RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 CYP4F8P98187 520 aa9.08□□□□□ -0.96
SMARCE1-206ENST00000447024 MFSD14CQ5VZR4 134 aa9.08□□□□□ -0.96
SMARCE1-206ENST00000447024 SLFN13Q68D06 897 aa9.08□□□□□ -0.96
SMARCE1-206ENST00000447024 ERMP1Q7Z2K6 904 aa9.08□□□□□ -0.96
SMARCE1-206ENST00000447024 GGNQ86UU5 652 aa9.08□□□□□ -0.96
SMARCE1-206ENST00000447024 IQCA1Q86XH1 822 aa9.08□□□□□ -0.96
SMARCE1-206ENST00000447024 DGKHQ86XP1 1220 aa9.08□□□□□ -0.96
SMARCE1-206ENST00000447024 TP53I13Q8NBR0 393 aaPredicted RBP9.08□□□□□ -0.96
SMARCE1-206ENST00000447024 DCAF4Q8WV16 495 aa9.08□□□□□ -0.96
SMARCE1-206ENST00000447024 KRT23Q9C075 422 aa9.08□□□□□ -0.96
SMARCE1-206ENST00000447024 GFOD1Q9NXC2 390 aa9.08□□□□□ -0.96
SMARCE1-206ENST00000447024 FBXO40Q9UH90 709 aa9.08□□□□□ -0.96
SMARCE1-206ENST00000447024 NRBP1Q9UHY1 535 aa9.08□□□□□ -0.96
SMARCE1-206ENST00000447024 ACSL6Q9UKU0 697 aa9.08□□□□□ -0.96
SMARCE1-206ENST00000447024 ZNF214Q9UL59 606 aaPredicted RBP9.08□□□□□ -0.96
SMARCE1-206ENST00000447024 STX8Q9UNK0 236 aa9.08□□□□□ -0.96
SMARCE1-206ENST00000447024 DIS3Q9Y2L1 958 aaKnown RBP9.08□□□□□ -0.96
SMARCE1-206ENST00000447024 CTDP1Q9Y5B0 961 aaPredicted RBP9.08□□□□□ -0.96
SMARCE1-206ENST00000447024 PLXNB2O15031 1838 aa9.08□□□□□ -0.96
SMARCE1-206ENST00000447024 CEP290O15078 2479 aa9.07□□□□□ -0.96
SMARCE1-206ENST00000447024 A0A1W2PQ45 241 aaPredicted RBP9.07□□□□□ -0.96
SMARCE1-206ENST00000447024 A0A1W2PQY0 241 aa9.07□□□□□ -0.96
SMARCE1-206ENST00000447024 ZC3H12DA2A288 527 aaKnown RBP9.07□□□□□ -0.96
SMARCE1-206ENST00000447024 BUB1BO60566 1050 aaPredicted RBP9.07□□□□□ -0.96
SMARCE1-206ENST00000447024 EN2P19622 333 aaPredicted RBP9.07□□□□□ -0.96
SMARCE1-206ENST00000447024 BMP8BP34820 402 aa9.07□□□□□ -0.96
SMARCE1-206ENST00000447024 TMEM132BQ14DG7 1078 aa9.07□□□□□ -0.96
SMARCE1-206ENST00000447024 TKFCQ3LXA3 575 aa9.07□□□□□ -0.96
SMARCE1-206ENST00000447024 BMP2KLQ5H9B9 411 aa9.07□□□□□ -0.96
SMARCE1-206ENST00000447024 FAM47AQ5JRC9 791 aa9.07□□□□□ -0.96
SMARCE1-206ENST00000447024 WDR78Q5VTH9 848 aa9.07□□□□□ -0.96
SMARCE1-206ENST00000447024 RPTNQ6XPR3 784 aa9.07□□□□□ -0.96
SMARCE1-206ENST00000447024 NLRC3Q7RTR2 1065 aa9.07□□□□□ -0.96
SMARCE1-206ENST00000447024 MSL3Q8N5Y2 521 aaKnown RBP9.07□□□□□ -0.96
SMARCE1-206ENST00000447024 REPS2Q8NFH8 660 aa9.07□□□□□ -0.96
SMARCE1-206ENST00000447024 U2AF1L4Q8WU68 220 aaKnown RBP9.07□□□□□ -0.96
SMARCE1-206ENST00000447024 ANKS1AQ92625 1134 aa9.07□□□□□ -0.96
SMARCE1-206ENST00000447024 MAF1Q9H063 256 aa9.07□□□□□ -0.96
SMARCE1-206ENST00000447024 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.07□□□□□ -0.96
SMARCE1-206ENST00000447024 SLC38A10Q9HBR0 1119 aa9.07□□□□□ -0.96
SMARCE1-206ENST00000447024 IL17RBQ9NRM6 502 aa9.07□□□□□ -0.96
SMARCE1-206ENST00000447024 TOMM22Q9NS69 142 aa9.07□□□□□ -0.96
SMARCE1-206ENST00000447024 LAMA4Q16363 1823 aa9.06□□□□□ -0.96
SMARCE1-206ENST00000447024 SGSM2O43147 1006 aa9.06□□□□□ -0.96
SMARCE1-206ENST00000447024 GREM1O60565 184 aa9.06□□□□□ -0.96
SMARCE1-206ENST00000447024 ADRB1P08588 477 aa9.06□□□□□ -0.96
SMARCE1-206ENST00000447024 CYP2B6P20813 491 aa9.06□□□□□ -0.96
SMARCE1-206ENST00000447024 ADORA2AP29274 412 aa9.06□□□□□ -0.96
SMARCE1-206ENST00000447024 CCNFP41002 786 aa9.06□□□□□ -0.96
SMARCE1-206ENST00000447024 TAGLNQ01995 201 aaKnown RBP9.06□□□□□ -0.96
SMARCE1-206ENST00000447024 PLS1Q14651 629 aa9.06□□□□□ -0.96
SMARCE1-206ENST00000447024 KCTD2Q14681 263 aa9.06□□□□□ -0.96
SMARCE1-206ENST00000447024 CBX2Q14781 532 aaPredicted RBP9.06□□□□□ -0.96
SMARCE1-206ENST00000447024 GPATCH4Q5T3I0 446 aaKnown RBP9.06□□□□□ -0.96
SMARCE1-206ENST00000447024 BTNL9Q6UXG8 535 aa9.06□□□□□ -0.96
SMARCE1-206ENST00000447024 DPP9Q86TI2 863 aa9.06□□□□□ -0.96
SMARCE1-206ENST00000447024 LRRC47Q8N1G4 583 aaKnown RBP9.06□□□□□ -0.96
SMARCE1-206ENST00000447024 CHST13Q8NET6 341 aa9.06□□□□□ -0.96
SMARCE1-206ENST00000447024 TRIB2Q92519 343 aa9.06□□□□□ -0.96
SMARCE1-206ENST00000447024 HTATIP2Q9BUP3 242 aa9.06□□□□□ -0.96
SMARCE1-206ENST00000447024 MKRN2Q9H000 416 aaKnown RBP9.06□□□□□ -0.96
SMARCE1-206ENST00000447024 EHMT1Q9H9B1 1298 aa9.06□□□□□ -0.96
SMARCE1-206ENST00000447024 FBXO28Q9NVF7 368 aa9.06□□□□□ -0.96
SMARCE1-206ENST00000447024 IMPACTQ9P2X3 320 aa9.06□□□□□ -0.96
SMARCE1-206ENST00000447024 BRCA2P51587 3418 aa9.06□□□□□ -0.96
SMARCE1-206ENST00000447024 TMEM232C9JQI7 657 aa9.05□□□□□ -0.96
SMARCE1-206ENST00000447024 SNHG28P0DPA3 235 aa9.05□□□□□ -0.96
SMARCE1-206ENST00000447024 EIF4A3P38919 411 aaKnown RBP9.05□□□□□ -0.96
SMARCE1-206ENST00000447024 TRDNQ13061 729 aa9.05□□□□□ -0.96
SMARCE1-206ENST00000447024 RRP12Q5JTH9 1297 aaKnown RBP9.05□□□□□ -0.96
SMARCE1-206ENST00000447024 CRTC3Q6UUV7 619 aa9.05□□□□□ -0.96
SMARCE1-206ENST00000447024 FRMD5Q7Z6J6 570 aa9.05□□□□□ -0.96
SMARCE1-206ENST00000447024 UBE2Q1Q7Z7E8 422 aa9.05□□□□□ -0.96
SMARCE1-206ENST00000447024 TBC1D10CQ8IV04 446 aa9.05□□□□□ -0.96
SMARCE1-206ENST00000447024 TMEM192Q8IY95 271 aa9.05□□□□□ -0.96
SMARCE1-206ENST00000447024 MTA3Q9BTC8 594 aa9.05□□□□□ -0.96
SMARCE1-206ENST00000447024 AP5S1Q9NUS5 200 aa9.05□□□□□ -0.96
SMARCE1-206ENST00000447024 OGDHLQ9ULD0 1010 aa9.05□□□□□ -0.96
SMARCE1-206ENST00000447024 PCDHB12Q9Y5F1 795 aa9.05□□□□□ -0.96
SMARCE1-206ENST00000447024 ZNFX1Q9P2E3 1918 aaKnown RBP9.05□□□□□ -0.96
SMARCE1-206ENST00000447024 MKI67P46013 3256 aaKnown RBP9.04□□□□□ -0.96
SMARCE1-206ENST00000447024 COL11A1P12107 1806 aaPredicted RBP9.04□□□□□ -0.96
SMARCE1-206ENST00000447024 LOC102724159A0A0B4J2E5 919 aa9.04□□□□□ -0.96
SMARCE1-206ENST00000447024 TFRCP02786 760 aaKnown RBP9.04□□□□□ -0.96
SMARCE1-206ENST00000447024 MCCP23508 829 aa9.04□□□□□ -0.96
SMARCE1-206ENST00000447024 HAND2P61296 217 aa9.04□□□□□ -0.96
SMARCE1-206ENST00000447024 CACNB2Q08289 660 aaPredicted RBP9.04□□□□□ -0.96
SMARCE1-206ENST00000447024 IKQ13123 557 aaPredicted RBP9.04□□□□□ -0.96
SMARCE1-206ENST00000447024 PWP2Q15269 919 aaKnown RBP9.04□□□□□ -0.96
SMARCE1-206ENST00000447024 PLEKHN1Q494U1 663 aaPredicted RBP9.04□□□□□ -0.96
SMARCE1-206ENST00000447024 SNRNP48Q6IEG0 339 aaKnown RBP9.04□□□□□ -0.96
SMARCE1-206ENST00000447024 CASC1Q6TDU7 716 aa9.04□□□□□ -0.96
SMARCE1-206ENST00000447024 MAP4K1Q92918 833 aa9.04□□□□□ -0.96
SMARCE1-206ENST00000447024 DEFB118Q96PH6 123 aa9.04□□□□□ -0.96
SMARCE1-206ENST00000447024 JMJD8Q96S16 334 aa9.04□□□□□ -0.96
SMARCE1-206ENST00000447024 MMP19Q99542 508 aa9.04□□□□□ -0.96
SMARCE1-206ENST00000447024 NUP88Q99567 741 aaPredicted RBP9.04□□□□□ -0.96
SMARCE1-206ENST00000447024 TMEM47Q9BQJ4 181 aa9.04□□□□□ -0.96
SMARCE1-206ENST00000447024 PFASO15067 1338 aa9.04□□□□□ -0.96
SMARCE1-206ENST00000447024 TNRC18O15417 2968 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms