76
SQSTM1-204ENST00000453046 CABP7Q86V35 215 aa19.82■□□□□ 0.76
SQSTM1-204ENST00000453046 GPT2Q8TD30 523 aa19.82■□□□□ 0.76
SQSTM1-204ENST00000453046 KIFAP3Q92845 792 aa19.82■□□□□ 0.76
SQSTM1-204ENST00000453046 NECTIN4Q96NY8 510 aa19.82■□□□□ 0.76
SQSTM1-204ENST00000453046 ADPGKQ9BRR6 497 aa19.82■□□□□ 0.76
SQSTM1-204ENST00000453046 COLEC11Q9BWP8 271 aa19.82■□□□□ 0.76
SQSTM1-204ENST00000453046 POLD4Q9HCU8 107 aa19.82■□□□□ 0.76
SQSTM1-204ENST00000453046 KLK14Q9P0G3 267 aa19.82■□□□□ 0.76
SQSTM1-204ENST00000453046 DNM3Q9UQ16 869 aa19.82■□□□□ 0.76
SQSTM1-204ENST00000453046 SSX2IPQ9Y2D8 614 aa19.82■□□□□ 0.76
SQSTM1-204ENST00000453046 DSC1Q08554 894 aa19.81■□□□□ 0.76
SQSTM1-204ENST00000453046 KIAA1841Q6NSI8 718 aa19.81■□□□□ 0.76
SQSTM1-204ENST00000453046 C12orf76Q8N812 135 aaPredicted RBP19.81■□□□□ 0.76
SQSTM1-204ENST00000453046 EDAQ92838 391 aa19.81■□□□□ 0.76
SQSTM1-204ENST00000453046 FAM122AQ96E09 287 aa19.81■□□□□ 0.76
SQSTM1-204ENST00000453046 RIPOR3Q96MK2 946 aa19.81■□□□□ 0.76
SQSTM1-204ENST00000453046 KLHL5Q96PQ7 755 aa19.81■□□□□ 0.76
SQSTM1-204ENST00000453046 MARCH5Q9NX47 278 aa19.81■□□□□ 0.76
SQSTM1-204ENST00000453046 NR2E1Q9Y466 385 aa19.81■□□□□ 0.76
SQSTM1-204ENST00000453046 E9PMD0 336 aa19.8■□□□□ 0.76
SQSTM1-204ENST00000453046 ACKR2O00590 384 aa19.8■□□□□ 0.76
SQSTM1-204ENST00000453046 CNPP09543 421 aaKnown RBP19.8■□□□□ 0.76
SQSTM1-204ENST00000453046 MTHFRP42898 656 aa19.8■□□□□ 0.76
SQSTM1-204ENST00000453046 EFNA5P52803 228 aa19.8■□□□□ 0.76
SQSTM1-204ENST00000453046 GRIK3Q13003 919 aa19.8■□□□□ 0.76
SQSTM1-204ENST00000453046 ZRSR1Q15695 479 aaKnown RBP19.8■□□□□ 0.76
SQSTM1-204ENST00000453046 ATAT1Q5SQI0 421 aa19.8■□□□□ 0.76
SQSTM1-204ENST00000453046 CCDC73Q6ZRK6 1079 aa19.8■□□□□ 0.76
SQSTM1-204ENST00000453046 ZBTB33Q86T24 672 aa19.8■□□□□ 0.76
SQSTM1-204ENST00000453046 SLC22A17Q8WUG5 538 aa19.8■□□□□ 0.76
SQSTM1-204ENST00000453046 KIFC3Q9BVG8 833 aa19.8■□□□□ 0.76
SQSTM1-204ENST00000453046 HERC2P3Q9BVR0 1158 aa19.8■□□□□ 0.76
SQSTM1-204ENST00000453046 PDZD7Q9H5P4 517 aa19.8■□□□□ 0.76
SQSTM1-204ENST00000453046 CDH22Q9UJ99 828 aa19.8■□□□□ 0.76
SQSTM1-204ENST00000453046 TTLL13PA6NNM8 815 aa19.79■□□□□ 0.76
SQSTM1-204ENST00000453046 PP2D1A8MPX8 630 aa19.79■□□□□ 0.76
SQSTM1-204ENST00000453046 WEE2P0C1S8 567 aa19.79■□□□□ 0.76
SQSTM1-204ENST00000453046 CMA1P23946 247 aa19.79■□□□□ 0.76
SQSTM1-204ENST00000453046 CDC25AP30304 524 aa19.79■□□□□ 0.76
SQSTM1-204ENST00000453046 GLUD2P49448 558 aa19.79■□□□□ 0.76
SQSTM1-204ENST00000453046 TAS1R1Q7RTX1 841 aa19.79■□□□□ 0.76
SQSTM1-204ENST00000453046 FSIP1Q8NA03 581 aa19.79■□□□□ 0.76
SQSTM1-204ENST00000453046 FBXL18Q96ME1 805 aa19.79■□□□□ 0.76
SQSTM1-204ENST00000453046 POMKQ9H5K3 350 aa19.79■□□□□ 0.76
SQSTM1-204ENST00000453046 SNTG2Q9NY99 539 aa19.79■□□□□ 0.76
SQSTM1-204ENST00000453046 USP20Q9Y2K6 914 aa19.79■□□□□ 0.76
SQSTM1-204ENST00000453046 FAM237AA0A1B0GTK4 181 aa19.78■□□□□ 0.76
SQSTM1-204ENST00000453046 CCDC169A6NNP5 214 aa19.78■□□□□ 0.76
SQSTM1-204ENST00000453046 K7ERI5 159 aa19.78■□□□□ 0.76
SQSTM1-204ENST00000453046 ADH1AP07327 375 aa19.78■□□□□ 0.76
SQSTM1-204ENST00000453046 LONP1P36776 959 aaKnown RBP19.78■□□□□ 0.76
SQSTM1-204ENST00000453046 CLCN4P51793 760 aa19.78■□□□□ 0.76
SQSTM1-204ENST00000453046 IL17AQ16552 155 aa19.78■□□□□ 0.76
SQSTM1-204ENST00000453046 RESP18Q5W5W9 173 aa19.78■□□□□ 0.76
SQSTM1-204ENST00000453046 KANK3Q6NY19 840 aa19.78■□□□□ 0.76
SQSTM1-204ENST00000453046 TMC5Q6UXY8 1006 aa19.78■□□□□ 0.76
SQSTM1-204ENST00000453046 GSTCDQ8NEC7 633 aa19.78■□□□□ 0.76
SQSTM1-204ENST00000453046 SYAP1Q96A49 352 aaPredicted RBP19.78■□□□□ 0.76
SQSTM1-204ENST00000453046 CCDC113Q9H0I3 377 aa19.78■□□□□ 0.76
SQSTM1-204ENST00000453046 SFXN1Q9H9B4 322 aa19.78■□□□□ 0.76
SQSTM1-204ENST00000453046 ARIH1Q9Y4X5 557 aaPredicted RBP19.78■□□□□ 0.76
SQSTM1-204ENST00000453046 ZMYM2Q9UBW7 1377 aa19.78■□□□□ 0.76
SQSTM1-204ENST00000453046 F8W810 466 aa19.77■□□□□ 0.76
SQSTM1-204ENST00000453046 LILRB3O75022 631 aa19.77■□□□□ 0.76
SQSTM1-204ENST00000453046 TADA2AO75478 443 aa19.77■□□□□ 0.76
SQSTM1-204ENST00000453046 PLA2G5P39877 138 aa19.77■□□□□ 0.76
SQSTM1-204ENST00000453046 ZXDAP98168 799 aa19.77■□□□□ 0.76
SQSTM1-204ENST00000453046 FUT10Q6P4F1 479 aa19.77■□□□□ 0.76
SQSTM1-204ENST00000453046 ELMSAN1Q6PJG2 1045 aa19.77■□□□□ 0.76
SQSTM1-204ENST00000453046 SHC4Q6S5L8 630 aa19.77■□□□□ 0.76
SQSTM1-204ENST00000453046 TRIM67Q6ZTA4 783 aa19.77■□□□□ 0.76
SQSTM1-204ENST00000453046 APBB1IPQ7Z5R6 666 aaPredicted RBP19.77■□□□□ 0.76
SQSTM1-204ENST00000453046 RABGGTAQ92696 567 aa19.77■□□□□ 0.76
SQSTM1-204ENST00000453046 AK8Q96MA6 479 aa19.77■□□□□ 0.76
SQSTM1-204ENST00000453046 MFSD14AQ96MC6 490 aa19.77■□□□□ 0.76
SQSTM1-204ENST00000453046 ADAM28Q9UKQ2 775 aa19.77■□□□□ 0.76
SQSTM1-204ENST00000453046 TDRD15B5MCY1 1934 aaKnown RBP19.76■□□□□ 0.75
SQSTM1-204ENST00000453046 VWA3AA6NCI4 1184 aa19.76■□□□□ 0.75
SQSTM1-204ENST00000453046 HIP1RO75146 1068 aa19.76■□□□□ 0.75
SQSTM1-204ENST00000453046 RECQL4O94761 1208 aa19.76■□□□□ 0.75
SQSTM1-204ENST00000453046 THP07101 528 aa19.76■□□□□ 0.75
SQSTM1-204ENST00000453046 PEX3P56589 373 aa19.76■□□□□ 0.75
SQSTM1-204ENST00000453046 GRIN1Q05586 938 aa19.76■□□□□ 0.75
SQSTM1-204ENST00000453046 FAM160A1Q05DH4 1040 aa19.76■□□□□ 0.75
SQSTM1-204ENST00000453046 DMP1Q13316 513 aaPredicted RBP19.76■□□□□ 0.75
SQSTM1-204ENST00000453046 TUSC3Q13454 348 aa19.76■□□□□ 0.75
SQSTM1-204ENST00000453046 USP41Q3LFD5 358 aa19.76■□□□□ 0.75
SQSTM1-204ENST00000453046 DCAF4L1Q3SXM0 396 aa19.76■□□□□ 0.75
SQSTM1-204ENST00000453046 ATF7IP2Q5U623 682 aa19.76■□□□□ 0.75
SQSTM1-204ENST00000453046 HFE2Q6ZVN8 426 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms