RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 SLFN14P0C7P3 912 aa13.17□□□□□ -0.3
SMPD4-212ENST00000451542 HARSP12081 509 aaKnown RBP13.17□□□□□ -0.3
SMPD4-212ENST00000451542 PROZP22891 400 aa13.17□□□□□ -0.3
SMPD4-212ENST00000451542 NMT1P30419 496 aaKnown RBP13.17□□□□□ -0.3
SMPD4-212ENST00000451542 SYKP43405 635 aa13.17□□□□□ -0.3
SMPD4-212ENST00000451542 OR1G1P47890 313 aa13.17□□□□□ -0.3
SMPD4-212ENST00000451542 TUSC3Q13454 348 aa13.17□□□□□ -0.3
SMPD4-212ENST00000451542 TAS1R3Q7RTX0 852 aa13.17□□□□□ -0.3
SMPD4-212ENST00000451542 TMC7Q7Z402 723 aa13.17□□□□□ -0.3
SMPD4-212ENST00000451542 MAP4K3Q8IVH8 894 aa13.17□□□□□ -0.3
SMPD4-212ENST00000451542 SYCP3Q8IZU3 236 aa13.17□□□□□ -0.3
SMPD4-212ENST00000451542 HLA-CQ95604 372 aa13.17□□□□□ -0.3
SMPD4-212ENST00000451542 DNAJC19Q96DA6 116 aa13.17□□□□□ -0.3
SMPD4-212ENST00000451542 IGSF21Q96ID5 467 aa13.17□□□□□ -0.3
SMPD4-212ENST00000451542 ZFP42Q96MM3 310 aa13.17□□□□□ -0.3
SMPD4-212ENST00000451542 ACCSQ96QU6 501 aa13.17□□□□□ -0.3
SMPD4-212ENST00000451542 C7orf25Q9BPX7 421 aa13.17□□□□□ -0.3
SMPD4-212ENST00000451542 TMEM206Q9H813 350 aa13.17□□□□□ -0.3
SMPD4-212ENST00000451542 PTPRHQ9HD43 1115 aa13.17□□□□□ -0.3
SMPD4-212ENST00000451542 SLC38A7Q9NVC3 462 aa13.17□□□□□ -0.3
SMPD4-212ENST00000451542 HCSTQ9UBK5 93 aa13.17□□□□□ -0.3
SMPD4-212ENST00000451542 SSX2IPQ9Y2D8 614 aa13.17□□□□□ -0.3
SMPD4-212ENST00000451542 USP20Q9Y2K6 914 aa13.17□□□□□ -0.3
SMPD4-212ENST00000451542 MYO7AQ13402 2215 aa13.16□□□□□ -0.3
SMPD4-212ENST00000451542 A0A1B0GVL5 298 aa13.16□□□□□ -0.3
SMPD4-212ENST00000451542 PVALEFA0A1B0GWK0 134 aa13.16□□□□□ -0.3
SMPD4-212ENST00000451542 FRMD3A2A2Y4 597 aa13.16□□□□□ -0.3
SMPD4-212ENST00000451542 NT5C1B-RDH14C9J2C7 533 aa13.16□□□□□ -0.3
SMPD4-212ENST00000451542 DDHD2O94830 711 aa13.16□□□□□ -0.3
SMPD4-212ENST00000451542 CLTAP09496 248 aa13.16□□□□□ -0.3
SMPD4-212ENST00000451542 SRGAP2BP0DMP2 458 aa13.16□□□□□ -0.3
SMPD4-212ENST00000451542 PFKFB1P16118 471 aa13.16□□□□□ -0.3
SMPD4-212ENST00000451542 CA8P35219 290 aa13.16□□□□□ -0.3
SMPD4-212ENST00000451542 SLC11A1P49279 550 aa13.16□□□□□ -0.3
SMPD4-212ENST00000451542 OSTNP61366 133 aa13.16□□□□□ -0.3
SMPD4-212ENST00000451542 MCL1Q07820 350 aa13.16□□□□□ -0.3
SMPD4-212ENST00000451542 HSP90AA2PQ14568 343 aaPredicted RBP13.16□□□□□ -0.3
SMPD4-212ENST00000451542 SMC1AQ14683 1233 aaKnown RBP13.16□□□□□ -0.3
SMPD4-212ENST00000451542 KANK3Q6NY19 840 aa13.16□□□□□ -0.3
SMPD4-212ENST00000451542 CNNM4Q6P4Q7 775 aa13.16□□□□□ -0.3
SMPD4-212ENST00000451542 DDX53Q86TM3 631 aaKnown RBP13.16□□□□□ -0.3
SMPD4-212ENST00000451542 ZNF280BQ86YH2 543 aa13.16□□□□□ -0.3
SMPD4-212ENST00000451542 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.16□□□□□ -0.3
SMPD4-212ENST00000451542 COLGALT2Q8IYK4 626 aa13.16□□□□□ -0.3
SMPD4-212ENST00000451542 FSIP1Q8NA03 581 aa13.16□□□□□ -0.3
SMPD4-212ENST00000451542 ATXN2LQ8WWM7 1075 aaKnown RBP13.16□□□□□ -0.3
SMPD4-212ENST00000451542 STAMQ92783 540 aa13.16□□□□□ -0.3
SMPD4-212ENST00000451542 UROC1Q96N76 676 aa13.16□□□□□ -0.3
SMPD4-212ENST00000451542 CDCA3Q99618 268 aaPredicted RBP13.16□□□□□ -0.3
SMPD4-212ENST00000451542 TCF25Q9BQ70 676 aa13.16□□□□□ -0.3
SMPD4-212ENST00000451542 PLEKHA5Q9HAU0 1116 aa13.16□□□□□ -0.3
SMPD4-212ENST00000451542 CHMP5Q9NZZ3 219 aa13.16□□□□□ -0.3
SMPD4-212ENST00000451542 CITO14578 2027 aa13.16□□□□□ -0.3
SMPD4-212ENST00000451542 NRP1O14786 923 aa13.15□□□□□ -0.3
SMPD4-212ENST00000451542 XPOTO43592 962 aaKnown RBP13.15□□□□□ -0.3
SMPD4-212ENST00000451542 CSPG5O95196 566 aa13.15□□□□□ -0.3
SMPD4-212ENST00000451542 EDN1P05305 212 aa13.15□□□□□ -0.3
SMPD4-212ENST00000451542 PBX3P40426 434 aa13.15□□□□□ -0.3
SMPD4-212ENST00000451542 AFMP43652 599 aa13.15□□□□□ -0.3
SMPD4-212ENST00000451542 DSC1Q08554 894 aa13.15□□□□□ -0.3
SMPD4-212ENST00000451542 ELAVL2Q12926 359 aaKnown RBP13.15□□□□□ -0.3
SMPD4-212ENST00000451542 TCEAL5Q5H9L2 206 aa13.15□□□□□ -0.3
SMPD4-212ENST00000451542 KIAA1841Q6NSI8 718 aa13.15□□□□□ -0.3
SMPD4-212ENST00000451542 EP400NLQ6ZTU2 488 aa13.15□□□□□ -0.3
SMPD4-212ENST00000451542 UNC13DQ70J99 1090 aa13.15□□□□□ -0.3
SMPD4-212ENST00000451542 CD302Q8IX05 232 aa13.15□□□□□ -0.3
SMPD4-212ENST00000451542 DDX27Q96GQ7 796 aaKnown RBP13.15□□□□□ -0.3
SMPD4-212ENST00000451542 TSPAN18Q96SJ8 248 aa13.15□□□□□ -0.3
SMPD4-212ENST00000451542 MSTO1Q9BUK6 570 aa13.15□□□□□ -0.3
SMPD4-212ENST00000451542 TLE6Q9H808 572 aa13.15□□□□□ -0.3
SMPD4-212ENST00000451542 TBC1D7Q9P0N9 293 aa13.15□□□□□ -0.3
SMPD4-212ENST00000451542 DNAJB4Q9UDY4 337 aa13.15□□□□□ -0.3
SMPD4-212ENST00000451542 SERTAD1Q9UHV2 236 aa13.15□□□□□ -0.3
SMPD4-212ENST00000451542 PRG3Q9Y2Y8 225 aaPredicted RBP13.15□□□□□ -0.3
SMPD4-212ENST00000451542 FAM237AA0A1B0GTK4 181 aa13.14□□□□□ -0.31
SMPD4-212ENST00000451542 OGTO15294 1046 aa13.14□□□□□ -0.31
SMPD4-212ENST00000451542 TADA2AO75478 443 aa13.14□□□□□ -0.31
SMPD4-212ENST00000451542 LDHAP00338 332 aaKnown RBP13.14□□□□□ -0.31
SMPD4-212ENST00000451542 URODP06132 367 aa13.14□□□□□ -0.31
SMPD4-212ENST00000451542 AFF1P51825 1210 aaKnown RBP13.14□□□□□ -0.31
SMPD4-212ENST00000451542 MRPS5P82675 430 aaKnown RBP13.14□□□□□ -0.31
SMPD4-212ENST00000451542 PPP2R3AQ06190 1150 aa13.14□□□□□ -0.31
SMPD4-212ENST00000451542 COASYQ13057 564 aa13.14□□□□□ -0.31
SMPD4-212ENST00000451542 TPRNQ4KMQ1 711 aa13.14□□□□□ -0.31
SMPD4-212ENST00000451542 ZC2HC1CQ53FD0 456 aaPredicted RBP13.14□□□□□ -0.31
SMPD4-212ENST00000451542 FAM26FQ5R3K3 315 aa13.14□□□□□ -0.31
SMPD4-212ENST00000451542 L1TD1Q5T7N2 865 aaKnown RBP13.14□□□□□ -0.31
SMPD4-212ENST00000451542 VPS52Q8N1B4 723 aa13.14□□□□□ -0.31
SMPD4-212ENST00000451542 GSTCDQ8NEC7 633 aa13.14□□□□□ -0.31
SMPD4-212ENST00000451542 POMGNT1Q8WZA1 660 aa13.14□□□□□ -0.31
SMPD4-212ENST00000451542 PABPC5Q96DU9 382 aaKnown RBP13.14□□□□□ -0.31
SMPD4-212ENST00000451542 ZBTB45Q96K62 511 aaPredicted RBP13.14□□□□□ -0.31
SMPD4-212ENST00000451542 FIZ1Q96SL8 496 aa13.14□□□□□ -0.31
SMPD4-212ENST00000451542 RPF1Q9H9Y2 349 aaKnown RBP13.14□□□□□ -0.31
SMPD4-212ENST00000451542 GDPD2Q9HCC8 539 aa13.14□□□□□ -0.31
SMPD4-212ENST00000451542 MIOSQ9NXC5 875 aa13.14□□□□□ -0.31
SMPD4-212ENST00000451542 HOOK1Q9UJC3 728 aaKnown RBP13.14□□□□□ -0.31
SMPD4-212ENST00000451542 FAM50BQ9Y247 325 aa13.14□□□□□ -0.31
SMPD4-212ENST00000451542 HPSEQ9Y251 543 aa13.14□□□□□ -0.31
SMPD4-212ENST00000451542 PLXNA4Q9HCM2 1894 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms