RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 CDT1Q9H211 546 aa23.13■■□□□ 1.29
CDKN3-204ENST00000442975 ZHX3Q9H4I2 956 aa23.13■■□□□ 1.29
CDKN3-204ENST00000442975 CD320Q9NPF0 282 aa23.13■■□□□ 1.29
CDKN3-204ENST00000442975 BLOC1S4Q9NUP1 217 aa23.13■■□□□ 1.29
CDKN3-204ENST00000442975 ANKFY1Q9P2R3 1169 aa23.13■■□□□ 1.29
CDKN3-204ENST00000442975 USP15Q9Y4E8 981 aaPredicted RBP23.13■■□□□ 1.29
CDKN3-204ENST00000442975 SRPRBQ9Y5M8 271 aaKnown RBP23.13■■□□□ 1.29
CDKN3-204ENST00000442975 TBCAO75347 108 aaKnown RBP23.12■■□□□ 1.29
CDKN3-204ENST00000442975 FAM13AO94988 1023 aa23.12■■□□□ 1.29
CDKN3-204ENST00000442975 OSTNP61366 133 aa23.12■■□□□ 1.29
CDKN3-204ENST00000442975 GIT2Q14161 759 aa23.12■■□□□ 1.29
CDKN3-204ENST00000442975 ANKRD54Q6NXT1 300 aa23.12■■□□□ 1.29
CDKN3-204ENST00000442975 ADHFE1Q8IWW8 467 aa23.12■■□□□ 1.29
CDKN3-204ENST00000442975 CEP120Q8N960 986 aa23.12■■□□□ 1.29
CDKN3-204ENST00000442975 TMEM161BQ8NDZ6 487 aa23.12■■□□□ 1.29
CDKN3-204ENST00000442975 LARP4BQ92615 738 aaKnown RBP23.12■■□□□ 1.29
CDKN3-204ENST00000442975 HERC2P3Q9BVR0 1158 aa23.12■■□□□ 1.29
CDKN3-204ENST00000442975 COLEC11Q9BWP8 271 aa23.12■■□□□ 1.29
CDKN3-204ENST00000442975 LARSQ9P2J5 1176 aaKnown RBP23.12■■□□□ 1.29
CDKN3-204ENST00000442975 PRKAG3Q9UGI9 489 aa23.12■■□□□ 1.29
CDKN3-204ENST00000442975 ODF2LQ9ULJ1 636 aa23.12■■□□□ 1.29
CDKN3-204ENST00000442975 PTGESO14684 152 aa23.11■■□□□ 1.29
CDKN3-204ENST00000442975 SOD2P04179 222 aa23.11■■□□□ 1.29
CDKN3-204ENST00000442975 MAPTP10636 758 aaKnown RBP23.11■■□□□ 1.29
CDKN3-204ENST00000442975 TUSC3Q13454 348 aa23.11■■□□□ 1.29
CDKN3-204ENST00000442975 STK38Q15208 465 aa23.11■■□□□ 1.29
CDKN3-204ENST00000442975 GLRA4Q5JXX5 417 aa23.11■■□□□ 1.29
CDKN3-204ENST00000442975 POP1Q99575 1024 aaKnown RBP23.11■■□□□ 1.29
CDKN3-204ENST00000442975 EMILIN2Q9BXX0 1053 aa23.11■■□□□ 1.29
CDKN3-204ENST00000442975 CCSER1Q9C0I3 900 aa23.11■■□□□ 1.29
CDKN3-204ENST00000442975 CXCL16Q9H2A7 254 aa23.11■■□□□ 1.29
CDKN3-204ENST00000442975 MRPL17Q9NRX2 175 aaKnown RBP23.11■■□□□ 1.29
CDKN3-204ENST00000442975 CCDC39Q9UFE4 941 aa23.11■■□□□ 1.29
CDKN3-204ENST00000442975 KCNG1Q9UIX4 513 aa23.11■■□□□ 1.29
CDKN3-204ENST00000442975 NCOR1O75376 2440 aa23.1■■□□□ 1.29
CDKN3-204ENST00000442975 K7ENM7 598 aa23.1■■□□□ 1.29
CDKN3-204ENST00000442975 THP07101 528 aa23.1■■□□□ 1.29
CDKN3-204ENST00000442975 YARSP54577 528 aaKnown RBP23.1■■□□□ 1.29
CDKN3-204ENST00000442975 KCNC3Q14003 757 aa23.1■■□□□ 1.29
CDKN3-204ENST00000442975 HSP90AA2PQ14568 343 aaPredicted RBP23.1■■□□□ 1.29
CDKN3-204ENST00000442975 KIAA1841Q6NSI8 718 aa23.1■■□□□ 1.29
CDKN3-204ENST00000442975 MPZL3Q6UWV2 235 aa23.1■■□□□ 1.29
CDKN3-204ENST00000442975 MYCT1Q8N699 235 aa23.1■■□□□ 1.29
CDKN3-204ENST00000442975 KRI1Q8N9T8 703 aaKnown RBP23.1■■□□□ 1.29
CDKN3-204ENST00000442975 HASPINQ8TF76 798 aa23.1■■□□□ 1.29
CDKN3-204ENST00000442975 BICD1Q96G01 975 aa23.1■■□□□ 1.29
CDKN3-204ENST00000442975 PAAF1Q9BRP4 392 aa23.1■■□□□ 1.29
CDKN3-204ENST00000442975 CCDC94Q9BW85 323 aaPredicted RBP23.1■■□□□ 1.29
CDKN3-204ENST00000442975 PARVGQ9HBI0 331 aa23.1■■□□□ 1.29
CDKN3-204ENST00000442975 IRAK3Q9Y616 596 aa23.1■■□□□ 1.29
CDKN3-204ENST00000442975 SPDYE4A6NLX3 237 aa23.09■■□□□ 1.29
CDKN3-204ENST00000442975 TADA2AO75478 443 aa23.09■■□□□ 1.29
CDKN3-204ENST00000442975 EPCAMP16422 314 aa23.09■■□□□ 1.29
CDKN3-204ENST00000442975 GRM5P41594 1212 aa23.09■■□□□ 1.29
CDKN3-204ENST00000442975 GLUD2P49448 558 aa23.09■■□□□ 1.29
CDKN3-204ENST00000442975 SLC39A14Q15043 492 aa23.09■■□□□ 1.29
CDKN3-204ENST00000442975 FOXD4L6Q3SYB3 417 aaPredicted RBP23.09■■□□□ 1.29
CDKN3-204ENST00000442975 FUT10Q6P4F1 479 aa23.09■■□□□ 1.29
CDKN3-204ENST00000442975 FOXD4L3Q6VB84 417 aaPredicted RBP23.09■■□□□ 1.29
CDKN3-204ENST00000442975 TMEM184AQ6ZMB5 413 aa23.09■■□□□ 1.29
CDKN3-204ENST00000442975 TAS1R1Q7RTX1 841 aa23.09■■□□□ 1.29
CDKN3-204ENST00000442975 B3GALT6Q96L58 329 aa23.09■■□□□ 1.29
CDKN3-204ENST00000442975 NTPCRQ9BSD7 190 aaKnown RBP23.09■■□□□ 1.29
CDKN3-204ENST00000442975 ADAM28Q9UKQ2 775 aa23.09■■□□□ 1.29
CDKN3-204ENST00000442975 H0YCG3 227 aa23.08■■□□□ 1.29
CDKN3-204ENST00000442975 KIF4AO95239 1232 aa23.08■■□□□ 1.29
CDKN3-204ENST00000442975 MCF2P10911 925 aa23.08■■□□□ 1.29
CDKN3-204ENST00000442975 KLRC2P26717 231 aa23.08■■□□□ 1.29
CDKN3-204ENST00000442975 MATR3P43243 847 aaKnown RBP eCLIP23.08■■□□□ 1.29
CDKN3-204ENST00000442975 NASPP49321 788 aaPredicted RBP23.08■■□□□ 1.29
CDKN3-204ENST00000442975 NCKAP1LP55160 1127 aa23.08■■□□□ 1.29
CDKN3-204ENST00000442975 NOLC1Q14978 699 aaKnown RBP eCLIP23.08■■□□□ 1.29
CDKN3-204ENST00000442975 TPRNQ4KMQ1 711 aa23.08■■□□□ 1.29
CDKN3-204ENST00000442975 RRAGBQ5VZM2 374 aa23.08■■□□□ 1.29
CDKN3-204ENST00000442975 SYCE2Q6PIF2 218 aa23.08■■□□□ 1.29
CDKN3-204ENST00000442975 KHSRPQ92945 711 aaKnown RBP eCLIP23.08■■□□□ 1.29
CDKN3-204ENST00000442975 ZNF396Q96N95 335 aaPredicted RBP23.08■■□□□ 1.29
CDKN3-204ENST00000442975 PTPRHQ9HD43 1115 aa23.08■■□□□ 1.29
CDKN3-204ENST00000442975 TOPORSQ9NS56 1045 aaPredicted RBP23.08■■□□□ 1.29
CDKN3-204ENST00000442975 STK17AQ9UEE5 414 aa23.08■■□□□ 1.29
CDKN3-204ENST00000442975 SF3B1O75533 1304 aaKnown RBP eCLIP23.08■■□□□ 1.28
CDKN3-204ENST00000442975 CNPP09543 421 aaKnown RBP23.07■■□□□ 1.28
CDKN3-204ENST00000442975 HOXB8P17481 243 aaPredicted RBP23.07■■□□□ 1.28
CDKN3-204ENST00000442975 PROZP22891 400 aa23.07■■□□□ 1.28
CDKN3-204ENST00000442975 HAUS6Q7Z4H7 955 aa23.07■■□□□ 1.28
CDKN3-204ENST00000442975 PPFIBP1Q86W92 1011 aa23.07■■□□□ 1.28
CDKN3-204ENST00000442975 KLHL5Q96PQ7 755 aa23.07■■□□□ 1.28
CDKN3-204ENST00000442975 DZANK1Q9NVP4 752 aa23.07■■□□□ 1.28
CDKN3-204ENST00000442975 TOM1L1O75674 476 aa23.06■■□□□ 1.28
CDKN3-204ENST00000442975 ZSCAN22P10073 491 aaPredicted RBP23.06■■□□□ 1.28
CDKN3-204ENST00000442975 DDIT3P35638 169 aa23.06■■□□□ 1.28
CDKN3-204ENST00000442975 STAT6P42226 847 aa23.06■■□□□ 1.28
CDKN3-204ENST00000442975 CBX2Q14781 532 aaPredicted RBP23.06■■□□□ 1.28
CDKN3-204ENST00000442975 RARS2Q5T160 578 aaKnown RBP23.06■■□□□ 1.28
CDKN3-204ENST00000442975 ZBTB45Q96K62 511 aaPredicted RBP23.06■■□□□ 1.28
CDKN3-204ENST00000442975 GPR62Q9BZJ7 368 aa23.06■■□□□ 1.28
CDKN3-204ENST00000442975 TFIP11Q9UBB9 837 aaKnown RBP23.06■■□□□ 1.28
CDKN3-204ENST00000442975 CDH22Q9UJ99 828 aa23.06■■□□□ 1.28
CDKN3-204ENST00000442975 SSX2IPQ9Y2D8 614 aa23.06■■□□□ 1.28
CDKN3-204ENST00000442975 ABLIM1O14639 778 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms