RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 FAM213AQ9BRX8 229 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 TCHPQ9BT92 498 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 UPF3AQ9H1J1 476 aaKnown RBP8.76□□□□□ -1.01
CCDC39-201ENST00000442201 FZD8Q9H461 694 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 ZNHIT6Q9NWK9 470 aaKnown RBP8.76□□□□□ -1.01
CCDC39-201ENST00000442201 A0A087WZ62 844 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 A0A0B4J269 797 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 EPHB6O15197 1021 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 CLDN3O15551 220 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 N4BP1O75113 896 aaKnown RBP8.76□□□□□ -1.01
CCDC39-201ENST00000442201 CDC42EP1Q00587 391 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 CETN1Q12798 172 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 SETDB1Q15047 1291 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 IFNLR1Q8IU57 520 aaPredicted RBP8.76□□□□□ -1.01
CCDC39-201ENST00000442201 TMTC1Q8IUR5 882 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 KIAA0319LQ8IZA0 1049 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 TMC2Q8TDI7 906 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 PXYLP1Q8TE99 480 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 EXOC4Q96A65 974 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 ZBTB45Q96K62 511 aaPredicted RBP8.76□□□□□ -1.01
CCDC39-201ENST00000442201 FDXACB1Q9BRP7 624 aaPredicted RBP8.76□□□□□ -1.01
CCDC39-201ENST00000442201 MTG1Q9BT17 334 aaPredicted RBP8.76□□□□□ -1.01
CCDC39-201ENST00000442201 MSTO1Q9BUK6 570 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 PLCB1Q9NQ66 1216 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 XPNPEP3Q9NQH7 507 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 PRMT7Q9NVM4 692 aaPredicted RBP8.76□□□□□ -1.01
CCDC39-201ENST00000442201 GCNT4Q9P109 453 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 MBLAC1A4D2B0 266 aaPredicted RBP8.75□□□□□ -1.01
CCDC39-201ENST00000442201 MYADML2A6NDP7 307 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 EDN1P05305 212 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 GNAT1P11488 350 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 FECHP22830 423 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 CCND3P30281 292 aaPredicted RBP8.75□□□□□ -1.01
CCDC39-201ENST00000442201 MYL7Q01449 175 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 PRPF4BQ13523 1007 aaKnown RBP8.75□□□□□ -1.01
CCDC39-201ENST00000442201 C7orf31Q8N865 590 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 PARD3BQ8TEW8 1205 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 ZNF296Q8WUU4 475 aaPredicted RBP8.75□□□□□ -1.01
CCDC39-201ENST00000442201 NLRP7Q8WX94 980 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 CCDC127Q96BQ5 260 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 MIEF2Q96C03 454 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 MFSD14AQ96MC6 490 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 ACO2Q99798 780 aaKnown RBP8.75□□□□□ -1.01
CCDC39-201ENST00000442201 IFT122Q9HBG6 1241 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 CEP72Q9P209 647 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 SMIM35A0A1B0GVV1 85 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 EIF3CLB5ME19 914 aaKnown RBP8.75□□□□□ -1.01
CCDC39-201ENST00000442201 P4HA2O15460 535 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 CYP2C9P11712 490 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 SLC9A1P19634 815 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 PON1P27169 355 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 PRMT2P55345 433 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 NLRP11P59045 1033 aaKnown RBP8.75□□□□□ -1.01
CCDC39-201ENST00000442201 POLR2FP61218 127 aaKnown RBP8.75□□□□□ -1.01
CCDC39-201ENST00000442201 DLG4P78352 724 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 NKX3-2P78367 333 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 MBTD1Q05BQ5 628 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 ENPEPQ07075 957 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 CYP24A1Q07973 514 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 ADCY2Q08462 1091 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 CBWD6Q4V339 395 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 CBWD3Q5JTY5 395 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 CBWD5Q5RIA9 395 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 MAP3K21Q5TCX8 1036 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 CYP26C1Q6V0L0 522 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 ZNF410Q86VK4 478 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 PPP1R16BQ96T49 567 aa8.75□□□□□ -1.01
CCDC39-201ENST00000442201 EIF3CQ99613 913 aaKnown RBP8.75□□□□□ -1.01
CCDC39-201ENST00000442201 FAM49AQ9H0Q0 323 aaPredicted RBP8.75□□□□□ -1.01
CCDC39-201ENST00000442201 NUCKS1Q9H1E3 243 aaKnown RBP8.75□□□□□ -1.01
CCDC39-201ENST00000442201 ZSWIM8A7E2V4 1837 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 MGAMO43451 1857 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 C17orf102A2RUQ5 167 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 HARSP12081 509 aaKnown RBP8.74□□□□□ -1.01
CCDC39-201ENST00000442201 ACTN2P35609 894 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 ACOT2P49753 483 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 MXI1P50539 228 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 GPC3P51654 580 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 MCCD1P59942 119 aaPredicted RBP8.74□□□□□ -1.01
CCDC39-201ENST00000442201 PPP3CAQ08209 521 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 ATF7IP2Q5U623 682 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 CXCL17Q6UXB2 119 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 RRAGAQ7L523 313 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 PLEKHO2Q8TD55 490 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 PPP1R13LQ8WUF5 828 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 BEGAINQ9BUH8 593 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 MINDY3Q9H8M7 445 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 NLRC4Q9NPP4 1024 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 HDAC6Q9UBN7 1215 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 TTLL13PA6NNM8 815 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 ADAMTS4O75173 837 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 NOL4O94818 638 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 GCLMP48507 274 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 ADAM17P78536 824 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 FAM187BQ17R55 369 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 C1orf220Q5T0J3 134 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 TSHZ1Q6ZSZ6 1077 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 FNBP1Q96RU3 617 aa8.74□□□□□ -1.01
CCDC39-201ENST00000442201 PAIP2Q9BPZ3 127 aaKnown RBP8.74□□□□□ -1.01
CCDC39-201ENST00000442201 HAPLN2Q9GZV7 340 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms