RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 TRIM6Q9C030 488 aaPredicted RBP9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 NT5C3AQ9H0P0 336 aa9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 POLR3FQ9H1D9 316 aaPredicted RBP9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 PLEKHA4Q9H4M7 779 aa9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 TTC12Q9H892 705 aaPredicted RBP9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 GPRC5CQ9NQ84 441 aa9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 FNIP2Q9P278 1114 aa9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 WNT16Q9UBV4 365 aa9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 DPP7Q9UHL4 492 aa9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 ADAM28Q9UKQ2 775 aa9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 CACNA1AO00555 2505 aa9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 A0A1B0GUA9 196 aa9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 POTEMA6NI47 508 aa9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 NEMFO60524 1076 aa9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 USO1O60763 962 aaKnown RBP9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 C1RP00736 705 aa9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 SRFP11831 508 aa9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 NCBP1Q09161 790 aaKnown RBP9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 USP41Q3LFD5 358 aa9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 RTP2Q5QGT7 225 aa9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 CDCA2Q69YH5 1023 aaPredicted RBP9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 ELMSAN1Q6PJG2 1045 aa9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 PRSS55Q6UWB4 352 aaPredicted RBP9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 GET4Q7L5D6 327 aaPredicted RBP9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 GPR65Q8IYL9 337 aa9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 ST13P5Q8NFI4 369 aaPredicted RBP9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 GPR152Q8TDT2 470 aa9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 RIN2Q8WYP3 895 aaPredicted RBP9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 MTMR9Q96QG7 549 aa9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 CXCL16Q9H2A7 254 aa9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 ZDHHC7Q9NXF8 308 aa9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 CA14Q9ULX7 337 aa9.8□□□□□ -0.84
DEPDC1B-202ENST00000453022 CITO14578 2027 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 BTBD18B2RXH4 712 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 ANHXE9PGG2 379 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 PTGESO14684 152 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 NR1I2O75469 434 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 KIF4AO95239 1232 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 EDN1P05305 212 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 SPATA31C1P0DKV0 1188 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 LAMP2P13473 410 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 TXKP42681 527 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 HTR4Q13639 388 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 HSP90AA2PQ14568 343 aaPredicted RBP9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 NAB2Q15742 525 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 ME3Q16798 604 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 MAEAQ7L5Y9 396 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 HACE1Q8IYU2 909 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 ADSSL1Q8N142 457 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 NSUN7Q8NE18 718 aaKnown RBP9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 HASPINQ8TF76 798 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 WASF1Q92558 559 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 SPOCK2Q92563 424 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 GTF3C6Q969F1 213 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 CCDC43Q96MW1 224 aaKnown RBP9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 PRKD2Q9BZL6 878 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 TMEM60Q9H2L4 133 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 PDZD7Q9H5P4 517 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 TBC1D17Q9HA65 648 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 PARP2Q9UGN5 583 aa9.79□□□□□ -0.84
DEPDC1B-202ENST00000453022 SF3B1O75533 1304 aaKnown RBP eCLIP9.78□□□□□ -0.845e-6■■■■■ 85.6
DEPDC1B-202ENST00000453022 CACNA1IQ9P0X4 2223 aa9.78□□□□□ -0.84
DEPDC1B-202ENST00000453022 CASTOR2A6NHX0 329 aa9.78□□□□□ -0.84
DEPDC1B-202ENST00000453022 LRRIQ4A6NIV6 560 aa9.78□□□□□ -0.84
DEPDC1B-202ENST00000453022 JAK2O60674 1132 aa9.78□□□□□ -0.84
DEPDC1B-202ENST00000453022 ZMYND10O75800 440 aa9.78□□□□□ -0.84
DEPDC1B-202ENST00000453022 FOSBP53539 338 aa9.78□□□□□ -0.84
DEPDC1B-202ENST00000453022 NTHL1P78549 312 aa9.78□□□□□ -0.84
DEPDC1B-202ENST00000453022 TUSC3Q13454 348 aa9.78□□□□□ -0.84
DEPDC1B-202ENST00000453022 DIS3L2Q8IYB7 885 aaKnown RBP9.78□□□□□ -0.84
DEPDC1B-202ENST00000453022 BSNDQ8WZ55 320 aa9.78□□□□□ -0.84
DEPDC1B-202ENST00000453022 NXPE3Q969Y0 559 aa9.78□□□□□ -0.84
DEPDC1B-202ENST00000453022 PRIMPOLQ96LW4 560 aa9.78□□□□□ -0.84
DEPDC1B-202ENST00000453022 CLSTN3Q9BQT9 956 aa9.78□□□□□ -0.84
DEPDC1B-202ENST00000453022 FZD8Q9H461 694 aa9.78□□□□□ -0.84
DEPDC1B-202ENST00000453022 PIDD1Q9HB75 910 aa9.78□□□□□ -0.84
DEPDC1B-202ENST00000453022 BRMS1Q9HCU9 246 aa9.78□□□□□ -0.84
DEPDC1B-202ENST00000453022 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.78□□□□□ -0.84
DEPDC1B-202ENST00000453022 DLGAP2Q9P1A6 1054 aa9.78□□□□□ -0.84
DEPDC1B-202ENST00000453022 FBXW11Q9UKB1 542 aa9.78□□□□□ -0.84
DEPDC1B-202ENST00000453022 USP20Q9Y2K6 914 aa9.78□□□□□ -0.84
DEPDC1B-202ENST00000453022 NUMBLQ9Y6R0 609 aa9.78□□□□□ -0.84
DEPDC1B-202ENST00000453022 COL4A2P08572 1712 aa9.78□□□□□ -0.84
DEPDC1B-202ENST00000453022 MYH11P35749 1972 aa9.77□□□□□ -0.84
DEPDC1B-202ENST00000453022 ADAM12O43184 909 aa9.77□□□□□ -0.85
DEPDC1B-202ENST00000453022 MED24O75448 989 aa9.77□□□□□ -0.85
DEPDC1B-202ENST00000453022 TADA2AO75478 443 aa9.77□□□□□ -0.85
DEPDC1B-202ENST00000453022 RECQL4O94761 1208 aa9.77□□□□□ -0.85
DEPDC1B-202ENST00000453022 XRCC6P12956 609 aaKnown RBP eCLIP9.77□□□□□ -0.85
DEPDC1B-202ENST00000453022 IGFBP6P24592 240 aaPredicted RBP9.77□□□□□ -0.85
DEPDC1B-202ENST00000453022 CREMQ03060 361 aa9.77□□□□□ -0.85
DEPDC1B-202ENST00000453022 ST3GAL1Q11201 340 aa9.77□□□□□ -0.85
DEPDC1B-202ENST00000453022 FAM187BQ17R55 369 aa9.77□□□□□ -0.85
DEPDC1B-202ENST00000453022 GRASPQ7Z6J2 395 aaPredicted RBP9.77□□□□□ -0.85
DEPDC1B-202ENST00000453022 CATSPER3Q86XQ3 398 aa9.77□□□□□ -0.85
DEPDC1B-202ENST00000453022 LNX1Q8TBB1 728 aaPredicted RBP9.77□□□□□ -0.85
DEPDC1B-202ENST00000453022 PIK3R5Q8WYR1 880 aa9.77□□□□□ -0.85
DEPDC1B-202ENST00000453022 FGF14Q92915 247 aa9.77□□□□□ -0.85
DEPDC1B-202ENST00000453022 RPP25Q9BUL9 199 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms