RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 MAP4K3Q8IVH8 894 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 FTHL17Q9BXU8 183 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 TRIM5Q9C035 493 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 FAM105AQ9NUU6 356 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 HCSTQ9UBK5 93 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 MAN1B1Q9UKM7 699 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 SLC4A7Q9Y6M7 1214 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 A0A0U1RQF3 1178 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 HNRNPDLO14979 420 aaKnown RBP10.75□□□□□ -0.69
CCDC171-203ENST00000449575 BAIAP3O94812 1187 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 MYL1P05976 194 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 ADSSP30520 456 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 PBX2P40425 430 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 OSTNP61366 133 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 STRN3Q13033 797 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 FBXO38Q6PIJ6 1188 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 SLC24A5Q71RS6 500 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 SPRED2Q7Z698 418 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 ECHDC2Q86YB7 292 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 SMARCE1Q969G3 411 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 TOP1MTQ969P6 601 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 APOL6Q9BWW8 343 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 MRPL4Q9BYD3 311 aaKnown RBP10.75□□□□□ -0.69
CCDC171-203ENST00000449575 RNF216Q9NWF9 866 aaPredicted RBP10.75□□□□□ -0.69
CCDC171-203ENST00000449575 PCDHB2Q9Y5E7 798 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 MEFVO15553 781 aaPredicted RBP10.75□□□□□ -0.69
CCDC171-203ENST00000449575 ARHGEF15O94989 841 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 TUBB4AP04350 444 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 PROZP22891 400 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 AKAP5P24588 427 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 KCNJ6P48051 423 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 GPS2Q13227 327 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 ZNF598Q86UK7 904 aaKnown RBP10.75□□□□□ -0.69
CCDC171-203ENST00000449575 KCNN1Q92952 543 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 BICD1Q96G01 975 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 NUP62CLQ9H1M0 184 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 CDT1Q9H211 546 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 RASSF4Q9H2L5 321 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 CHST12Q9NRB3 414 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 CWC15Q9P013 229 aaKnown RBP10.75□□□□□ -0.69
CCDC171-203ENST00000449575 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.75□□□□□ -0.69
CCDC171-203ENST00000449575 TNFSF13BQ9Y275 285 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 IPPQ9Y573 584 aa10.75□□□□□ -0.69
CCDC171-203ENST00000449575 LCHNA4D1U4 455 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 TGFB1I1O43294 461 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 CD44P16070 742 aaKnown RBP10.74□□□□□ -0.69
CCDC171-203ENST00000449575 ATP2A2P16615 1042 aaKnown RBP10.74□□□□□ -0.69
CCDC171-203ENST00000449575 FAM189BP81408 668 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 TYRO3Q06418 890 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 KCNB1Q14721 858 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 NAA30Q147X3 362 aaPredicted RBP10.74□□□□□ -0.69
CCDC171-203ENST00000449575 SLC27A1Q6PCB7 646 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 AGMOQ6ZNB7 445 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 ELOA2Q8IYF1 753 aaPredicted RBP10.74□□□□□ -0.69
CCDC171-203ENST00000449575 TMEM130Q8N3G9 435 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 ZNF507Q8TCN5 953 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 GSDMAQ96QA5 445 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 KIAA1468Q9P260 1216 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 AXLP30530 894 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 TNFSF9P41273 254 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 PRCPP42785 496 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 LIG4P49917 911 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 ZNF568Q3ZCX4 644 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 CLLU1OSQ5K130 101 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 THNSL1Q8IYQ7 743 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 CBWD1Q9BRT8 395 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 TCHPQ9BT92 498 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 KCND1Q9NSA2 647 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 ARGLU1Q9NWB6 273 aaPredicted RBP10.74□□□□□ -0.69
CCDC171-203ENST00000449575 SNTG2Q9NY99 539 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 KLK14Q9P0G3 267 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 PCDHB13Q9Y5F0 798 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 MYO7AQ13402 2215 aa10.74□□□□□ -0.69
CCDC171-203ENST00000449575 CLIC2O15247 247 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 FAM189A1O60320 539 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 TOM1L1O75674 476 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 GJB5O95377 273 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 PIGRP01833 764 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 AMHP03971 560 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 LRMPQ12912 555 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 PCBP1Q15365 356 aaKnown RBP eCLIP10.73□□□□□ -0.69
CCDC171-203ENST00000449575 RALGAPA2Q2PPJ7 1873 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 PAN2Q504Q3 1202 aaKnown RBP10.73□□□□□ -0.69
CCDC171-203ENST00000449575 MPZL3Q6UWV2 235 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 NYAP1Q6ZVC0 841 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 HERC6Q8IVU3 1022 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 ZFP42Q96MM3 310 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 ACCSQ96QU6 501 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 TRAIPQ9BWF2 469 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 PCIF1Q9H4Z3 704 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 H0YCG3 227 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 SOX1O00570 391 aaPredicted RBP10.73□□□□□ -0.69
CCDC171-203ENST00000449575 N4BP3O15049 544 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 EIF3DO15371 548 aaKnown RBP eCLIP10.73□□□□□ -0.69
CCDC171-203ENST00000449575 ELF2Q15723 593 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 ZNF658Q5TYW1 1059 aaPredicted RBP10.73□□□□□ -0.69
CCDC171-203ENST00000449575 ZPBP2Q6X784 338 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 SYCP3Q8IZU3 236 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 HELQQ8TDG4 1101 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 EEF2KMTQ96G04 330 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms