RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 KRT35Q92764 455 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 MSTO1Q9BUK6 570 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 NFASCO94856 1347 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 PGRMC1O00264 195 aaKnown RBP18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 TMEM132AQ24JP5 1023 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 SH3D19Q5HYK7 790 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 TMEM130Q8N3G9 435 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 HELQQ8TDG4 1101 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 LMBR1Q8WVP7 490 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 SPIRE2Q8WWL2 714 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 DPH5Q9H2P9 285 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 PDGFCQ9NRA1 345 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 ARHGAP28Q9P2N2 729 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 RSPH14Q9UHP6 348 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 GOLGA6BA6NDN3 693 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 PIK3CAP42336 1068 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 DAB2IPQ5VWQ8 1189 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 RIOX2Q8IUF8 465 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 AENQ8WTP8 325 aaKnown RBP18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 ZNF653Q96CK0 615 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 RABEP2Q9H5N1 569 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 FAM204AQ9H8W3 233 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 PDLIM7Q9NR12 457 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 ANKRD62A6NC57 917 aa18.09■□□□□ 0.49
LAPTM4B-201ENST00000445593 PDE6CP51160 858 aa18.09■□□□□ 0.49
LAPTM4B-201ENST00000445593 TNNC1P63316 161 aa18.09■□□□□ 0.49
LAPTM4B-201ENST00000445593 PPP1R13LQ8WUF5 828 aa18.09■□□□□ 0.49
LAPTM4B-201ENST00000445593 ALG3Q92685 438 aa18.09■□□□□ 0.49
LAPTM4B-201ENST00000445593 UPF1Q92900 1129 aaKnown RBP eCLIP18.09■□□□□ 0.494e-10■■■■□ 19.7
LAPTM4B-201ENST00000445593 AZI2Q9H6S1 392 aa18.09■□□□□ 0.49
LAPTM4B-201ENST00000445593 EFCC1Q9HA90 598 aa18.09■□□□□ 0.49
LAPTM4B-201ENST00000445593 RBAKQ9NYW8 714 aaPredicted RBP18.09■□□□□ 0.49
LAPTM4B-201ENST00000445593 CYP11B1P15538 503 aa18.09■□□□□ 0.49
LAPTM4B-201ENST00000445593 TNFSF9P41273 254 aa18.09■□□□□ 0.49
LAPTM4B-201ENST00000445593 BRDTQ58F21 947 aaPredicted RBP18.09■□□□□ 0.49
LAPTM4B-201ENST00000445593 DCAF12L1Q5VU92 463 aa18.09■□□□□ 0.49
LAPTM4B-201ENST00000445593 DNERQ8NFT8 737 aa18.09■□□□□ 0.49
LAPTM4B-201ENST00000445593 PRPF31Q8WWY3 499 aaKnown RBP18.09■□□□□ 0.49
LAPTM4B-201ENST00000445593 NLRP4Q96MN2 994 aa18.09■□□□□ 0.49
LAPTM4B-201ENST00000445593 NTPCRQ9BSD7 190 aaKnown RBP18.09■□□□□ 0.49
LAPTM4B-201ENST00000445593 ACBD3Q9H3P7 528 aa18.09■□□□□ 0.49
LAPTM4B-201ENST00000445593 CLEC11AQ9Y240 323 aa18.09■□□□□ 0.49
LAPTM4B-201ENST00000445593 MAFBQ9Y5Q3 323 aaPredicted RBP18.09■□□□□ 0.49
LAPTM4B-201ENST00000445593 ALG6Q9Y672 507 aa18.09■□□□□ 0.49
LAPTM4B-201ENST00000445593 SART1O43290 800 aaKnown RBP18.08■□□□□ 0.49
LAPTM4B-201ENST00000445593 SYF2O95926 243 aaKnown RBP18.08■□□□□ 0.49
LAPTM4B-201ENST00000445593 FMO1Q01740 532 aa18.08■□□□□ 0.49
LAPTM4B-201ENST00000445593 CPA5Q8WXQ8 436 aa18.08■□□□□ 0.49
LAPTM4B-201ENST00000445593 CAPSQ13938 189 aa18.08■□□□□ 0.48
LAPTM4B-201ENST00000445593 IFT20Q8IY31 132 aa18.08■□□□□ 0.48
LAPTM4B-201ENST00000445593 SYCE1Q8N0S2 351 aa18.08■□□□□ 0.48
LAPTM4B-201ENST00000445593 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.08■□□□□ 0.48
LAPTM4B-201ENST00000445593 TRIM7Q9C029 511 aa18.08■□□□□ 0.48
LAPTM4B-201ENST00000445593 PORCNQ9H237 461 aa18.08■□□□□ 0.48
LAPTM4B-201ENST00000445593 C1orf112Q9NSG2 853 aa18.08■□□□□ 0.48
LAPTM4B-201ENST00000445593 NOCTQ9UK39 431 aaKnown RBP18.08■□□□□ 0.48
LAPTM4B-201ENST00000445593 TRPC6Q9Y210 931 aa18.08■□□□□ 0.48
LAPTM4B-201ENST00000445593 BTNL10A8MVZ5 291 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 TTI1O43156 1089 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 KCTD2Q14681 263 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 ZNF394Q53GI3 561 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 TDRD10Q5VZ19 366 aaKnown RBP18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 KCTD16Q68DU8 428 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 ZNF572Q7Z3I7 529 aaPredicted RBP18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 ERO1BQ86YB8 467 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 FAM71AQ8IYT1 594 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 ANKRD13AQ8IZ07 590 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 OR5B17Q8NGF7 314 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 TRIM51Q9BSJ1 452 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 CENPHQ9H3R5 247 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 RBPJLQ9UBG7 517 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 UMODL1Q5DID0 1318 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 HLA-DRAP01903 254 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 POTEJP0CG39 1038 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 ERVK-9P63128 1117 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 TTC19Q6DKK2 380 aaPredicted RBP18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 RHPN2Q8IUC4 686 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 RNF149Q8NC42 400 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 SLC17A8Q8NDX2 589 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 RNPC3Q96LT9 517 aaKnown RBP18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 MFSD14AQ96MC6 490 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 SYT17Q9BSW7 474 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 NUP85Q9BW27 656 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 LOXHD1Q8IVV2 1947 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 CFHP08603 1231 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 SHC3Q92529 594 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 SPATA33Q96N06 139 aa18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 DHX33Q9H6R0 707 aaKnown RBP18.07■□□□□ 0.48
LAPTM4B-201ENST00000445593 MCM3APO60318 1980 aa18.06■□□□□ 0.48
LAPTM4B-201ENST00000445593 P4HA2O15460 535 aa18.06■□□□□ 0.48
LAPTM4B-201ENST00000445593 SPOPO43791 374 aa18.06■□□□□ 0.48
LAPTM4B-201ENST00000445593 CNMDO75829 334 aa18.06■□□□□ 0.48
LAPTM4B-201ENST00000445593 COMTP21964 271 aa18.06■□□□□ 0.48
LAPTM4B-201ENST00000445593 GJC1P36383 396 aa18.06■□□□□ 0.48
LAPTM4B-201ENST00000445593 GPC5P78333 572 aa18.06■□□□□ 0.48
LAPTM4B-201ENST00000445593 PBKQ96KB5 322 aa18.06■□□□□ 0.48
LAPTM4B-201ENST00000445593 RUFY1Q96T51 708 aa18.06■□□□□ 0.48
LAPTM4B-201ENST00000445593 SUCLA2Q9P2R7 463 aaPredicted RBP18.06■□□□□ 0.48
LAPTM4B-201ENST00000445593 STXBP5LQ9Y2K9 1186 aa18.06■□□□□ 0.48
LAPTM4B-201ENST00000445593 WDR81Q562E7 1941 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms