RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 BLZF1Q9H2G9 400 aa9.71□□□□□ -0.86
COL8A1-203ENST00000452013 ALG13Q9NP73 1137 aaKnown RBP9.71□□□□□ -0.86
COL8A1-203ENST00000452013 MIOSQ9NXC5 875 aa9.71□□□□□ -0.86
COL8A1-203ENST00000452013 KLK14Q9P0G3 267 aa9.71□□□□□ -0.86
COL8A1-203ENST00000452013 TBC1D7Q9P0N9 293 aa9.71□□□□□ -0.86
COL8A1-203ENST00000452013 ANKFY1Q9P2R3 1169 aa9.71□□□□□ -0.86
COL8A1-203ENST00000452013 HOOK1Q9UJC3 728 aaKnown RBP9.71□□□□□ -0.86
COL8A1-203ENST00000452013 LZTS1Q9Y250 596 aa9.71□□□□□ -0.86
COL8A1-203ENST00000452013 SCN5AQ14524 2016 aa9.71□□□□□ -0.86
COL8A1-203ENST00000452013 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.7□□□□□ -0.86
COL8A1-203ENST00000452013 NRP1O14786 923 aa9.7□□□□□ -0.86
COL8A1-203ENST00000452013 OGTO15294 1046 aa9.7□□□□□ -0.86
COL8A1-203ENST00000452013 GRM6O15303 877 aa9.7□□□□□ -0.86
COL8A1-203ENST00000452013 ZC3H11AO75152 810 aaKnown RBP eCLIP9.7□□□□□ -0.86
COL8A1-203ENST00000452013 RECQL4O94761 1208 aa9.7□□□□□ -0.86
COL8A1-203ENST00000452013 ITGB1P05556 798 aa9.7□□□□□ -0.86
COL8A1-203ENST00000452013 CLTAP09496 248 aa9.7□□□□□ -0.86
COL8A1-203ENST00000452013 HARSP12081 509 aaKnown RBP9.7□□□□□ -0.86
COL8A1-203ENST00000452013 OR1G1P47890 313 aa9.7□□□□□ -0.86
COL8A1-203ENST00000452013 AFF1P51825 1210 aaKnown RBP9.7□□□□□ -0.86
COL8A1-203ENST00000452013 OSTNP61366 133 aa9.7□□□□□ -0.86
COL8A1-203ENST00000452013 CUL4BQ13620 913 aa9.7□□□□□ -0.86
COL8A1-203ENST00000452013 NOLC1Q14978 699 aaKnown RBP eCLIP9.7□□□□□ -0.86
COL8A1-203ENST00000452013 CCDC85BQ15834 202 aaPredicted RBP9.7□□□□□ -0.86
COL8A1-203ENST00000452013 TIGD5Q53EQ6 642 aa9.7□□□□□ -0.86
COL8A1-203ENST00000452013 FAM26FQ5R3K3 315 aa9.7□□□□□ -0.86
COL8A1-203ENST00000452013 KRBA2Q6ZNG9 492 aa9.7□□□□□ -0.86
COL8A1-203ENST00000452013 ZNF280BQ86YH2 543 aa9.7□□□□□ -0.86
COL8A1-203ENST00000452013 SLC39A11Q8N1S5 342 aa9.7□□□□□ -0.86
COL8A1-203ENST00000452013 MICALL1Q8N3F8 863 aa9.7□□□□□ -0.86
COL8A1-203ENST00000452013 PPM1EQ8WY54 764 aa9.7□□□□□ -0.86
COL8A1-203ENST00000452013 ZFP42Q96MM3 310 aa9.7□□□□□ -0.86
COL8A1-203ENST00000452013 TSPAN18Q96SJ8 248 aa9.7□□□□□ -0.86
COL8A1-203ENST00000452013 PLEKHA5Q9HAU0 1116 aa9.7□□□□□ -0.86
COL8A1-203ENST00000452013 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.7□□□□□ -0.86
COL8A1-203ENST00000452013 TRIP12Q14669 1992 aaPredicted RBP9.7□□□□□ -0.86
COL8A1-203ENST00000452013 A0A0B4J269 797 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 NT5C1B-RDH14C9J2C7 533 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 ANKRD63C9JTQ0 380 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 ABLIM1O14639 778 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 CEP290O15078 2479 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 EIF3DO15371 548 aaKnown RBP eCLIP9.69□□□□□ -0.86
COL8A1-203ENST00000452013 NCK2O43639 380 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 PPP1R37O75864 691 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 PRPF6O94906 941 aaKnown RBP9.69□□□□□ -0.86
COL8A1-203ENST00000452013 KIF20AO95235 890 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 LDHAP00338 332 aaKnown RBP9.69□□□□□ -0.86
COL8A1-203ENST00000452013 MYBP10242 640 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 MYH9P35579 1960 aaKnown RBP9.69□□□□□ -0.86
COL8A1-203ENST00000452013 SLC11A1P49279 550 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 SNRPFP62306 86 aaKnown RBP9.69□□□□□ -0.86
COL8A1-203ENST00000452013 POU5F1Q01860 360 aaKnown RBP9.69□□□□□ -0.86
COL8A1-203ENST00000452013 TUSC3Q13454 348 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 COL4A6Q14031 1691 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 HSP90AA2PQ14568 343 aaPredicted RBP9.69□□□□□ -0.86
COL8A1-203ENST00000452013 SKIV2LQ15477 1246 aaKnown RBP9.69□□□□□ -0.86
COL8A1-203ENST00000452013 XKR4Q5GH76 650 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 TMC7Q7Z402 723 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 CD302Q8IX05 232 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 COLGALT2Q8IYK4 626 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 FMR1NBQ8N0W7 255 aaPredicted RBP9.69□□□□□ -0.86
COL8A1-203ENST00000452013 GSTCDQ8NEC7 633 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 ZNF507Q8TCN5 953 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 POMGNT1Q8WZA1 660 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 KAT6AQ92794 2004 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 IGSF21Q96ID5 467 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 TIGD1Q96MW7 591 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 MSTO1Q9BUK6 570 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 GOLPH3LQ9H4A5 285 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 NSUN3Q9H649 340 aaKnown RBP9.69□□□□□ -0.86
COL8A1-203ENST00000452013 RPF1Q9H9Y2 349 aaKnown RBP9.69□□□□□ -0.86
COL8A1-203ENST00000452013 NGRNQ9NPE2 291 aaKnown RBP9.69□□□□□ -0.86
COL8A1-203ENST00000452013 EXOC1Q9NV70 894 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 SLC38A7Q9NVC3 462 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 HCSTQ9UBK5 93 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 DNAJB4Q9UDY4 337 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 STYXL1Q9Y6J8 313 aa9.69□□□□□ -0.86
COL8A1-203ENST00000452013 SMIM28A0A1B0GU29 152 aa9.68□□□□□ -0.86
COL8A1-203ENST00000452013 KIAA0391O15091 583 aaKnown RBP9.68□□□□□ -0.86
COL8A1-203ENST00000452013 XPOTO43592 962 aaKnown RBP9.68□□□□□ -0.86
COL8A1-203ENST00000452013 TADA2AO75478 443 aa9.68□□□□□ -0.86
COL8A1-203ENST00000452013 RPN1P04843 607 aaKnown RBP9.68□□□□□ -0.86
COL8A1-203ENST00000452013 KCNE1P15382 129 aa9.68□□□□□ -0.86
COL8A1-203ENST00000452013 GARTP22102 1010 aa9.68□□□□□ -0.86
COL8A1-203ENST00000452013 CASP1P29466 404 aa9.68□□□□□ -0.86
COL8A1-203ENST00000452013 PBX3P40426 434 aa9.68□□□□□ -0.86
COL8A1-203ENST00000452013 FAM160A1Q05DH4 1040 aa9.68□□□□□ -0.86
COL8A1-203ENST00000452013 DSC1Q08554 894 aa9.68□□□□□ -0.86
COL8A1-203ENST00000452013 KMT5BQ4FZB7 885 aa9.68□□□□□ -0.86
COL8A1-203ENST00000452013 DCLRE1AQ6PJP8 1040 aa9.68□□□□□ -0.86
COL8A1-203ENST00000452013 ALKAL1Q6UXT8 129 aa9.68□□□□□ -0.86
COL8A1-203ENST00000452013 DDX53Q86TM3 631 aaKnown RBP9.68□□□□□ -0.86
COL8A1-203ENST00000452013 ELOA2Q8IYF1 753 aaPredicted RBP9.68□□□□□ -0.86
COL8A1-203ENST00000452013 GRAMD1CQ8IYS0 662 aa9.68□□□□□ -0.86
COL8A1-203ENST00000452013 CEP120Q8N960 986 aa9.68□□□□□ -0.86
COL8A1-203ENST00000452013 TMEM87AQ8NBN3 555 aa9.68□□□□□ -0.86
COL8A1-203ENST00000452013 ENGASEQ8NFI3 743 aa9.68□□□□□ -0.86
COL8A1-203ENST00000452013 DDX27Q96GQ7 796 aaKnown RBP9.68□□□□□ -0.86
COL8A1-203ENST00000452013 UROC1Q96N76 676 aa9.68□□□□□ -0.86
COL8A1-203ENST00000452013 SLC39A2Q9NP94 309 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms