RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 KLHL23Q8NBE8 558 aa15.72■□□□□ 0.11
COL3A1-203ENST00000450867 SPPL3Q8TCT6 385 aa15.72■□□□□ 0.11
COL3A1-203ENST00000450867 MRPL38Q96DV4 380 aaKnown RBP15.72■□□□□ 0.11
COL3A1-203ENST00000450867 ZBTB45Q96K62 511 aaPredicted RBP15.72■□□□□ 0.11
COL3A1-203ENST00000450867 ZFP42Q96MM3 310 aa15.72■□□□□ 0.11
COL3A1-203ENST00000450867 TMEM175Q9BSA9 504 aa15.72■□□□□ 0.11
COL3A1-203ENST00000450867 FGFBP2Q9BYJ0 223 aa15.72■□□□□ 0.11
COL3A1-203ENST00000450867 NRDE2Q9H7Z3 1164 aa15.72■□□□□ 0.11
COL3A1-203ENST00000450867 MIOSQ9NXC5 875 aa15.72■□□□□ 0.11
COL3A1-203ENST00000450867 INPP5FQ9Y2H2 1132 aa15.72■□□□□ 0.11
COL3A1-203ENST00000450867 PRUNE2Q8WUY3 3088 aa15.71■□□□□ 0.11
COL3A1-203ENST00000450867 A0A0B4J269 797 aa15.71■□□□□ 0.11
COL3A1-203ENST00000450867 PTGESO14684 152 aa15.71■□□□□ 0.11
COL3A1-203ENST00000450867 GRM6O15303 877 aa15.71■□□□□ 0.11
COL3A1-203ENST00000450867 EIF3DO15371 548 aaKnown RBP eCLIP15.71■□□□□ 0.11
COL3A1-203ENST00000450867 DDHD2O94830 711 aa15.71■□□□□ 0.11
COL3A1-203ENST00000450867 CASP1P29466 404 aa15.71■□□□□ 0.11
COL3A1-203ENST00000450867 AFMP43652 599 aa15.71■□□□□ 0.11
COL3A1-203ENST00000450867 LIG4P49917 911 aa15.71■□□□□ 0.11
COL3A1-203ENST00000450867 SCNN1GP51170 649 aa15.71■□□□□ 0.11
COL3A1-203ENST00000450867 BCAR1P56945 870 aa15.71■□□□□ 0.11
COL3A1-203ENST00000450867 FAM160A1Q05DH4 1040 aa15.71■□□□□ 0.11
COL3A1-203ENST00000450867 GRIK3Q13003 919 aa15.71■□□□□ 0.11
COL3A1-203ENST00000450867 SNW1Q13573 536 aaKnown RBP15.71■□□□□ 0.11
COL3A1-203ENST00000450867 CAMK1Q14012 370 aa15.71■□□□□ 0.11
COL3A1-203ENST00000450867 KYAT1Q16773 422 aa15.71■□□□□ 0.11
COL3A1-203ENST00000450867 FAM26FQ5R3K3 315 aa15.71■□□□□ 0.11
COL3A1-203ENST00000450867 ZNF280BQ86YH2 543 aa15.71■□□□□ 0.11
COL3A1-203ENST00000450867 COLGALT2Q8IYK4 626 aa15.71■□□□□ 0.11
COL3A1-203ENST00000450867 GRAMD1CQ8IYS0 662 aa15.71■□□□□ 0.11
COL3A1-203ENST00000450867 CEP120Q8N960 986 aa15.71■□□□□ 0.11
COL3A1-203ENST00000450867 ACCSQ96QU6 501 aa15.71■□□□□ 0.11
COL3A1-203ENST00000450867 CCDC94Q9BW85 323 aaPredicted RBP15.71■□□□□ 0.11
COL3A1-203ENST00000450867 APOL6Q9BWW8 343 aa15.71■□□□□ 0.11
COL3A1-203ENST00000450867 UBE4BO95155 1302 aa15.7■□□□□ 0.1
COL3A1-203ENST00000450867 GOLGA6L4A6NEF3 574 aa15.7■□□□□ 0.1
COL3A1-203ENST00000450867 FGF18O76093 207 aa15.7■□□□□ 0.1
COL3A1-203ENST00000450867 GCNT3O95395 438 aa15.7■□□□□ 0.1
COL3A1-203ENST00000450867 ADRB2P07550 413 aa15.7■□□□□ 0.1
COL3A1-203ENST00000450867 GALTP07902 379 aa15.7■□□□□ 0.1
COL3A1-203ENST00000450867 MYBP10242 640 aa15.7■□□□□ 0.1
COL3A1-203ENST00000450867 ALDH7A1P49419 539 aaKnown RBP15.7■□□□□ 0.1
COL3A1-203ENST00000450867 POU5F1Q01860 360 aaKnown RBP15.7■□□□□ 0.1
COL3A1-203ENST00000450867 RNASELQ05823 741 aaKnown RBP15.7■□□□□ 0.1
COL3A1-203ENST00000450867 KCNA1Q09470 495 aa15.7■□□□□ 0.1
COL3A1-203ENST00000450867 PTPROQ16827 1216 aa15.7■□□□□ 0.1
COL3A1-203ENST00000450867 BMT2Q1RMZ1 405 aa15.7■□□□□ 0.1
COL3A1-203ENST00000450867 SPOUT1Q5T280 376 aaKnown RBP15.7■□□□□ 0.1
COL3A1-203ENST00000450867 KANK3Q6NY19 840 aa15.7■□□□□ 0.1
COL3A1-203ENST00000450867 STXBP4Q6ZWJ1 553 aa15.7■□□□□ 0.1
COL3A1-203ENST00000450867 ZNF507Q8TCN5 953 aa15.7■□□□□ 0.1
COL3A1-203ENST00000450867 BICD1Q96G01 975 aa15.7■□□□□ 0.1
COL3A1-203ENST00000450867 SNX27Q96L92 541 aa15.7■□□□□ 0.1
COL3A1-203ENST00000450867 TIGD1Q96MW7 591 aa15.7■□□□□ 0.1
COL3A1-203ENST00000450867 TCHPQ9BT92 498 aa15.7■□□□□ 0.1
COL3A1-203ENST00000450867 BLZF1Q9H2G9 400 aa15.7■□□□□ 0.1
COL3A1-203ENST00000450867 TOPORSQ9NS56 1045 aaPredicted RBP15.7■□□□□ 0.1
COL3A1-203ENST00000450867 SPG21Q9NZD8 308 aa15.7■□□□□ 0.1
COL3A1-203ENST00000450867 TBC1D7Q9P0N9 293 aa15.7■□□□□ 0.1
COL3A1-203ENST00000450867 ANKFY1Q9P2R3 1169 aa15.7■□□□□ 0.1
COL3A1-203ENST00000450867 DNAJB4Q9UDY4 337 aa15.7■□□□□ 0.1
COL3A1-203ENST00000450867 PARP2Q9UGN5 583 aa15.7■□□□□ 0.1
COL3A1-203ENST00000450867 EXOC7Q9UPT5 735 aa15.7■□□□□ 0.1
COL3A1-203ENST00000450867 ANKRD63C9JTQ0 380 aa15.69■□□□□ 0.1
COL3A1-203ENST00000450867 OGTO15294 1046 aa15.69■□□□□ 0.1
COL3A1-203ENST00000450867 MEFVO15553 781 aaPredicted RBP15.69■□□□□ 0.1
COL3A1-203ENST00000450867 ZC3H11AO75152 810 aaKnown RBP eCLIP15.69■□□□□ 0.1
COL3A1-203ENST00000450867 EFEMP2O95967 443 aa15.69■□□□□ 0.1
COL3A1-203ENST00000450867 POMCP01189 267 aa15.69■□□□□ 0.1
COL3A1-203ENST00000450867 CLTAP09496 248 aa15.69■□□□□ 0.1
COL3A1-203ENST00000450867 KCNE1P15382 129 aa15.69■□□□□ 0.1
COL3A1-203ENST00000450867 DNAJB1P25685 340 aa15.69■□□□□ 0.1
COL3A1-203ENST00000450867 SLC11A1P49279 550 aa15.69■□□□□ 0.1
COL3A1-203ENST00000450867 DPYDQ12882 1025 aa15.69■□□□□ 0.1
COL3A1-203ENST00000450867 SLFN12LQ6IEE8 588 aa15.69■□□□□ 0.1
COL3A1-203ENST00000450867 ZBTB33Q86T24 672 aa15.69■□□□□ 0.1
COL3A1-203ENST00000450867 ELOA2Q8IYF1 753 aaPredicted RBP15.69■□□□□ 0.1
COL3A1-203ENST00000450867 THNSL1Q8IYQ7 743 aa15.69■□□□□ 0.1
COL3A1-203ENST00000450867 GLIS3Q8NEA6 775 aa15.69■□□□□ 0.1
COL3A1-203ENST00000450867 PPP1R10Q96QC0 940 aaKnown RBP15.69■□□□□ 0.1
COL3A1-203ENST00000450867 RPS6KC1Q96S38 1066 aa15.69■□□□□ 0.1
COL3A1-203ENST00000450867 CXCL16Q9H2A7 254 aa15.69■□□□□ 0.1
COL3A1-203ENST00000450867 TMEM206Q9H813 350 aa15.69■□□□□ 0.1
COL3A1-203ENST00000450867 ALG13Q9NP73 1137 aaKnown RBP15.69■□□□□ 0.1
COL3A1-203ENST00000450867 KLK14Q9P0G3 267 aa15.69■□□□□ 0.1
COL3A1-203ENST00000450867 CNTN3Q9P232 1028 aa15.69■□□□□ 0.1
COL3A1-203ENST00000450867 GDAQ9Y2T3 454 aa15.69■□□□□ 0.1
COL3A1-203ENST00000450867 SPTBN5Q9NRC6 3674 aaKnown RBP15.69■□□□□ 0.1
COL3A1-203ENST00000450867 VWA8A3KMH1 1905 aa15.68■□□□□ 0.1
COL3A1-203ENST00000450867 THP07101 528 aa15.68■□□□□ 0.1
COL3A1-203ENST00000450867 ADSSP30520 456 aa15.68■□□□□ 0.1
COL3A1-203ENST00000450867 HOXD13P35453 343 aa15.68■□□□□ 0.1
COL3A1-203ENST00000450867 PBX3P40426 434 aa15.68■□□□□ 0.1
COL3A1-203ENST00000450867 YARSP54577 528 aaKnown RBP15.68■□□□□ 0.1
COL3A1-203ENST00000450867 PSMD2Q13200 908 aa15.68■□□□□ 0.1
COL3A1-203ENST00000450867 TUSC3Q13454 348 aa15.68■□□□□ 0.1
COL3A1-203ENST00000450867 POSTNQ15063 836 aa15.68■□□□□ 0.1
COL3A1-203ENST00000450867 TIGD5Q53EQ6 642 aa15.68■□□□□ 0.1
COL3A1-203ENST00000450867 MAFAQ8NHW3 353 aaPredicted RBP15.68■□□□□ 0.1
COL3A1-203ENST00000450867 POF1BQ8WVV4 589 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms