RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 PIK3CDO00329 1044 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 PPP1R11O60927 126 aaPredicted RBP8.72□□□□□ -1.01
LINC00954-202ENST00000449086 SMNDC1O75940 238 aaKnown RBP eCLIP8.72□□□□□ -1.01
LINC00954-202ENST00000449086 NOL4O94818 638 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 FGFR4P22455 802 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 GRB14Q14449 540 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 IFI16Q16666 785 aaKnown RBP8.72□□□□□ -1.01
LINC00954-202ENST00000449086 GDAP1Q8TB36 358 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 LARP4BQ92615 738 aaKnown RBP8.72□□□□□ -1.01
LINC00954-202ENST00000449086 COA7Q96BR5 231 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 AGBL1Q96MI9 1066 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 R3HDMLQ9H3Y0 253 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 RNF146Q9NTX7 359 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 TMEM260Q9NX78 707 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 SLC5A4Q9NY91 659 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 PLXNB2O15031 1838 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 CCDC169A6NNP5 214 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 HSPA8P11142 646 aaKnown RBP8.72□□□□□ -1.01
LINC00954-202ENST00000449086 CCND1P24385 295 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 PMS2P54278 862 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 NCALDP61601 193 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 MXRA7P84157 204 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 FKBP3Q00688 224 aaKnown RBP8.72□□□□□ -1.01
LINC00954-202ENST00000449086 PLS1Q14651 629 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 C11orf91Q3C1V1 193 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 DCAF17Q5H9S7 520 aaPredicted RBP8.72□□□□□ -1.01
LINC00954-202ENST00000449086 GPR142Q7Z601 462 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 MYOCDQ8IZQ8 938 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 CPXCR1Q8N123 301 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 DAGLBQ8NCG7 672 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 FBXO25Q8TCJ0 367 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 CLEC4DQ8WXI8 215 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 DDX12PQ92771 950 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 TSC22D3Q99576 134 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 NUCKS1Q9H1E3 243 aaKnown RBP8.72□□□□□ -1.01
LINC00954-202ENST00000449086 CUEDC2Q9H467 287 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 FAM114A2Q9NRY5 505 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 IRAK4Q9NWZ3 460 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 BIN2Q9UBW5 565 aaPredicted RBP8.72□□□□□ -1.01
LINC00954-202ENST00000449086 TMEM59LQ9UK28 342 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 IVNS1ABPQ9Y6Y0 642 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 CASP8AP2Q9UKL3 1982 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 CCDC188H7C350 402 aa8.71□□□□□ -1.01
LINC00954-202ENST00000449086 HIP1RO75146 1068 aa8.71□□□□□ -1.01
LINC00954-202ENST00000449086 SNUPNO95149 360 aaKnown RBP8.71□□□□□ -1.01
LINC00954-202ENST00000449086 GSTA1P08263 222 aa8.71□□□□□ -1.01
LINC00954-202ENST00000449086 HOXC6P09630 235 aa8.71□□□□□ -1.01
LINC00954-202ENST00000449086 HSPA1AP0DMV8 641 aaKnown RBP8.71□□□□□ -1.01
LINC00954-202ENST00000449086 HSPA1BP0DMV9 641 aaKnown RBP8.71□□□□□ -1.01
LINC00954-202ENST00000449086 ALAS1P13196 640 aa8.71□□□□□ -1.01
LINC00954-202ENST00000449086 MSH2P43246 934 aa8.71□□□□□ -1.01
LINC00954-202ENST00000449086 HSD17B4P51659 736 aa8.71□□□□□ -1.01
LINC00954-202ENST00000449086 EIF3BP55884 814 aaKnown RBP8.71□□□□□ -1.01
LINC00954-202ENST00000449086 DR1Q01658 176 aa8.71□□□□□ -1.01
LINC00954-202ENST00000449086 LRRC63Q05C16 580 aa8.71□□□□□ -1.01
LINC00954-202ENST00000449086 ADCY2Q08462 1091 aa8.71□□□□□ -1.01
LINC00954-202ENST00000449086 MORN1Q5T089 497 aa8.71□□□□□ -1.01
LINC00954-202ENST00000449086 UBAP2Q5T6F2 1119 aaKnown RBP8.71□□□□□ -1.01
LINC00954-202ENST00000449086 SLC30A9Q6PML9 568 aa8.71□□□□□ -1.01
LINC00954-202ENST00000449086 NCAPG2Q86XI2 1143 aa8.71□□□□□ -1.01
LINC00954-202ENST00000449086 GJA10Q969M2 543 aa8.71□□□□□ -1.01
LINC00954-202ENST00000449086 ETAA1Q9NY74 926 aa8.71□□□□□ -1.01
LINC00954-202ENST00000449086 DAAM1Q9Y4D1 1078 aa8.71□□□□□ -1.01
LINC00954-202ENST00000449086 FOXO6A8MYZ6 492 aa8.71□□□□□ -1.02
LINC00954-202ENST00000449086 ASAP2O43150 1006 aa8.71□□□□□ -1.02
LINC00954-202ENST00000449086 MYBP10242 640 aa8.71□□□□□ -1.02
LINC00954-202ENST00000449086 RARAP10276 462 aa8.71□□□□□ -1.02
LINC00954-202ENST00000449086 NEFHP12036 1026 aa8.71□□□□□ -1.02
LINC00954-202ENST00000449086 SLC9A1P19634 815 aa8.71□□□□□ -1.02
LINC00954-202ENST00000449086 GNA11P29992 359 aa8.71□□□□□ -1.02
LINC00954-202ENST00000449086 PDE6CP51160 858 aa8.71□□□□□ -1.02
LINC00954-202ENST00000449086 RNASELQ05823 741 aaKnown RBP8.71□□□□□ -1.02
LINC00954-202ENST00000449086 IRF5Q13568 498 aa8.71□□□□□ -1.02
LINC00954-202ENST00000449086 ZNF268Q14587 947 aaPredicted RBP8.71□□□□□ -1.02
LINC00954-202ENST00000449086 ITIH4Q14624 930 aa8.71□□□□□ -1.02
LINC00954-202ENST00000449086 KCTD2Q14681 263 aa8.71□□□□□ -1.02
LINC00954-202ENST00000449086 CDCA2Q69YH5 1023 aaPredicted RBP8.71□□□□□ -1.02
LINC00954-202ENST00000449086 LRRC55Q6ZSA7 311 aa8.71□□□□□ -1.02
LINC00954-202ENST00000449086 UNC13DQ70J99 1090 aa8.71□□□□□ -1.02
LINC00954-202ENST00000449086 ZNF571Q7Z3V5 609 aaPredicted RBP8.71□□□□□ -1.02
LINC00954-202ENST00000449086 ZNF467Q7Z7K2 595 aaPredicted RBP8.71□□□□□ -1.02
LINC00954-202ENST00000449086 GUF1Q8N442 669 aaKnown RBP8.71□□□□□ -1.02
LINC00954-202ENST00000449086 ACTRT1Q8TDG2 376 aa8.71□□□□□ -1.02
LINC00954-202ENST00000449086 SNX29Q8TEQ0 813 aa8.71□□□□□ -1.02
LINC00954-202ENST00000449086 U2AF1L4Q8WU68 220 aaKnown RBP8.71□□□□□ -1.02
LINC00954-202ENST00000449086 ZNF296Q8WUU4 475 aaPredicted RBP8.71□□□□□ -1.02
LINC00954-202ENST00000449086 USP6NLQ92738 828 aa8.71□□□□□ -1.02
LINC00954-202ENST00000449086 IFT74Q96LB3 600 aa8.71□□□□□ -1.02
LINC00954-202ENST00000449086 MMP19Q99542 508 aa8.71□□□□□ -1.02
LINC00954-202ENST00000449086 PAIP2Q9BPZ3 127 aaKnown RBP8.71□□□□□ -1.02
LINC00954-202ENST00000449086 ZCWPW1Q9H0M4 648 aa8.71□□□□□ -1.02
LINC00954-202ENST00000449086 RAB17Q9H0T7 212 aa8.71□□□□□ -1.02
LINC00954-202ENST00000449086 PORCNQ9H237 461 aa8.71□□□□□ -1.02
LINC00954-202ENST00000449086 SEMA4AQ9H3S1 761 aa8.71□□□□□ -1.02
LINC00954-202ENST00000449086 ETNK1Q9HBU6 452 aa8.71□□□□□ -1.02
LINC00954-202ENST00000449086 RIC8AQ9NPQ8 531 aa8.71□□□□□ -1.02
LINC00954-202ENST00000449086 DNAJC25-GNG10A0A024R161 153 aa8.7□□□□□ -1.02
LINC00954-202ENST00000449086 RBAK-RBAKDNI3L0D1 243 aa8.7□□□□□ -1.02
LINC00954-202ENST00000449086 SUN1O94901 812 aa8.7□□□□□ -1.02
LINC00954-202ENST00000449086 CLSTN1O94985 981 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms