RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 OR14A2Q96R54 314 aa5.9□□□□□ -1.46
HMGB3P6-201ENST00000444896 CDC5LQ99459 802 aaKnown RBP5.9□□□□□ -1.46
HMGB3P6-201ENST00000444896 SLC30A1Q9Y6M5 507 aa5.9□□□□□ -1.46
HMGB3P6-201ENST00000444896 PATE3B3GLJ2 98 aa5.89□□□□□ -1.47
HMGB3P6-201ENST00000444896 SGTAO43765 313 aa5.89□□□□□ -1.47
HMGB3P6-201ENST00000444896 ALOX15P16050 662 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P6-201ENST00000444896 FPR1P21462 350 aa5.89□□□□□ -1.47
HMGB3P6-201ENST00000444896 PCSK1P29120 753 aa5.89□□□□□ -1.47
HMGB3P6-201ENST00000444896 PTPN7P35236 360 aa5.89□□□□□ -1.47
HMGB3P6-201ENST00000444896 CDC42EP1Q00587 391 aa5.89□□□□□ -1.47
HMGB3P6-201ENST00000444896 CSRP2Q16527 193 aa5.89□□□□□ -1.47
HMGB3P6-201ENST00000444896 FAM47AQ5JRC9 791 aa5.89□□□□□ -1.47
HMGB3P6-201ENST00000444896 Q6ZSN1 163 aa5.89□□□□□ -1.47
HMGB3P6-201ENST00000444896 CIR1Q86X95 450 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P6-201ENST00000444896 WDR75Q8IWA0 830 aaKnown RBP5.89□□□□□ -1.47
HMGB3P6-201ENST00000444896 Q8TCH9 128 aa5.89□□□□□ -1.47
HMGB3P6-201ENST00000444896 NSUN6Q8TEA1 469 aaKnown RBP5.89□□□□□ -1.47
HMGB3P6-201ENST00000444896 MVB12AQ96EY5 273 aa5.89□□□□□ -1.47
HMGB3P6-201ENST00000444896 CYFIP2Q96F07 1278 aa5.89□□□□□ -1.47
HMGB3P6-201ENST00000444896 ZNF512Q96ME7 567 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P6-201ENST00000444896 UHRF1Q96T88 793 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P6-201ENST00000444896 KRTAP9-9Q9BYP9 154 aa5.89□□□□□ -1.47
HMGB3P6-201ENST00000444896 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
HMGB3P6-201ENST00000444896 MANSC1Q9H8J5 431 aa5.89□□□□□ -1.47
HMGB3P6-201ENST00000444896 LANCL2Q9NS86 450 aa5.89□□□□□ -1.47
HMGB3P6-201ENST00000444896 AJAP1Q9UKB5 411 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P6-201ENST00000444896 SH3BP1Q9Y3L3 701 aa5.89□□□□□ -1.47
HMGB3P6-201ENST00000444896 OFD1O75665 1012 aa5.88□□□□□ -1.47
HMGB3P6-201ENST00000444896 HSPA6P17066 643 aa5.88□□□□□ -1.47
HMGB3P6-201ENST00000444896 MSX2P35548 267 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P6-201ENST00000444896 SP140Q13342 867 aa5.88□□□□□ -1.47
HMGB3P6-201ENST00000444896 MTM1Q13496 603 aa5.88□□□□□ -1.47
HMGB3P6-201ENST00000444896 ICAM4Q14773 271 aa5.88□□□□□ -1.47
HMGB3P6-201ENST00000444896 FKBP15Q5T1M5 1219 aa5.88□□□□□ -1.47
HMGB3P6-201ENST00000444896 ANKS6Q68DC2 871 aa5.88□□□□□ -1.47
HMGB3P6-201ENST00000444896 DIS3LQ8TF46 1054 aaKnown RBP5.88□□□□□ -1.47
HMGB3P6-201ENST00000444896 ARL8AQ96BM9 186 aa5.88□□□□□ -1.47
HMGB3P6-201ENST00000444896 RUNDC1Q96C34 613 aa5.88□□□□□ -1.47
HMGB3P6-201ENST00000444896 WWC2-AS2Q96NR7 200 aa5.88□□□□□ -1.47
HMGB3P6-201ENST00000444896 TAAR9Q96RI9 348 aa5.88□□□□□ -1.47
HMGB3P6-201ENST00000444896 LSM14BQ9BX40 385 aaKnown RBP5.88□□□□□ -1.47
HMGB3P6-201ENST00000444896 SENP6Q9GZR1 1112 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P6-201ENST00000444896 CD248Q9HCU0 757 aa5.88□□□□□ -1.47
HMGB3P6-201ENST00000444896 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P6-201ENST00000444896 ACTL7AQ9Y615 435 aa5.88□□□□□ -1.47
HMGB3P6-201ENST00000444896 CFAP20Q9Y6A4 193 aaKnown RBP5.88□□□□□ -1.47
HMGB3P6-201ENST00000444896 MYBBP1AQ9BQG0 1328 aaKnown RBP5.88□□□□□ -1.47
HMGB3P6-201ENST00000444896 DDCP20711 480 aa5.87□□□□□ -1.47
HMGB3P6-201ENST00000444896 FLT3LGP49771 235 aa5.87□□□□□ -1.47
HMGB3P6-201ENST00000444896 PGS1Q32NB8 556 aa5.87□□□□□ -1.47
HMGB3P6-201ENST00000444896 MINDY4Q4G0A6 757 aa5.87□□□□□ -1.47
HMGB3P6-201ENST00000444896 SPTY2D1Q68D10 685 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P6-201ENST00000444896 PPP4R3AQ6IN85 833 aa5.87□□□□□ -1.47
HMGB3P6-201ENST00000444896 PDZD4Q76G19 769 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P6-201ENST00000444896 GPRIN1Q7Z2K8 1008 aa5.87□□□□□ -1.47
HMGB3P6-201ENST00000444896 XYLT1Q86Y38 959 aa5.87□□□□□ -1.47
HMGB3P6-201ENST00000444896 DRC7Q8IY82 874 aa5.87□□□□□ -1.47
HMGB3P6-201ENST00000444896 GRAMD1CQ8IYS0 662 aa5.87□□□□□ -1.47
HMGB3P6-201ENST00000444896 SLC35B2Q8TB61 432 aa5.87□□□□□ -1.47
HMGB3P6-201ENST00000444896 IFI44Q8TCB0 444 aa5.87□□□□□ -1.47
HMGB3P6-201ENST00000444896 CASKIN2Q8WXE0 1202 aa5.87□□□□□ -1.47
HMGB3P6-201ENST00000444896 CLPTM1LQ96KA5 538 aa5.87□□□□□ -1.47
HMGB3P6-201ENST00000444896 C8orf48Q96LL4 319 aa5.87□□□□□ -1.47
HMGB3P6-201ENST00000444896 NMRK2Q9NPI5 230 aa5.87□□□□□ -1.47
HMGB3P6-201ENST00000444896 TDP1Q9NUW8 608 aa5.87□□□□□ -1.47
HMGB3P6-201ENST00000444896 PNPLA7Q6ZV29 1317 aa5.86□□□□□ -1.47
HMGB3P6-201ENST00000444896 LRRC14BA6NHZ5 514 aa5.86□□□□□ -1.47
HMGB3P6-201ENST00000444896 CXorf49A8MYA2 514 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P6-201ENST00000444896 ZNF623O75123 536 aa5.86□□□□□ -1.47
HMGB3P6-201ENST00000444896 ALDH2P05091 517 aa5.86□□□□□ -1.47
HMGB3P6-201ENST00000444896 U2AF1L5P0DN76 240 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P6-201ENST00000444896 IL2RBP14784 551 aa5.86□□□□□ -1.47
HMGB3P6-201ENST00000444896 U2AF1Q01081 240 aaKnown RBP eCLIP5.86□□□□□ -1.47
HMGB3P6-201ENST00000444896 AFMIDQ63HM1 303 aa5.86□□□□□ -1.47
HMGB3P6-201ENST00000444896 MAMDC4Q6UXC1 1216 aa5.86□□□□□ -1.47
HMGB3P6-201ENST00000444896 POLNQ7Z5Q5 900 aa5.86□□□□□ -1.47
HMGB3P6-201ENST00000444896 PRRT2Q7Z6L0 340 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P6-201ENST00000444896 TTC7BQ86TV6 843 aa5.86□□□□□ -1.47
HMGB3P6-201ENST00000444896 DCBLD1Q8N8Z6 715 aa5.86□□□□□ -1.47
HMGB3P6-201ENST00000444896 C1GALT1C1Q96EU7 318 aa5.86□□□□□ -1.47
HMGB3P6-201ENST00000444896 TMX3Q96JJ7 454 aa5.86□□□□□ -1.47
HMGB3P6-201ENST00000444896 MPHOSPH9Q99550 1183 aa5.86□□□□□ -1.47
HMGB3P6-201ENST00000444896 MAP3K14Q99558 947 aa5.86□□□□□ -1.47
HMGB3P6-201ENST00000444896 ACO2Q99798 780 aaKnown RBP5.86□□□□□ -1.47
HMGB3P6-201ENST00000444896 MYOCQ99972 504 aa5.86□□□□□ -1.47
HMGB3P6-201ENST00000444896 TMEM140Q9NV12 185 aa5.86□□□□□ -1.47
HMGB3P6-201ENST00000444896 SLC23A1Q9UHI7 598 aa5.86□□□□□ -1.47
HMGB3P6-201ENST00000444896 JAG2Q9Y219 1238 aa5.86□□□□□ -1.47
HMGB3P6-201ENST00000444896 TBKBP1A7MCY6 615 aa5.85□□□□□ -1.47
HMGB3P6-201ENST00000444896 DTNBO60941 627 aa5.85□□□□□ -1.47
HMGB3P6-201ENST00000444896 GPR32O75388 356 aa5.85□□□□□ -1.47
HMGB3P6-201ENST00000444896 ALDH1A3P47895 512 aa5.85□□□□□ -1.47
HMGB3P6-201ENST00000444896 MAP2K6P52564 334 aa5.85□□□□□ -1.47
HMGB3P6-201ENST00000444896 ZNF280AP59817 542 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P6-201ENST00000444896 CTXN1P60606 82 aa5.85□□□□□ -1.47
HMGB3P6-201ENST00000444896 TLE1Q04724 770 aa5.85□□□□□ -1.47
HMGB3P6-201ENST00000444896 KHDC1Q4VXA5 237 aaKnown RBP5.85□□□□□ -1.47
HMGB3P6-201ENST00000444896 OTUD7BQ6GQQ9 843 aa5.85□□□□□ -1.47
HMGB3P6-201ENST00000444896 DOK3Q7L591 496 aa5.85□□□□□ -1.47
HMGB3P6-201ENST00000444896 APBB1IPQ7Z5R6 666 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms