RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 FOXD4L1Q9NU39 408 aa22.07■■□□□ 1.12
LRCH3-208ENST00000443727 KCND2Q9NZV8 630 aa22.07■■□□□ 1.12
LRCH3-208ENST00000443727 MUTYHQ9UIF7 546 aa22.07■■□□□ 1.12
LRCH3-208ENST00000443727 ADAM28Q9UKQ2 775 aa22.07■■□□□ 1.12
LRCH3-208ENST00000443727 TNFSF13BQ9Y275 285 aa22.07■■□□□ 1.12
LRCH3-208ENST00000443727 CASTOR2A6NHX0 329 aa22.06■■□□□ 1.12
LRCH3-208ENST00000443727 LOC730098B7Z3J9 87 aa22.06■■□□□ 1.12
LRCH3-208ENST00000443727 SLC16A4O15374 487 aa22.06■■□□□ 1.12
LRCH3-208ENST00000443727 GPR37L1O60883 481 aa22.06■■□□□ 1.12
LRCH3-208ENST00000443727 LONP1P36776 959 aaKnown RBP22.06■■□□□ 1.12
LRCH3-208ENST00000443727 SLC12A3P55017 1021 aa22.06■■□□□ 1.12
LRCH3-208ENST00000443727 STRN3Q13033 797 aa22.06■■□□□ 1.12
LRCH3-208ENST00000443727 MAPK7Q13164 816 aa22.06■■□□□ 1.12
LRCH3-208ENST00000443727 HSP90AA2PQ14568 343 aaPredicted RBP22.06■■□□□ 1.12
LRCH3-208ENST00000443727 ZNF568Q3ZCX4 644 aa22.06■■□□□ 1.12
LRCH3-208ENST00000443727 INTS4Q96HW7 963 aaKnown RBP22.06■■□□□ 1.12
LRCH3-208ENST00000443727 RIPOR3Q96MK2 946 aa22.06■■□□□ 1.12
LRCH3-208ENST00000443727 NECTIN4Q96NY8 510 aa22.06■■□□□ 1.12
LRCH3-208ENST00000443727 TSHZ2Q9NRE2 1034 aa22.06■■□□□ 1.12
LRCH3-208ENST00000443727 ARHGAP28Q9P2N2 729 aa22.06■■□□□ 1.12
LRCH3-208ENST00000443727 C5orf42Q9H799 3197 aa22.06■■□□□ 1.12
LRCH3-208ENST00000443727 K7ELQ4 463 aaPredicted RBP22.05■■□□□ 1.12
LRCH3-208ENST00000443727 LILRB3O75022 631 aa22.05■■□□□ 1.12
LRCH3-208ENST00000443727 ADH1AP07327 375 aa22.05■■□□□ 1.12
LRCH3-208ENST00000443727 PLS3P13797 630 aa22.05■■□□□ 1.12
LRCH3-208ENST00000443727 SYT1P21579 422 aa22.05■■□□□ 1.12
LRCH3-208ENST00000443727 SP100P23497 879 aaPredicted RBP22.05■■□□□ 1.12
LRCH3-208ENST00000443727 MTHFRP42898 656 aa22.05■■□□□ 1.12
LRCH3-208ENST00000443727 YARSP54577 528 aaKnown RBP22.05■■□□□ 1.12
LRCH3-208ENST00000443727 DHX8Q14562 1220 aaKnown RBP22.05■■□□□ 1.12
LRCH3-208ENST00000443727 FUT10Q6P4F1 479 aa22.05■■□□□ 1.12
LRCH3-208ENST00000443727 ZBTB33Q86T24 672 aa22.05■■□□□ 1.12
LRCH3-208ENST00000443727 FBXL18Q96ME1 805 aa22.05■■□□□ 1.12
LRCH3-208ENST00000443727 ACO2Q99798 780 aaKnown RBP22.05■■□□□ 1.12
LRCH3-208ENST00000443727 CCDC94Q9BW85 323 aaPredicted RBP22.05■■□□□ 1.12
LRCH3-208ENST00000443727 TARS2Q9BW92 718 aaKnown RBP22.05■■□□□ 1.12
LRCH3-208ENST00000443727 CACNG4Q9UBN1 327 aa22.05■■□□□ 1.12
LRCH3-208ENST00000443727 TDRD15B5MCY1 1934 aaKnown RBP22.04■■□□□ 1.12
LRCH3-208ENST00000443727 PTGESO14684 152 aa22.04■■□□□ 1.12
LRCH3-208ENST00000443727 CLCN4P51793 760 aa22.04■■□□□ 1.12
LRCH3-208ENST00000443727 USP41Q3LFD5 358 aa22.04■■□□□ 1.12
LRCH3-208ENST00000443727 ATAT1Q5SQI0 421 aa22.04■■□□□ 1.12
LRCH3-208ENST00000443727 KIAA0319Q5VV43 1072 aa22.04■■□□□ 1.12
LRCH3-208ENST00000443727 ELMSAN1Q6PJG2 1045 aa22.04■■□□□ 1.12
LRCH3-208ENST00000443727 GPBP1Q86WP2 473 aa22.04■■□□□ 1.12
LRCH3-208ENST00000443727 SPIRE2Q8WWL2 714 aa22.04■■□□□ 1.12
LRCH3-208ENST00000443727 B3GALT6Q96L58 329 aa22.04■■□□□ 1.12
LRCH3-208ENST00000443727 GPR62Q9BZJ7 368 aa22.04■■□□□ 1.12
LRCH3-208ENST00000443727 CDH22Q9UJ99 828 aa22.04■■□□□ 1.12
LRCH3-208ENST00000443727 NR2E1Q9Y466 385 aa22.04■■□□□ 1.12
LRCH3-208ENST00000443727 SF3B1O75533 1304 aaKnown RBP eCLIP22.04■■□□□ 1.122e-6■■■■■ 100.5
LRCH3-208ENST00000443727 NPHP3-ACAD11A0A0J9YXS1 232 aa22.03■■□□□ 1.12
LRCH3-208ENST00000443727 KRT18P05783 430 aaKnown RBP22.03■■□□□ 1.12
LRCH3-208ENST00000443727 WEE2P0C1S8 567 aa22.03■■□□□ 1.12
LRCH3-208ENST00000443727 OSTNP61366 133 aa22.03■■□□□ 1.12
LRCH3-208ENST00000443727 DSG1Q02413 1049 aa22.03■■□□□ 1.12
LRCH3-208ENST00000443727 CACNB1Q02641 598 aaPredicted RBP22.03■■□□□ 1.12
LRCH3-208ENST00000443727 HERC4Q5GLZ8 1057 aaPredicted RBP22.03■■□□□ 1.12
LRCH3-208ENST00000443727 KANK3Q6NY19 840 aa22.03■■□□□ 1.12
LRCH3-208ENST00000443727 TMC5Q6UXY8 1006 aa22.03■■□□□ 1.12
LRCH3-208ENST00000443727 HASPINQ8TF76 798 aa22.03■■□□□ 1.12
LRCH3-208ENST00000443727 PAAF1Q9BRP4 392 aa22.03■■□□□ 1.12
LRCH3-208ENST00000443727 NTPCRQ9BSD7 190 aaKnown RBP22.03■■□□□ 1.12
LRCH3-208ENST00000443727 CDT1Q9H211 546 aa22.03■■□□□ 1.12
LRCH3-208ENST00000443727 SFXN1Q9H9B4 322 aa22.03■■□□□ 1.12
LRCH3-208ENST00000443727 C11orf16Q9NQ32 467 aa22.03■■□□□ 1.12
LRCH3-208ENST00000443727 TOPORSQ9NS56 1045 aaPredicted RBP22.03■■□□□ 1.12
LRCH3-208ENST00000443727 LARSQ9P2J5 1176 aaKnown RBP22.03■■□□□ 1.12
LRCH3-208ENST00000443727 CLIC4Q9Y696 253 aa22.03■■□□□ 1.12
LRCH3-208ENST00000443727 TEX28O15482 410 aa22.02■■□□□ 1.12
LRCH3-208ENST00000443727 HARSP12081 509 aaKnown RBP22.02■■□□□ 1.12
LRCH3-208ENST00000443727 PLCG1P19174 1290 aa22.02■■□□□ 1.12
LRCH3-208ENST00000443727 CEBPZQ03701 1054 aaKnown RBP22.02■■□□□ 1.12
LRCH3-208ENST00000443727 GRIN1Q05586 938 aa22.02■■□□□ 1.12
LRCH3-208ENST00000443727 KARSQ15046 597 aaKnown RBP22.02■■□□□ 1.12
LRCH3-208ENST00000443727 GLRA4Q5JXX5 417 aa22.02■■□□□ 1.12
LRCH3-208ENST00000443727 TAS1R3Q7RTX0 852 aa22.02■■□□□ 1.12
LRCH3-208ENST00000443727 RNF168Q8IYW5 571 aaPredicted RBP22.02■■□□□ 1.12
LRCH3-208ENST00000443727 RIN2Q8WYP3 895 aaPredicted RBP22.02■■□□□ 1.12
LRCH3-208ENST00000443727 CXCL16Q9H2A7 254 aa22.02■■□□□ 1.12
LRCH3-208ENST00000443727 CHST7Q9NS84 486 aa22.02■■□□□ 1.12
LRCH3-208ENST00000443727 DPP7Q9UHL4 492 aa22.02■■□□□ 1.12
LRCH3-208ENST00000443727 H0YCG3 227 aa22.01■■□□□ 1.11
LRCH3-208ENST00000443727 KIF4AO95239 1232 aa22.01■■□□□ 1.11
LRCH3-208ENST00000443727 EFEMP2O95967 443 aa22.01■■□□□ 1.11
LRCH3-208ENST00000443727 GLUD1P00367 558 aa22.01■■□□□ 1.11
LRCH3-208ENST00000443727 MCF2P10911 925 aa22.01■■□□□ 1.11
LRCH3-208ENST00000443727 MARCKSP29966 332 aaPredicted RBP22.01■■□□□ 1.11
LRCH3-208ENST00000443727 GRM5P41594 1212 aa22.01■■□□□ 1.11
LRCH3-208ENST00000443727 MATR3P43243 847 aaKnown RBP eCLIP22.01■■□□□ 1.11
LRCH3-208ENST00000443727 CREMQ03060 361 aa22.01■■□□□ 1.11
LRCH3-208ENST00000443727 RESTQ13127 1097 aa22.01■■□□□ 1.11
LRCH3-208ENST00000443727 ARSHQ5FYA8 562 aa22.01■■□□□ 1.11
LRCH3-208ENST00000443727 MPZL3Q6UWV2 235 aa22.01■■□□□ 1.11
LRCH3-208ENST00000443727 TMEM161BQ8NDZ6 487 aa22.01■■□□□ 1.11
LRCH3-208ENST00000443727 POMKQ9H5K3 350 aa22.01■■□□□ 1.11
LRCH3-208ENST00000443727 RXFP1Q9HBX9 757 aa22.01■■□□□ 1.11
LRCH3-208ENST00000443727 PTPRHQ9HD43 1115 aa22.01■■□□□ 1.11
LRCH3-208ENST00000443727 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.01■■□□□ 1.11
LRCH3-208ENST00000443727 ANKFY1Q9P2R3 1169 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms