RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 SEMA6BQ9H3T3 888 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 KRIT1O00522 736 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 HNRNPCP07910 306 aaKnown RBP eCLIP14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 CCDC6Q16204 474 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 UBE2SQ16763 222 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 EDRF1Q3B7T1 1238 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 ACTRT1Q8TDG2 376 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 SLC35B4Q969S0 331 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 PGM2Q96G03 612 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 AP1M1Q9BXS5 423 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 AZI2Q9H6S1 392 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 AMFRQ9UKV5 643 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 CYP11B2P19099 503 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 CCNFP41002 786 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 USP11P51784 963 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 LSAMPQ13449 338 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 QRICH1Q2TAL8 776 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 BTNL9Q6UXG8 535 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 ZBTB8BQ8NAP8 495 aaPredicted RBP14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 NCSTNQ92542 709 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 TXLNGQ9NUQ3 528 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 STOML1Q9UBI4 398 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 SUN2Q9UH99 717 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 A0A1W2PRG0 241 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 GJB6O95452 261 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 VHLP40337 213 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 P3H1Q32P28 736 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 ZC2HC1CQ53FD0 456 aaPredicted RBP14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 TTLL6Q8N841 843 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 DDX12PQ92771 950 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 ZBED3Q96IU2 234 aaPredicted RBP14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 DDX47Q9H0S4 455 aaKnown RBP14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 AIPL1Q9NZN9 384 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 TUBGCP4Q9UGJ1 667 aa14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 ARMCX3Q9UH62 379 aaPredicted RBP14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 RBBP6Q7Z6E9 1792 aaKnown RBP14.38□□□□□ -0.11
SYNGAP1-204ENST00000449372 SMCHD1A6NHR9 2005 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 MEIS2O14770 477 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 SLFN13Q68D06 897 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 RTKN2Q8IZC4 609 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 TTC8Q8TAM2 541 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 LRRC8CQ8TDW0 803 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 VPS33BQ9H267 617 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 CIDEBQ9UHD4 219 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 COMMD3-BMI1R4GMX3 469 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 CYP3A7-CYP3A51PA0A087WV96 503 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 CYP3A7P24462 503 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 ATP5DP30049 168 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 LRRC14Q15048 493 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 MIGA2Q7L4E1 593 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 SMYD1Q8NB12 490 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 BAP1Q92560 729 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 RMDN2Q96LZ7 410 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 DPH5Q9H2P9 285 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 ATAD5Q96QE3 1844 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 F5H6K3 240 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 ENTPD5O75356 428 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 ETS2P15036 469 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 FUT4P22083 530 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 KLRC3Q07444 240 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 ABCB5Q2M3G0 1257 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 TMEM119Q4V9L6 283 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 HERC4Q5GLZ8 1057 aaPredicted RBP14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 EXOC3L1Q86VI1 746 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 AGGF1Q8N302 714 aaeCLIP14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 MTMR14Q8NCE2 650 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 KIAA0895Q8NCT3 520 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 ETNK2Q9NVF9 386 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 KLHL14Q9P2G3 628 aa14.37□□□□□ -0.11
SYNGAP1-204ENST00000449372 MYMKA6NI61 221 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 SUPT3HO75486 399 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 AFPP02771 609 aaKnown RBP14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 SPATA31D3P0C874 917 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 NPEPPSP55786 919 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 TCERG1LQ5VWI1 586 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 SPATA31D4Q6ZUB0 917 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 FAM47EQ6ZV65 393 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 MGARPQ8TDB4 240 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 GATA6Q92908 595 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 NUDT12Q9BQG2 462 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 ZHX3Q9H4I2 956 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 DCLRE1BQ9H816 532 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 AMACRQ9UHK6 382 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 A0A0A6YYK5 440 aaPredicted RBP14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 GDF11O95390 407 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 CNGA2Q16280 664 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 KBTBD12Q3ZCT8 623 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 TAOK1Q7L7X3 1001 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 SLFN12Q8IYM2 578 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 SCG3Q8WXD2 468 aaKnown RBP14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 CLMNQ96JQ2 1002 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 UNC45AQ9H3U1 944 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 PCDH18Q9HCL0 1135 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 NDUFB10O96000 172 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 DPEP1P16444 411 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 LMNB1P20700 586 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 TNNI2P48788 182 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 COASYQ13057 564 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 KIAA1755Q5JYT7 1200 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms