RNA–Protein interactions for RNA: ENST00000444719.5

LMBR1-211, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-211ENST00000444719 SPIRE2Q8WWL2 714 aa24.49■■□□□ 1.51
LMBR1-211ENST00000444719 KHSRPQ92945 711 aaKnown RBP eCLIP24.49■■□□□ 1.511e-6■■■□□ 17.9
LMBR1-211ENST00000444719 REEP2Q9BRK0 252 aa24.49■■□□□ 1.51
LMBR1-211ENST00000444719 COLEC11Q9BWP8 271 aa24.49■■□□□ 1.51
LMBR1-211ENST00000444719 USP15Q9Y4E8 981 aaPredicted RBP24.49■■□□□ 1.51
LMBR1-211ENST00000444719 PTGESO14684 152 aa24.48■■□□□ 1.51
LMBR1-211ENST00000444719 KRT18P05783 430 aaKnown RBP24.48■■□□□ 1.51
LMBR1-211ENST00000444719 THP07101 528 aa24.48■■□□□ 1.51
LMBR1-211ENST00000444719 OSTNP61366 133 aa24.48■■□□□ 1.51
LMBR1-211ENST00000444719 ZP2Q05996 745 aa24.48■■□□□ 1.51
LMBR1-211ENST00000444719 PTPN14Q15678 1187 aa24.48■■□□□ 1.51
LMBR1-211ENST00000444719 ZNF568Q3ZCX4 644 aa24.48■■□□□ 1.51
LMBR1-211ENST00000444719 ANKRD54Q6NXT1 300 aa24.48■■□□□ 1.51
LMBR1-211ENST00000444719 APBB1IPQ7Z5R6 666 aaPredicted RBP24.48■■□□□ 1.51
LMBR1-211ENST00000444719 CEP120Q8N960 986 aa24.48■■□□□ 1.51
LMBR1-211ENST00000444719 PAAF1Q9BRP4 392 aa24.48■■□□□ 1.51
LMBR1-211ENST00000444719 TCHPQ9BT92 498 aa24.48■■□□□ 1.51
LMBR1-211ENST00000444719 CDT1Q9H211 546 aa24.48■■□□□ 1.51
LMBR1-211ENST00000444719 TFIP11Q9UBB9 837 aaKnown RBP24.48■■□□□ 1.51
LMBR1-211ENST00000444719 IRAK3Q9Y616 596 aa24.48■■□□□ 1.51
LMBR1-211ENST00000444719 CITO14578 2027 aa24.47■■□□□ 1.51
LMBR1-211ENST00000444719 ZMYM2Q9UBW7 1377 aa24.47■■□□□ 1.51
LMBR1-211ENST00000444719 CASTOR2A6NHX0 329 aa24.47■■□□□ 1.51
LMBR1-211ENST00000444719 SOD2P04179 222 aa24.47■■□□□ 1.51
LMBR1-211ENST00000444719 HARSP12081 509 aaKnown RBP24.47■■□□□ 1.51
LMBR1-211ENST00000444719 STRN3Q13033 797 aa24.47■■□□□ 1.51
LMBR1-211ENST00000444719 GIT2Q14161 759 aa24.47■■□□□ 1.51
LMBR1-211ENST00000444719 SLC39A14Q15043 492 aa24.47■■□□□ 1.51
LMBR1-211ENST00000444719 SYCE2Q6PIF2 218 aa24.47■■□□□ 1.51
LMBR1-211ENST00000444719 ADHFE1Q8IWW8 467 aa24.47■■□□□ 1.51
LMBR1-211ENST00000444719 LARP4BQ92615 738 aaKnown RBP24.47■■□□□ 1.51
LMBR1-211ENST00000444719 ZBTB45Q96K62 511 aaPredicted RBP24.47■■□□□ 1.51
LMBR1-211ENST00000444719 ZHX3Q9H4I2 956 aa24.47■■□□□ 1.51
LMBR1-211ENST00000444719 PTPRHQ9HD43 1115 aa24.47■■□□□ 1.51
LMBR1-211ENST00000444719 MRPL17Q9NRX2 175 aaKnown RBP24.47■■□□□ 1.51
LMBR1-211ENST00000444719 LARSQ9P2J5 1176 aaKnown RBP24.47■■□□□ 1.51
LMBR1-211ENST00000444719 PRKAG3Q9UGI9 489 aa24.47■■□□□ 1.51
LMBR1-211ENST00000444719 KCNG1Q9UIX4 513 aa24.47■■□□□ 1.51
LMBR1-211ENST00000444719 FAM13AO94988 1023 aa24.46■■□□□ 1.51
LMBR1-211ENST00000444719 MAPTP10636 758 aaKnown RBP24.46■■□□□ 1.51
LMBR1-211ENST00000444719 DDIT3P35638 169 aa24.46■■□□□ 1.51
LMBR1-211ENST00000444719 TUSC3Q13454 348 aa24.46■■□□□ 1.51
LMBR1-211ENST00000444719 FOXD4L6Q3SYB3 417 aaPredicted RBP24.46■■□□□ 1.51
LMBR1-211ENST00000444719 GLRA4Q5JXX5 417 aa24.46■■□□□ 1.51
LMBR1-211ENST00000444719 FOXD4L3Q6VB84 417 aaPredicted RBP24.46■■□□□ 1.51
LMBR1-211ENST00000444719 MYCT1Q8N699 235 aa24.46■■□□□ 1.51
LMBR1-211ENST00000444719 HASPINQ8TF76 798 aa24.46■■□□□ 1.51
LMBR1-211ENST00000444719 CASP10Q92851 521 aa24.46■■□□□ 1.51
LMBR1-211ENST00000444719 PANK2Q9BZ23 570 aa24.46■■□□□ 1.51
LMBR1-211ENST00000444719 STK39Q9UEW8 545 aa24.46■■□□□ 1.51
LMBR1-211ENST00000444719 CCDC39Q9UFE4 941 aa24.46■■□□□ 1.51
LMBR1-211ENST00000444719 ODF2LQ9ULJ1 636 aa24.46■■□□□ 1.51
LMBR1-211ENST00000444719 TADA2AO75478 443 aa24.45■■□□□ 1.5
LMBR1-211ENST00000444719 URODP06132 367 aa24.45■■□□□ 1.5
LMBR1-211ENST00000444719 EPCAMP16422 314 aa24.45■■□□□ 1.5
LMBR1-211ENST00000444719 KLRC2P26717 231 aa24.45■■□□□ 1.5
LMBR1-211ENST00000444719 STK38Q15208 465 aa24.45■■□□□ 1.5
LMBR1-211ENST00000444719 B3GALT6Q96L58 329 aa24.45■■□□□ 1.5
LMBR1-211ENST00000444719 KLHL5Q96PQ7 755 aa24.45■■□□□ 1.5
LMBR1-211ENST00000444719 HERC2P3Q9BVR0 1158 aa24.45■■□□□ 1.5
LMBR1-211ENST00000444719 EMILIN2Q9BXX0 1053 aa24.45■■□□□ 1.5
LMBR1-211ENST00000444719 GPR62Q9BZJ7 368 aa24.45■■□□□ 1.5
LMBR1-211ENST00000444719 S1PR5Q9H228 398 aa24.45■■□□□ 1.5
LMBR1-211ENST00000444719 EPHX3Q9H6B9 360 aa24.45■■□□□ 1.5
LMBR1-211ENST00000444719 ADAM28Q9UKQ2 775 aa24.45■■□□□ 1.5
LMBR1-211ENST00000444719 LILRB3O75022 631 aa24.44■■□□□ 1.5
LMBR1-211ENST00000444719 CNPP09543 421 aaKnown RBP24.44■■□□□ 1.5
LMBR1-211ENST00000444719 GRM5P41594 1212 aa24.44■■□□□ 1.5
LMBR1-211ENST00000444719 HSP90AA2PQ14568 343 aaPredicted RBP24.44■■□□□ 1.5
LMBR1-211ENST00000444719 RRAGBQ5VZM2 374 aa24.44■■□□□ 1.5
LMBR1-211ENST00000444719 KIAA1841Q6NSI8 718 aa24.44■■□□□ 1.5
LMBR1-211ENST00000444719 KANK3Q6NY19 840 aa24.44■■□□□ 1.5
LMBR1-211ENST00000444719 FUT10Q6P4F1 479 aa24.44■■□□□ 1.5
LMBR1-211ENST00000444719 MPZL3Q6UWV2 235 aa24.44■■□□□ 1.5
LMBR1-211ENST00000444719 HAUS6Q7Z4H7 955 aa24.44■■□□□ 1.5
LMBR1-211ENST00000444719 C12orf76Q8N812 135 aaPredicted RBP24.44■■□□□ 1.5
LMBR1-211ENST00000444719 KRI1Q8N9T8 703 aaKnown RBP24.44■■□□□ 1.5
LMBR1-211ENST00000444719 SLC22A17Q8WUG5 538 aa24.44■■□□□ 1.5
LMBR1-211ENST00000444719 CCDC94Q9BW85 323 aaPredicted RBP24.44■■□□□ 1.5
LMBR1-211ENST00000444719 ANKFY1Q9P2R3 1169 aa24.44■■□□□ 1.5
LMBR1-211ENST00000444719 CDH22Q9UJ99 828 aa24.44■■□□□ 1.5
LMBR1-211ENST00000444719 PLXNA3P51805 1871 aa24.44■■□□□ 1.5
LMBR1-211ENST00000444719 ABLIM1O14639 778 aa24.43■■□□□ 1.5
LMBR1-211ENST00000444719 EFEMP2O95967 443 aa24.43■■□□□ 1.5
LMBR1-211ENST00000444719 PROZP22891 400 aa24.43■■□□□ 1.5
LMBR1-211ENST00000444719 TXLNAP40222 546 aa24.43■■□□□ 1.5
LMBR1-211ENST00000444719 NASPP49321 788 aaPredicted RBP24.43■■□□□ 1.5
LMBR1-211ENST00000444719 GLUD2P49448 558 aa24.43■■□□□ 1.5
LMBR1-211ENST00000444719 YARSP54577 528 aaKnown RBP24.43■■□□□ 1.5
LMBR1-211ENST00000444719 NCKAP1LP55160 1127 aa24.43■■□□□ 1.5
LMBR1-211ENST00000444719 NAB2Q15742 525 aa24.43■■□□□ 1.5
LMBR1-211ENST00000444719 RNF168Q8IYW5 571 aaPredicted RBP24.43■■□□□ 1.5
LMBR1-211ENST00000444719 BICD1Q96G01 975 aa24.43■■□□□ 1.5
LMBR1-211ENST00000444719 ZNF396Q96N95 335 aaPredicted RBP24.43■■□□□ 1.5
LMBR1-211ENST00000444719 PARVGQ9HBI0 331 aa24.43■■□□□ 1.5
LMBR1-211ENST00000444719 C19orf67A6NJJ6 358 aa24.42■■□□□ 1.5
LMBR1-211ENST00000444719 TBCAO75347 108 aaKnown RBP24.42■■□□□ 1.5
LMBR1-211ENST00000444719 MCF2P10911 925 aa24.42■■□□□ 1.5
LMBR1-211ENST00000444719 HOXB8P17481 243 aaPredicted RBP24.42■■□□□ 1.5
LMBR1-211ENST00000444719 MATR3P43243 847 aaKnown RBP eCLIP24.42■■□□□ 1.52e-6■■■■□ 20.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms