RNA–Protein interactions for RNA: ENST00000452724.1

USP40-209, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-209ENST00000452724 AKR1B10O60218 316 aa5.29□□□□□ -1.56
USP40-209ENST00000452724 PHF2O75151 1096 aa5.29□□□□□ -1.56
USP40-209ENST00000452724 SCNN1GP51170 649 aa5.29□□□□□ -1.56
USP40-209ENST00000452724 PPP3CAQ08209 521 aa5.29□□□□□ -1.56
USP40-209ENST00000452724 TMEM240Q5SV17 173 aa5.29□□□□□ -1.56
USP40-209ENST00000452724 FAM180AQ6UWF9 173 aa5.29□□□□□ -1.56
USP40-209ENST00000452724 Q6ZRM9 215 aa5.29□□□□□ -1.56
USP40-209ENST00000452724 ZNF480Q8WV37 535 aa5.29□□□□□ -1.56
USP40-209ENST00000452724 ATXN2LQ8WWM7 1075 aaKnown RBP5.29□□□□□ -1.56
USP40-209ENST00000452724 RBM12Q9NTZ6 932 aaKnown RBP5.29□□□□□ -1.56
USP40-209ENST00000452724 HECAQ9UBI9 543 aaPredicted RBP5.29□□□□□ -1.56
USP40-209ENST00000452724 DNM3Q9UQ16 869 aa5.29□□□□□ -1.56
USP40-209ENST00000452724 GSPT1P15170 499 aaKnown RBP5.28□□□□□ -1.56
USP40-209ENST00000452724 ECHS1P30084 290 aa5.28□□□□□ -1.56
USP40-209ENST00000452724 ADSLP30566 484 aaPredicted RBP5.28□□□□□ -1.56
USP40-209ENST00000452724 PTGS2P35354 604 aa5.28□□□□□ -1.56
USP40-209ENST00000452724 RAB27AP51159 221 aa5.28□□□□□ -1.56
USP40-209ENST00000452724 SLC16A1P53985 500 aa5.28□□□□□ -1.56
USP40-209ENST00000452724 DUSP2Q05923 314 aa5.28□□□□□ -1.56
USP40-209ENST00000452724 PIN1Q13526 163 aaPredicted RBP5.28□□□□□ -1.56
USP40-209ENST00000452724 NOMO1Q15155 1222 aa5.28□□□□□ -1.56
USP40-209ENST00000452724 MST1LQ2TV78 715 aa5.28□□□□□ -1.56
USP40-209ENST00000452724 GJC2Q5T442 439 aaPredicted RBP5.28□□□□□ -1.56
USP40-209ENST00000452724 FNDC7Q5VTL7 733 aa5.28□□□□□ -1.56
USP40-209ENST00000452724 CMTR2Q8IYT2 770 aaKnown RBP5.28□□□□□ -1.56
USP40-209ENST00000452724 CPA6Q8N4T0 437 aa5.28□□□□□ -1.56
USP40-209ENST00000452724 JDP2Q8WYK2 163 aa5.28□□□□□ -1.56
USP40-209ENST00000452724 CLIP3Q96DZ5 547 aa5.28□□□□□ -1.56
USP40-209ENST00000452724 ZNF512Q96ME7 567 aaPredicted RBP5.28□□□□□ -1.56
USP40-209ENST00000452724 PRRX2Q99811 253 aa5.28□□□□□ -1.56
USP40-209ENST00000452724 EPC1Q9H2F5 836 aa5.28□□□□□ -1.56
USP40-209ENST00000452724 C11orf21Q9P2W6 132 aa5.28□□□□□ -1.56
USP40-209ENST00000452724 IP6K2Q9UHH9 426 aa5.28□□□□□ -1.56
USP40-209ENST00000452724 SAP30BPQ9UHR5 308 aaKnown RBP5.28□□□□□ -1.56
USP40-209ENST00000452724 A0A087X1B8 175 aa5.27□□□□□ -1.57
USP40-209ENST00000452724 E2F8A0AVK6 867 aa5.27□□□□□ -1.57
USP40-209ENST00000452724 AKAP10O43572 662 aa5.27□□□□□ -1.57
USP40-209ENST00000452724 PPFIA4O75335 1185 aa5.27□□□□□ -1.57
USP40-209ENST00000452724 ABLIM3O94929 683 aa5.27□□□□□ -1.57
USP40-209ENST00000452724 ZRANB2O95218 330 aaKnown RBP eCLIP5.27□□□□□ -1.57
USP40-209ENST00000452724 GYPEP15421 78 aa5.27□□□□□ -1.57
USP40-209ENST00000452724 CASRP41180 1078 aa5.27□□□□□ -1.57
USP40-209ENST00000452724 ADKP55263 362 aaKnown RBP5.27□□□□□ -1.57
USP40-209ENST00000452724 INHBEP58166 350 aa5.27□□□□□ -1.57
USP40-209ENST00000452724 KIF23Q02241 960 aaPredicted RBP5.27□□□□□ -1.57
USP40-209ENST00000452724 MGAT2Q10469 447 aa5.27□□□□□ -1.57
USP40-209ENST00000452724 SMN1Q16637 294 aaKnown RBP5.27□□□□□ -1.57
USP40-209ENST00000452724 RAVER1Q8IY67 606 aaKnown RBP5.27□□□□□ -1.57
USP40-209ENST00000452724 ELOA2Q8IYF1 753 aaPredicted RBP5.27□□□□□ -1.57
USP40-209ENST00000452724 MB21D1Q8N884 522 aa5.27□□□□□ -1.57
USP40-209ENST00000452724 MDGA1Q8NFP4 955 aa5.27□□□□□ -1.57
USP40-209ENST00000452724 OR5M3Q8NGP4 307 aa5.27□□□□□ -1.57
USP40-209ENST00000452724 NRG4Q8WWG1 115 aa5.27□□□□□ -1.57
USP40-209ENST00000452724 TCF7L1Q9HCS4 588 aa5.27□□□□□ -1.57
USP40-209ENST00000452724 SLC2A4RGQ9NR83 387 aa5.27□□□□□ -1.57
USP40-209ENST00000452724 GPRC5DQ9NZD1 345 aa5.27□□□□□ -1.57
USP40-209ENST00000452724 G3BP2Q9UN86 482 aaKnown RBP5.27□□□□□ -1.57
USP40-209ENST00000452724 XDHP47989 1333 aa5.26□□□□□ -1.57
USP40-209ENST00000452724 TMEM191CA6NGB0 347 aa5.26□□□□□ -1.57
USP40-209ENST00000452724 FAM171A2A8MVW0 826 aa5.26□□□□□ -1.57
USP40-209ENST00000452724 ITGA10O75578 1167 aa5.26□□□□□ -1.57
USP40-209ENST00000452724 GASTP01350 101 aa5.26□□□□□ -1.57
USP40-209ENST00000452724 WASP42768 502 aa5.26□□□□□ -1.57
USP40-209ENST00000452724 TOB2Q14106 344 aaPredicted RBP5.26□□□□□ -1.57
USP40-209ENST00000452724 DCAF17Q5H9S7 520 aaPredicted RBP5.26□□□□□ -1.57
USP40-209ENST00000452724 Q6ZVL8 140 aa5.26□□□□□ -1.57
USP40-209ENST00000452724 APBB1IPQ7Z5R6 666 aaPredicted RBP5.26□□□□□ -1.57
USP40-209ENST00000452724 MRGPRGQ86SM5 289 aa5.26□□□□□ -1.57
USP40-209ENST00000452724 SYNE4Q8N205 404 aa5.26□□□□□ -1.57
USP40-209ENST00000452724 LILRA3Q8N6C8 439 aaPredicted RBP5.26□□□□□ -1.57
USP40-209ENST00000452724 ST8SIA2Q92186 375 aa5.26□□□□□ -1.57
USP40-209ENST00000452724 LARP4BQ92615 738 aaKnown RBP5.26□□□□□ -1.57
USP40-209ENST00000452724 DPF2Q92785 391 aa5.26□□□□□ -1.57
USP40-209ENST00000452724 HOXB13Q92826 284 aaPredicted RBP5.26□□□□□ -1.57
USP40-209ENST00000452724 MNTQ99583 582 aa5.26□□□□□ -1.57
USP40-209ENST00000452724 RTFDC1Q9BY42 306 aaPredicted RBP5.26□□□□□ -1.57
USP40-209ENST00000452724 ENKD1Q9H0I2 346 aa5.26□□□□□ -1.57
USP40-209ENST00000452724 IKZF4Q9H2S9 585 aa5.26□□□□□ -1.57
USP40-209ENST00000452724 METTL14Q9HCE5 456 aaKnown RBP5.26□□□□□ -1.57
USP40-209ENST00000452724 KLHL42Q9P2K6 505 aa5.26□□□□□ -1.57
USP40-209ENST00000452724 TRPS1Q9UHF7 1281 aa5.26□□□□□ -1.57
USP40-209ENST00000452724 ZNF180Q9UJW8 692 aa5.26□□□□□ -1.57
USP40-209ENST00000452724 INTUQ9ULD6 942 aa5.26□□□□□ -1.57
USP40-209ENST00000452724 EID1Q9Y6B2 187 aa5.26□□□□□ -1.57
USP40-209ENST00000452724 RAMP2O60895 175 aa5.25□□□□□ -1.57
USP40-209ENST00000452724 ENDOD1O94919 500 aa5.25□□□□□ -1.57
USP40-209ENST00000452724 IL33O95760 270 aa5.25□□□□□ -1.57
USP40-209ENST00000452724 CT47B1P0C2W7 299 aaPredicted RBP5.25□□□□□ -1.57
USP40-209ENST00000452724 PF4V1P10720 104 aa5.25□□□□□ -1.57
USP40-209ENST00000452724 CRHR1P34998 444 aa5.25□□□□□ -1.57
USP40-209ENST00000452724 RABGGTBP53611 331 aa5.25□□□□□ -1.57
USP40-209ENST00000452724 PER3P56645 1201 aa5.25□□□□□ -1.57
USP40-209ENST00000452724 SEPT2Q15019 361 aa5.25□□□□□ -1.57
USP40-209ENST00000452724 UAP1L1Q3KQV9 507 aa5.25□□□□□ -1.57
USP40-209ENST00000452724 RABL3Q5HYI8 236 aa5.25□□□□□ -1.57
USP40-209ENST00000452724 MIER2Q8N344 545 aa5.25□□□□□ -1.57
USP40-209ENST00000452724 OR7D4Q8NG98 312 aa5.25□□□□□ -1.57
USP40-209ENST00000452724 OR2I1PQ8NGU4 316 aa5.25□□□□□ -1.57
USP40-209ENST00000452724 SLC25A43Q8WUT9 341 aaPredicted RBP5.25□□□□□ -1.57
USP40-209ENST00000452724 HAS1Q92839 578 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms