RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 GDAQ9Y2T3 454 aa14.19□□□□□ -0.14
CHD3-206ENST00000452447 F8W810 466 aa14.18□□□□□ -0.14
CHD3-206ENST00000452447 TEX28O15482 410 aa14.18□□□□□ -0.14
CHD3-206ENST00000452447 HIP1RO75146 1068 aa14.18□□□□□ -0.14
CHD3-206ENST00000452447 PLA2G5P39877 138 aa14.18□□□□□ -0.14
CHD3-206ENST00000452447 ZXDAP98168 799 aa14.18□□□□□ -0.14
CHD3-206ENST00000452447 DSG1Q02413 1049 aa14.18□□□□□ -0.14
CHD3-206ENST00000452447 HSP90AA2PQ14568 343 aaPredicted RBP14.18□□□□□ -0.14
CHD3-206ENST00000452447 ATF7IP2Q5U623 682 aa14.18□□□□□ -0.14
CHD3-206ENST00000452447 KIAA0319Q5VV43 1072 aa14.18□□□□□ -0.14
CHD3-206ENST00000452447 EEF1DP3Q658K8 133 aa14.18□□□□□ -0.14
CHD3-206ENST00000452447 ARL6IP4Q66PJ3 421 aaKnown RBP14.18□□□□□ -0.14
CHD3-206ENST00000452447 RINT1Q6NUQ1 792 aa14.18□□□□□ -0.14
CHD3-206ENST00000452447 HFE2Q6ZVN8 426 aa14.18□□□□□ -0.14
CHD3-206ENST00000452447 RNF168Q8IYW5 571 aaPredicted RBP14.18□□□□□ -0.14
CHD3-206ENST00000452447 KCTD17Q8N5Z5 321 aa14.18□□□□□ -0.14
CHD3-206ENST00000452447 RABGGTAQ92696 567 aa14.18□□□□□ -0.14
CHD3-206ENST00000452447 MMTAG2Q9BU76 263 aaKnown RBP14.18□□□□□ -0.14
CHD3-206ENST00000452447 NT5C3AQ9H0P0 336 aa14.18□□□□□ -0.14
CHD3-206ENST00000452447 C17orf75Q9HAS0 396 aa14.18□□□□□ -0.14
CHD3-206ENST00000452447 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.18□□□□□ -0.14
CHD3-206ENST00000452447 C2orf16Q68DN1 1984 aa14.18□□□□□ -0.14
CHD3-206ENST00000452447 SF3B1O75533 1304 aaKnown RBP eCLIP14.18□□□□□ -0.146e-6■■■■■ 103.4
CHD3-206ENST00000452447 PHLPP2Q6ZVD8 1323 aa14.18□□□□□ -0.14
CHD3-206ENST00000452447 PIEZO1Q92508 2521 aa14.18□□□□□ -0.14
CHD3-206ENST00000452447 TMEM221A6NGB7 291 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 CASTOR2A6NHX0 329 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 M0R296 226 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 CITO14578 2027 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 EFEMP2O95967 443 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 GLUD1P00367 558 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 EDN1P05305 212 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 NPTX2P47972 431 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 PTPN21Q16825 1174 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 C1orf186Q6ZWK4 172 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 GPR149Q86SP6 731 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 TDRD5Q8NAT2 981 aaKnown RBP14.17□□□□□ -0.14
CHD3-206ENST00000452447 RUSC1Q9BVN2 902 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 TIPINQ9BVW5 301 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 GPR62Q9BZJ7 368 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 KMT5AQ9NQR1 393 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 MAN1C1Q9NR34 630 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 CHST7Q9NS84 486 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 KCNG1Q9UIX4 513 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 TNFSF13BQ9Y275 285 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 RBM19Q9Y4C8 960 aaKnown RBP14.17□□□□□ -0.14
CHD3-206ENST00000452447 PLXNA3P51805 1871 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 C2CD4DB7Z1M9 353 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 PTGESO14684 152 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 SIGLEC14Q08ET2 396 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 NT5DC1Q5TFE4 455 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 C15orf39Q6ZRI6 1047 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 KCNK18Q7Z418 384 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 DAW1Q8N136 415 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 RIN2Q8WYP3 895 aaPredicted RBP14.17□□□□□ -0.14
CHD3-206ENST00000452447 PBXIP1Q96AQ6 731 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 B3GALT6Q96L58 329 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 PLIN2Q99541 437 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 PAAF1Q9BRP4 392 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 MRPL4Q9BYD3 311 aaKnown RBP14.17□□□□□ -0.14
CHD3-206ENST00000452447 TMEM134Q9H6X4 195 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 RXFP1Q9HBX9 757 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 CACNG4Q9UBN1 327 aa14.17□□□□□ -0.14
CHD3-206ENST00000452447 SFI1A8K8P3 1242 aa14.16□□□□□ -0.14
CHD3-206ENST00000452447 GUCY2CP25092 1073 aa14.16□□□□□ -0.14
CHD3-206ENST00000452447 SMTNP53814 917 aa14.16□□□□□ -0.14
CHD3-206ENST00000452447 YARSP54577 528 aaKnown RBP14.16□□□□□ -0.14
CHD3-206ENST00000452447 CREMQ03060 361 aa14.16□□□□□ -0.14
CHD3-206ENST00000452447 RAD51AP2Q09MP3 1159 aa14.16□□□□□ -0.14
CHD3-206ENST00000452447 HYIQ5T013 277 aa14.16□□□□□ -0.14
CHD3-206ENST00000452447 CCDC149Q6ZUS6 474 aa14.16□□□□□ -0.14
CHD3-206ENST00000452447 PALB2Q86YC2 1186 aa14.16□□□□□ -0.14
CHD3-206ENST00000452447 GPR65Q8IYL9 337 aa14.16□□□□□ -0.14
CHD3-206ENST00000452447 PLCD3Q8N3E9 789 aa14.16□□□□□ -0.14
CHD3-206ENST00000452447 HASPINQ8TF76 798 aa14.16□□□□□ -0.14
CHD3-206ENST00000452447 ACSF2Q96CM8 615 aaPredicted RBP14.16□□□□□ -0.14
CHD3-206ENST00000452447 AK8Q96MA6 479 aa14.16□□□□□ -0.14
CHD3-206ENST00000452447 TCHPQ9BT92 498 aa14.16□□□□□ -0.14
CHD3-206ENST00000452447 ARHGAP28Q9P2N2 729 aa14.16□□□□□ -0.14
CHD3-206ENST00000452447 USTQ9Y2C2 406 aa14.16□□□□□ -0.14
CHD3-206ENST00000452447 BMP15O95972 392 aa14.15□□□□□ -0.14
CHD3-206ENST00000452447 UBA7P41226 1012 aa14.15□□□□□ -0.14
CHD3-206ENST00000452447 ZNF568Q3ZCX4 644 aa14.15□□□□□ -0.14
CHD3-206ENST00000452447 GLRA4Q5JXX5 417 aa14.15□□□□□ -0.14
CHD3-206ENST00000452447 FAM171A1Q5VUB5 890 aa14.15□□□□□ -0.14
CHD3-206ENST00000452447 BRAPQ7Z569 592 aa14.15□□□□□ -0.14
CHD3-206ENST00000452447 BMP8AQ7Z5Y6 402 aa14.15□□□□□ -0.14
CHD3-206ENST00000452447 CEP57Q86XR8 500 aa14.15□□□□□ -0.14
CHD3-206ENST00000452447 GLYCTKQ8IVS8 523 aa14.15□□□□□ -0.14
CHD3-206ENST00000452447 SUGP1Q8IWZ8 645 aaKnown RBP14.15□□□□□ -0.14
CHD3-206ENST00000452447 SYT2Q8N9I0 419 aaPredicted RBP14.15□□□□□ -0.14
CHD3-206ENST00000452447 HDAC7Q8WUI4 952 aa14.15□□□□□ -0.14
CHD3-206ENST00000452447 PNMA5Q96PV4 448 aa14.15□□□□□ -0.14
CHD3-206ENST00000452447 ACO2Q99798 780 aaKnown RBP14.15□□□□□ -0.14
CHD3-206ENST00000452447 CCDC94Q9BW85 323 aaPredicted RBP14.15□□□□□ -0.14
CHD3-206ENST00000452447 CXCL16Q9H2A7 254 aa14.15□□□□□ -0.14
CHD3-206ENST00000452447 TOPORSQ9NS56 1045 aaPredicted RBP14.15□□□□□ -0.14
CHD3-206ENST00000452447 KCND2Q9NZV8 630 aa14.15□□□□□ -0.14
CHD3-206ENST00000452447 FNIP2Q9P278 1114 aa14.15□□□□□ -0.14
CHD3-206ENST00000452447 SORCS3Q9UPU3 1222 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms