RNA–Protein interactions for RNA: ENST00000450102.6

SCN5A-208, Transcript of sodium voltage-gated channel alpha subunit 5, human

TSL 1 (best) BASIC

Gene SCN5A, Length 6,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCN5A-208	ENST00000450102	PCDHB6	Q9Y5E3	794 aa		11.45	□□□□□ -0.58
SCN5A-208	ENST00000450102	STAT3	P40763	770 aa		11.45	□□□□□ -0.58
SCN5A-208	ENST00000450102	KIF23	Q02241	960 aa	Predicted RBP	11.45	□□□□□ -0.58
SCN5A-208	ENST00000450102	TNIP3	Q96KP6	325 aa		11.45	□□□□□ -0.58
SCN5A-208	ENST00000450102	YIPF3	Q9GZM5	350 aa		11.45	□□□□□ -0.58
SCN5A-208	ENST00000450102	RNF146	Q9NTX7	359 aa		11.45	□□□□□ -0.58
SCN5A-208	ENST00000450102	GPSM2	P81274	684 aa		11.45	□□□□□ -0.58
SCN5A-208	ENST00000450102	PWP1	Q13610	501 aa		11.45	□□□□□ -0.58
SCN5A-208	ENST00000450102	SF3B3	Q15393	1217 aa	Known RBP	11.45	□□□□□ -0.58
SCN5A-208	ENST00000450102	ALF	Q53S48	1182 aa		11.45	□□□□□ -0.58
SCN5A-208	ENST00000450102	FAM117B	Q6P1L5	589 aa		11.45	□□□□□ -0.58
SCN5A-208	ENST00000450102	HORMAD1	Q86X24	394 aa		11.45	□□□□□ -0.58
SCN5A-208	ENST00000450102	FAM162A	Q96A26	154 aa		11.45	□□□□□ -0.58
SCN5A-208	ENST00000450102	CEP95	Q96GE4	821 aa		11.45	□□□□□ -0.58
SCN5A-208	ENST00000450102	MASTL	Q96GX5	879 aa		11.45	□□□□□ -0.58
SCN5A-208	ENST00000450102	LSG1	Q9H089	658 aa	Known RBP	11.45	□□□□□ -0.58
SCN5A-208	ENST00000450102	CD274	Q9NZQ7	290 aa		11.45	□□□□□ -0.58
SCN5A-208	ENST00000450102	GTF2A1L	Q9UNN4	478 aa		11.45	□□□□□ -0.58
SCN5A-208	ENST00000450102	ZBTB1	Q9Y2K1	713 aa		11.45	□□□□□ -0.58
SCN5A-208	ENST00000450102	RNF123	Q5XPI4	1314 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	CCDC22	O60826	627 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	ELMO2	Q96JJ3	720 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	ERBB4	Q15303	1308 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	SH2B2	O14492	632 aa	Predicted RBP	11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	MRPS26	Q9BYN8	205 aa	Known RBP	11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	ABCB6	Q9NP58	842 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	MPP6	Q9NZW5	540 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	RNF181	Q9P0P0	153 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	CEP72	Q9P209	647 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	PIN4	Q9Y237	131 aa	Known RBP	11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102		A0A087WWV3	80 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	TNPO2	O14787	897 aa	Known RBP	11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	CRK	P46108	304 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	ZNF211	Q13398	564 aa	Predicted RBP	11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	TRIP4	Q15650	581 aa	Predicted RBP	11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	EMB	Q6PCB8	327 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	IYD	Q6PHW0	289 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	SARM1	Q6SZW1	724 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	ATP11C	Q8NB49	1132 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	AGAP3	Q96P47	875 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	TSEN34	Q9BSV6	310 aa	Known RBP	11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	SATB2	Q9UPW6	733 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	HNRNPR	O43390	633 aa	Known RBP	11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	E2F4	Q16254	413 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	ANKS6	Q68DC2	871 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	OR6J1	Q8NGC5	347 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	MAGEB10	Q96LZ2	347 aa	Predicted RBP	11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	PANX2	Q96RD6	677 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	EHD2	Q9NZN4	543 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	ZFAT	Q9P243	1243 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	EIF2AK4	Q9P2K8	1649 aa	Known RBP	11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	ZNF518A	Q6AHZ1	1483 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	MZF1	P28698	734 aa	Predicted RBP	11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	MAGOH	P61326	146 aa	Known RBP	11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	MTHFD1L	Q6UB35	978 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	CYFIP1	Q7L576	1253 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	CDR2L	Q86X02	465 aa	Predicted RBP	11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	ENAH	Q8N8S7	591 aa	Predicted RBP	11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	NSUN7	Q8NE18	718 aa	Known RBP	11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	USP33	Q8TEY7	942 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	BRD8	Q9H0E9	1235 aa		11.44	□□□□□ -0.58
SCN5A-208	ENST00000450102	C3orf70	A6NLC5	250 aa	Predicted RBP	11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	SASH1	O94885	1247 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	RFX3	P48380	749 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	SESN2	P58004	480 aa	Predicted RBP	11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	PSMC5	P62195	406 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	GRAP	Q13588	217 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	KCTD17	Q8N5Z5	321 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	GRAPL	Q8TC17	118 aa	Predicted RBP	11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	CENPT	Q96BT3	561 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	DEPDC7	Q96QD5	511 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	ZSWIM5	Q9P217	1185 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	USP17L10	C9JJH3	530 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	FYN	P06241	537 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	MYBL1	P10243	752 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	BRAF	P15056	766 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	SOX11	P35716	441 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	ALDH18A1	P54886	795 aa	Known RBP	11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	NCKAP1L	P55160	1127 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	KRT17	Q04695	432 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	MTFR1	Q15390	333 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	PTRHD1	Q6GMV3	140 aa	Known RBP	11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	UNC13D	Q70J99	1090 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	OLFM3	Q96PB7	478 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	SEPT5	Q99719	369 aa	Predicted RBP	11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	C17orf80	Q9BSJ5	609 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	C16orf96	A6NNT2	1141 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	AKAP10	O43572	662 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	RASSF9	O75901	435 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	SFN	P31947	248 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	SNX17	Q15036	470 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	ARHGAP17	Q68EM7	881 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	C1orf131	Q8NDD1	294 aa	Known RBP	11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	SHCBP1	Q8NEM2	672 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	THAP11	Q96EK4	314 aa		11.43	□□□□□ -0.58
SCN5A-208	ENST00000450102	TMA16	Q96EY4	203 aa	Known RBP	11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms