RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 LEXMQ3ZCV2 418 aa13.09□□□□□ -0.31
LSP1P3-201ENST00000449530 DYMQ7RTS9 669 aa13.09□□□□□ -0.31
LSP1P3-201ENST00000449530 TMC7Q7Z402 723 aa13.09□□□□□ -0.31
LSP1P3-201ENST00000449530 ALYREFQ86V81 257 aaKnown RBP13.09□□□□□ -0.31
LSP1P3-201ENST00000449530 VPS52Q8N1B4 723 aa13.09□□□□□ -0.31
LSP1P3-201ENST00000449530 CEP120Q8N960 986 aa13.09□□□□□ -0.31
LSP1P3-201ENST00000449530 GSTCDQ8NEC7 633 aa13.09□□□□□ -0.31
LSP1P3-201ENST00000449530 AUTS2Q8WXX7 1259 aa13.09□□□□□ -0.31
LSP1P3-201ENST00000449530 BICD1Q96G01 975 aa13.09□□□□□ -0.31
LSP1P3-201ENST00000449530 VN1R3Q9BXE9 311 aa13.09□□□□□ -0.31
LSP1P3-201ENST00000449530 PANK2Q9BZ23 570 aa13.09□□□□□ -0.31
LSP1P3-201ENST00000449530 ZBP1Q9H171 429 aa13.09□□□□□ -0.31
LSP1P3-201ENST00000449530 CXCL16Q9H2A7 254 aa13.09□□□□□ -0.31
LSP1P3-201ENST00000449530 NGRNQ9NPE2 291 aaKnown RBP13.09□□□□□ -0.31
LSP1P3-201ENST00000449530 MARCH5Q9NX47 278 aa13.09□□□□□ -0.31
LSP1P3-201ENST00000449530 CACNG4Q9UBN1 327 aa13.09□□□□□ -0.31
LSP1P3-201ENST00000449530 KCNG1Q9UIX4 513 aa13.09□□□□□ -0.31
LSP1P3-201ENST00000449530 FAN1Q9Y2M0 1017 aa13.09□□□□□ -0.31
LSP1P3-201ENST00000449530 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 F8W810 466 aa13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 H0YCG3 227 aa13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 PTGESO14684 152 aa13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 NRP1O14786 923 aa13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 CUTAO60888 179 aa13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 BRD1O95696 1058 aa13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 LTBRP36941 435 aa13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 ME1P48163 572 aa13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 OSTNP61366 133 aa13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 RBM10P98175 930 aaKnown RBP13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 DLX2Q07687 328 aaPredicted RBP13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 NOLC1Q14978 699 aaKnown RBP eCLIP13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 DUSP6Q16828 381 aa13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 CTC1Q2NKJ3 1217 aa13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 GLRA4Q5JXX5 417 aa13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 MPZL3Q6UWV2 235 aa13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 SV2BQ7L1I2 683 aa13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 HAUS6Q7Z4H7 955 aa13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 DDX53Q86TM3 631 aaKnown RBP13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 FAM178BQ8IXR5 827 aa13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 EFHBQ8N7U6 833 aa13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 KCNG4Q8TDN1 519 aa13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 NTPCRQ9BSD7 190 aaKnown RBP13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 TCHPQ9BT92 498 aa13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 CCDC94Q9BW85 323 aaPredicted RBP13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 PTPRHQ9HD43 1115 aa13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 BARX2Q9UMQ3 279 aaPredicted RBP13.08□□□□□ -0.32
LSP1P3-201ENST00000449530 TCHHQ07283 1943 aa13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 C2orf71A6NGG8 1288 aa13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 CASTOR2A6NHX0 329 aa13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 MYMKA6NI61 221 aa13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 ABLIM1O14639 778 aa13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 HNRNPDLO14979 420 aaKnown RBP13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 TRAK2O60296 914 aa13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 NR1I2O75469 434 aa13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 TOM1L1O75674 476 aa13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 GLP2RO95838 553 aa13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 ALDH2P05091 517 aa13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 MCF2P10911 925 aa13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 PROZP22891 400 aa13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 NMT1P30419 496 aaKnown RBP13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 GRM5P41594 1212 aa13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 MATR3P43243 847 aaKnown RBP eCLIP13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 YARSP54577 528 aaKnown RBP13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 TUSC3Q13454 348 aa13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 BMS1Q14692 1282 aaKnown RBP13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 PTCRAQ6ISU1 281 aaPredicted RBP13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 LLGL2Q6P1M3 1020 aa13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 SHC4Q6S5L8 630 aa13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 SFR1Q86XK3 245 aa13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 VN1R2Q8NFZ6 395 aa13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 RABGGTAQ92696 567 aa13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 DDX12PQ92771 950 aa13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 DHX58Q96C10 678 aa13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 CHAMP1Q96JM3 812 aa13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 ZBTB45Q96K62 511 aaPredicted RBP13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 CFAP45Q9UL16 551 aa13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 ZDHHC9Q9Y397 364 aa13.07□□□□□ -0.32
LSP1P3-201ENST00000449530 PLXNA3P51805 1871 aa13.06□□□□□ -0.32
LSP1P3-201ENST00000449530 FSD2A1L4K1 749 aa13.06□□□□□ -0.32
LSP1P3-201ENST00000449530 THP07101 528 aa13.06□□□□□ -0.32
LSP1P3-201ENST00000449530 CTSAP10619 480 aa13.06□□□□□ -0.32
LSP1P3-201ENST00000449530 IL9P15248 144 aa13.06□□□□□ -0.32
LSP1P3-201ENST00000449530 LIG4P49917 911 aa13.06□□□□□ -0.32
LSP1P3-201ENST00000449530 ADAM15Q13444 863 aa13.06□□□□□ -0.32
LSP1P3-201ENST00000449530 HSP90AA2PQ14568 343 aaPredicted RBP13.06□□□□□ -0.32
LSP1P3-201ENST00000449530 PTPN14Q15678 1187 aa13.06□□□□□ -0.32
LSP1P3-201ENST00000449530 SEZ6Q53EL9 994 aa13.06□□□□□ -0.32
LSP1P3-201ENST00000449530 AXDND1Q5T1B0 1012 aaPredicted RBP13.06□□□□□ -0.32
LSP1P3-201ENST00000449530 ATL3Q6DD88 541 aa13.06□□□□□ -0.32
LSP1P3-201ENST00000449530 ZPBP2Q6X784 338 aa13.06□□□□□ -0.32
LSP1P3-201ENST00000449530 MRPL43Q8N983 215 aaKnown RBP13.06□□□□□ -0.32
LSP1P3-201ENST00000449530 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.06□□□□□ -0.32
LSP1P3-201ENST00000449530 HASPINQ8TF76 798 aa13.06□□□□□ -0.32
LSP1P3-201ENST00000449530 SNX27Q96L92 541 aa13.06□□□□□ -0.32
LSP1P3-201ENST00000449530 FIZ1Q96SL8 496 aa13.06□□□□□ -0.32
LSP1P3-201ENST00000449530 CDCA3Q99618 268 aaPredicted RBP13.06□□□□□ -0.32
LSP1P3-201ENST00000449530 PAAF1Q9BRP4 392 aa13.06□□□□□ -0.32
LSP1P3-201ENST00000449530 HERC2P3Q9BVR0 1158 aa13.06□□□□□ -0.32
LSP1P3-201ENST00000449530 TOPORSQ9NS56 1045 aaPredicted RBP13.06□□□□□ -0.32
LSP1P3-201ENST00000449530 TBX20Q9UMR3 447 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms