RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 ZNF852Q6ZMS4 543 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 CYB5R4Q7L1T6 521 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 CATIPQ7Z7H3 387 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 FAM174AQ8TBP5 190 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 RPP25Q9BUL9 199 aaKnown RBP8.27□□□□□ -1.09
RBM39-218ENST00000449489 HERC2P3Q9BVR0 1158 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 C1QTNF2Q9BXJ5 285 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 LY9Q9HBG7 655 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 DNAJB4Q9UDY4 337 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 CDH7Q9ULB5 785 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 AKT3Q9Y243 479 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 FAN1Q9Y2M0 1017 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 ASXL3Q9C0F0 2248 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 UNC79Q9P2D8 2635 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.26□□□□□ -1.09
RBM39-218ENST00000449489 ERICH2A1L162 156 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 DHX15O43143 795 aaKnown RBP8.26□□□□□ -1.09
RBM39-218ENST00000449489 GAS2O43903 313 aaKnown RBP8.26□□□□□ -1.09
RBM39-218ENST00000449489 FOSP01100 380 aaPredicted RBP8.26□□□□□ -1.09
RBM39-218ENST00000449489 FSHRP23945 695 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 TARSP26639 723 aaKnown RBP8.26□□□□□ -1.09
RBM39-218ENST00000449489 KIF5BP33176 963 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 GNAQP50148 359 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 CLCN3P51790 818 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 SH3BP2P78314 561 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 HNRNPUQ00839 825 aaKnown RBP eCLIP8.26□□□□□ -1.09
RBM39-218ENST00000449489 DSG1Q02413 1049 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 TRDNQ13061 729 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 MTAPQ13126 283 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 LAPTM4AQ15012 233 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 SART3Q15020 963 aaKnown RBP8.26□□□□□ -1.09
RBM39-218ENST00000449489 EML3Q32P44 896 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 SWSAP1Q6NVH7 229 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 EFCAB12Q6NXP0 572 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 PARM1Q6UWI2 310 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 GET4Q7L5D6 327 aaPredicted RBP8.26□□□□□ -1.09
RBM39-218ENST00000449489 MRPL10Q7Z7H8 261 aaKnown RBP8.26□□□□□ -1.09
RBM39-218ENST00000449489 ZNF280BQ86YH2 543 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 KCTD17Q8N5Z5 321 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 MAP4K1Q92918 833 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 FOXJ1Q92949 421 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 PGBD4Q96DM1 585 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 FAM167AQ96KS9 214 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 PPP1R16BQ96T49 567 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 INO80BQ9C086 356 aaPredicted RBP8.26□□□□□ -1.09
RBM39-218ENST00000449489 CHRDQ9H2X0 955 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 PIDD1Q9HB75 910 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.26□□□□□ -1.09
RBM39-218ENST00000449489 CHST7Q9NS84 486 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 FNIP2Q9P278 1114 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 ZMIZ1Q9ULJ6 1067 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 CFAP46Q8IYW2 2715 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 CNTNAP2Q9UHC6 1331 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 PCNX2A6NKB5 2137 aa8.26□□□□□ -1.09
RBM39-218ENST00000449489 HIP1O00291 1037 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 MAN2B1O00754 1011 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 NRP1O14786 923 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 IFIT3O14879 490 aaKnown RBP8.25□□□□□ -1.09
RBM39-218ENST00000449489 TGM5O43548 720 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 GDF9O60383 454 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 B4GALT3O60512 393 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 DDHD2O94830 711 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 POU2F2P09086 479 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 HOXA9P31269 272 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 GLUD2P49448 558 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 CCR3P51677 355 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 AK2P54819 239 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 CREMQ03060 361 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 C20orf194Q5TEA3 1177 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 ZNF746Q6NUN9 644 aaPredicted RBP8.25□□□□□ -1.09
RBM39-218ENST00000449489 TSSK4Q6SA08 328 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 LRSAM1Q6UWE0 723 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 UNQ6494/PRO21346Q6UXR6 183 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 CKAP2LQ8IYA6 745 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 SMAP1Q8IYB5 467 aaPredicted RBP8.25□□□□□ -1.09
RBM39-218ENST00000449489 PLPP7Q8NBV4 271 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 CTCFLQ8NI51 663 aaPredicted RBP8.25□□□□□ -1.09
RBM39-218ENST00000449489 URGCPQ8TCY9 931 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 MBOAT7Q96N66 472 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 MTA3Q9BTC8 594 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 GCOM2Q9BZD3 368 aaPredicted RBP8.25□□□□□ -1.09
RBM39-218ENST00000449489 TBC1D22BQ9NU19 505 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 FAM105AQ9NUU6 356 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 MAP4K5Q9Y4K4 846 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 NOTCH4Q99466 2003 aa8.25□□□□□ -1.09
RBM39-218ENST00000449489 CACNA1EQ15878 2313 aa8.24□□□□□ -1.09
RBM39-218ENST00000449489 ECI2O75521 394 aa8.24□□□□□ -1.09
RBM39-218ENST00000449489 DDAH1O94760 285 aa8.24□□□□□ -1.09
RBM39-218ENST00000449489 PAPSS2O95340 614 aaPredicted RBP8.24□□□□□ -1.09
RBM39-218ENST00000449489 SSBP05455 408 aaKnown RBP eCLIP8.24□□□□□ -1.09
RBM39-218ENST00000449489 HNRNPA1P09651 372 aaKnown RBP eCLIP8.24□□□□□ -1.09
RBM39-218ENST00000449489 SFPQP23246 707 aaKnown RBP eCLIP8.24□□□□□ -1.09
RBM39-218ENST00000449489 SIM2Q14190 667 aaPredicted RBP8.24□□□□□ -1.09
RBM39-218ENST00000449489 ELOAQ14241 798 aaKnown RBP8.24□□□□□ -1.09
RBM39-218ENST00000449489 UBE2SQ16763 222 aa8.24□□□□□ -1.09
RBM39-218ENST00000449489 TWF2Q6IBS0 349 aaKnown RBP8.24□□□□□ -1.09
RBM39-218ENST00000449489 RTL10Q7L3V2 364 aa8.24□□□□□ -1.09
RBM39-218ENST00000449489 PHTF2Q8N3S3 785 aa8.24□□□□□ -1.09
RBM39-218ENST00000449489 IGDCC4Q8TDY8 1250 aa8.24□□□□□ -1.09
RBM39-218ENST00000449489 PIBF1Q8WXW3 757 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms