RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 SKIP12755 728 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 PPP1R2P41236 205 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 MCL1Q07820 350 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 STIM1Q13586 685 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 ZSCAN23Q3MJ62 389 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 CENPPQ6IPU0 288 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 PSRC1Q6PGN9 363 aaPredicted RBP8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 MPZL3Q6UWV2 235 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 APBB1IPQ7Z5R6 666 aaPredicted RBP8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 MRPL10Q7Z7H8 261 aaKnown RBP8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 ZBTB33Q86T24 672 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 CRIPAKQ8N1N5 446 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 TMEM174Q8WUU8 243 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 LINC01599Q8WXQ3 324 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 HERVK_113Q902F9 699 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 GDF15Q99988 308 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 ADPGKQ9BRR6 497 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 EIF2AQ9BY44 585 aaKnown RBP8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 HAPLN2Q9GZV7 340 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 SEMA6BQ9H3T3 888 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 AGPAT3Q9NRZ7 376 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 C1orf112Q9NSG2 853 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 FAM105AQ9NUU6 356 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 CGNQ9P2M7 1197 aaKnown RBP8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 PCDHB2Q9Y5E7 798 aa8.25□□□□□ -1.09
AC004540.1-206ENST00000448056 ZMYM2Q9UBW7 1377 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 SYCE3A1L190 88 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 PSMA7O14818 248 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 CLIC2O15247 247 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 NPTXRO95502 500 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 EOMESO95936 686 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 GARTP22102 1010 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 BMP8BP34820 402 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 MATR3P43243 847 aaKnown RBP eCLIP8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 PMS1P54277 932 aaKnown RBP8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 SHHQ15465 462 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 DPCR1Q3MIW9 517 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 DCAF4L1Q3SXM0 396 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 ZNF568Q3ZCX4 644 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 CT47A1Q5JQC4 288 aaPredicted RBP8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 SWT1Q5T5J6 900 aaKnown RBP8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 ANKRD40Q6AI12 368 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 HS2ST1Q7LGA3 356 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 ECHDC2Q86YB7 292 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 C12orf56Q8IXR9 622 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 SMG8Q8ND04 991 aaKnown RBP8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 GOLGA5Q8TBA6 731 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 NELFBQ8WX92 580 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 POMGNT1Q8WZA1 660 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 P2RX5Q93086 422 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 TOP1MTQ969P6 601 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 CBWD1Q9BRT8 395 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 TRIM6Q9C030 488 aaPredicted RBP8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 UBE2OQ9C0C9 1292 aaKnown RBP8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 CDT1Q9H211 546 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 PCIF1Q9H4Z3 704 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 ELAC1Q9H777 363 aaKnown RBP8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 TYW1Q9NV66 732 aaKnown RBP8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 ANO10Q9NW15 660 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 DMAC2Q9NW81 257 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 CXXC1Q9P0U4 656 aaPredicted RBP8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 ANKFY1Q9P2R3 1169 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 TRAF3IP3Q9Y228 551 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 IPPQ9Y573 584 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 PCDHB7Q9Y5E2 793 aa8.24□□□□□ -1.09
AC004540.1-206ENST00000448056 MYH11P35749 1972 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 KIAA0391O15091 583 aaKnown RBP8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 OGTO15294 1046 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 CALUO43852 315 aaPredicted RBP8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 FAM189A1O60320 539 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 AMHP03971 560 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 STAG3L1P0CL83 205 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 CCDC192P0DO97 292 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 CCNE1P24864 410 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 ERCC5P28715 1186 aaPredicted RBP8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 GRM5P41594 1212 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 RAB27AP51159 221 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 WDR5P61964 334 aaKnown RBP8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 LRRC63Q05C16 580 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 TYRO3Q06418 890 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 PAK1Q13153 545 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 ADAM9Q13443 819 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 MYBPC2Q14324 1141 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 NOLC1Q14978 699 aaKnown RBP eCLIP8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 STX1AQ16623 288 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 NFIL3Q16649 462 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 KYAT1Q16773 422 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 EDRF1Q3B7T1 1238 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 ZCWPW2Q504Y3 356 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 C9orf50Q5SZB4 431 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 RASIP1Q5U651 963 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 KLHL10Q6JEL2 608 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 ARMCX5Q6P1M9 558 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 ZNF598Q86UK7 904 aaKnown RBP8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 SLC9A9Q8IVB4 645 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 THNSL1Q8IYQ7 743 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 ZSWIM2Q8NEG5 633 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 PGBD4Q96DM1 585 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms