RNA–Protein interactions for RNA: ENST00000440081.2

TNRC18-207, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 3

Gene TNRC18, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-207ENST00000440081 RABGGTAQ92696 567 aa12.35□□□□□ -0.43
TNRC18-207ENST00000440081 NAP1L4Q99733 375 aaKnown RBP12.35□□□□□ -0.43
TNRC18-207ENST00000440081 HINFPQ9BQA5 517 aa12.35□□□□□ -0.43
TNRC18-207ENST00000440081 LARP6Q9BRS8 491 aaKnown RBP12.35□□□□□ -0.43
TNRC18-207ENST00000440081 RPP25Q9BUL9 199 aaKnown RBP12.35□□□□□ -0.43
TNRC18-207ENST00000440081 PHF20Q9BVI0 1012 aa12.35□□□□□ -0.43
TNRC18-207ENST00000440081 FOXQ1Q9C009 403 aa12.35□□□□□ -0.43
TNRC18-207ENST00000440081 ZMYM2Q9UBW7 1377 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 POTEMA6NI47 508 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 B4GALT5O43286 388 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 LRRN2O75325 713 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 SLITRK3O94933 977 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 NPTXRO95502 500 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 ARL2P36404 184 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 STARD6P59095 220 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 GPC5P78333 572 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 HSP90AA2PQ14568 343 aaPredicted RBP12.34□□□□□ -0.43
TNRC18-207ENST00000440081 PUM1Q14671 1186 aaKnown RBP eCLIP12.34□□□□□ -0.43
TNRC18-207ENST00000440081 RTP2Q5QGT7 225 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 SLC27A1Q6PCB7 646 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 PRSS55Q6UWB4 352 aaPredicted RBP12.34□□□□□ -0.43
TNRC18-207ENST00000440081 PARM1Q6UWI2 310 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 PIK3AP1Q6ZUJ8 805 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 GRASPQ7Z6J2 395 aaPredicted RBP12.34□□□□□ -0.43
TNRC18-207ENST00000440081 CDR2LQ86X02 465 aaPredicted RBP12.34□□□□□ -0.43
TNRC18-207ENST00000440081 TPH2Q8IWU9 490 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 RUBCNQ92622 972 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 FGF14Q92915 247 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 SHDQ96IW2 340 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 NFKBIZQ9BYH8 718 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 KLK14Q9P0G3 267 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 CACNG4Q9UBN1 327 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 PARP2Q9UGN5 583 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 FBXW11Q9UKB1 542 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 CDH7Q9ULB5 785 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 CYP46A1Q9Y6A2 500 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 GPR179Q6PRD1 2367 aa12.34□□□□□ -0.43
TNRC18-207ENST00000440081 SF3B1O75533 1304 aaKnown RBP eCLIP12.34□□□□□ -0.43
TNRC18-207ENST00000440081 WDR87Q6ZQQ6 2873 aa12.33□□□□□ -0.44
TNRC18-207ENST00000440081 DNAH14Q0VDD8 3507 aa12.33□□□□□ -0.44
TNRC18-207ENST00000440081 A0A1B0GUA9 196 aa12.33□□□□□ -0.44
TNRC18-207ENST00000440081 DGAT1O75907 488 aa12.33□□□□□ -0.44
TNRC18-207ENST00000440081 BAG4O95429 457 aaKnown RBP12.33□□□□□ -0.44
TNRC18-207ENST00000440081 HNRNPA1P09651 372 aaKnown RBP eCLIP12.33□□□□□ -0.44
TNRC18-207ENST00000440081 GLRA2P23416 452 aa12.33□□□□□ -0.44
TNRC18-207ENST00000440081 NTHL1P78549 312 aa12.33□□□□□ -0.44
TNRC18-207ENST00000440081 LIN9Q5TKA1 542 aa12.33□□□□□ -0.44
TNRC18-207ENST00000440081 SLFN12Q8IYM2 578 aa12.33□□□□□ -0.44
TNRC18-207ENST00000440081 MAML2Q8IZL2 1156 aaPredicted RBP12.33□□□□□ -0.44
TNRC18-207ENST00000440081 DCLK2Q8N568 766 aa12.33□□□□□ -0.44
TNRC18-207ENST00000440081 OXER1Q8TDS5 423 aa12.33□□□□□ -0.44
TNRC18-207ENST00000440081 KIF2CQ99661 725 aa12.33□□□□□ -0.44
TNRC18-207ENST00000440081 EIF2AK1Q9BQI3 630 aaKnown RBP12.33□□□□□ -0.44
TNRC18-207ENST00000440081 PAAF1Q9BRP4 392 aa12.33□□□□□ -0.44
TNRC18-207ENST00000440081 GJB4Q9NTQ9 266 aa12.33□□□□□ -0.44
TNRC18-207ENST00000440081 ANKEF1Q9NU02 776 aa12.33□□□□□ -0.44
TNRC18-207ENST00000440081 NCOR2Q9Y618 2525 aa12.33□□□□□ -0.44
TNRC18-207ENST00000440081 DMXL1Q9Y485 3027 aa12.32□□□□□ -0.44
TNRC18-207ENST00000440081 PATJQ8NI35 1801 aa12.32□□□□□ -0.44
TNRC18-207ENST00000440081 COL4A3Q01955 1670 aa12.32□□□□□ -0.44
TNRC18-207ENST00000440081 KANSL1LA0AUZ9 987 aa12.32□□□□□ -0.44
TNRC18-207ENST00000440081 KINO60870 393 aaKnown RBP12.32□□□□□ -0.44
TNRC18-207ENST00000440081 CDKL5O76039 1030 aa12.32□□□□□ -0.44
TNRC18-207ENST00000440081 LYPLA2O95372 231 aa12.32□□□□□ -0.44
TNRC18-207ENST00000440081 C8AP07357 584 aa12.32□□□□□ -0.44
TNRC18-207ENST00000440081 XBP1P17861 261 aa12.32□□□□□ -0.44
TNRC18-207ENST00000440081 ANP32AP39687 249 aaKnown RBP12.32□□□□□ -0.44
TNRC18-207ENST00000440081 TUSC3Q13454 348 aa12.32□□□□□ -0.44
TNRC18-207ENST00000440081 SNW1Q13573 536 aaKnown RBP12.32□□□□□ -0.44
TNRC18-207ENST00000440081 MLF2Q15773 248 aaPredicted RBP12.32□□□□□ -0.44
TNRC18-207ENST00000440081 PSMD5Q16401 504 aa12.32□□□□□ -0.44
TNRC18-207ENST00000440081 EARS2Q5JPH6 523 aaKnown RBP12.32□□□□□ -0.44
TNRC18-207ENST00000440081 PPM1LQ5SGD2 360 aa12.32□□□□□ -0.44
TNRC18-207ENST00000440081 FAM171A1Q5VUB5 890 aa12.32□□□□□ -0.44
TNRC18-207ENST00000440081 MTSS1LQ765P7 747 aa12.32□□□□□ -0.44
TNRC18-207ENST00000440081 SUMF1Q8NBK3 374 aa12.32□□□□□ -0.44
TNRC18-207ENST00000440081 LNX1Q8TBB1 728 aaPredicted RBP12.32□□□□□ -0.44
TNRC18-207ENST00000440081 HASPINQ8TF76 798 aa12.32□□□□□ -0.44
TNRC18-207ENST00000440081 PIK3R5Q8WYR1 880 aa12.32□□□□□ -0.44
TNRC18-207ENST00000440081 FGF13Q92913 245 aa12.32□□□□□ -0.44
TNRC18-207ENST00000440081 CCDC43Q96MW1 224 aaKnown RBP12.32□□□□□ -0.44
TNRC18-207ENST00000440081 HSD17B14Q9BPX1 270 aa12.32□□□□□ -0.44
TNRC18-207ENST00000440081 CLSTN3Q9BQT9 956 aa12.32□□□□□ -0.44
TNRC18-207ENST00000440081 TTPALQ9BTX7 342 aa12.32□□□□□ -0.44
TNRC18-207ENST00000440081 DDX23Q9BUQ8 820 aaKnown RBP12.32□□□□□ -0.44
TNRC18-207ENST00000440081 POLR3FQ9H1D9 316 aaPredicted RBP12.32□□□□□ -0.44
TNRC18-207ENST00000440081 DLL3Q9NYJ7 618 aa12.32□□□□□ -0.44
TNRC18-207ENST00000440081 STK36Q9NRP7 1315 aa12.32□□□□□ -0.44
TNRC18-207ENST00000440081 VWA8A3KMH1 1905 aa12.31□□□□□ -0.44
TNRC18-207ENST00000440081 FAM205CA6NFA0 338 aa12.31□□□□□ -0.44
TNRC18-207ENST00000440081 CASTOR2A6NHX0 329 aa12.31□□□□□ -0.44
TNRC18-207ENST00000440081 CCL16O15467 120 aa12.31□□□□□ -0.44
TNRC18-207ENST00000440081 KIF4AO95239 1232 aa12.31□□□□□ -0.44
TNRC18-207ENST00000440081 HOXA9P31269 272 aa12.31□□□□□ -0.44
TNRC18-207ENST00000440081 RARRES1P49788 294 aa12.31□□□□□ -0.44
TNRC18-207ENST00000440081 PRKCQQ04759 706 aa12.31□□□□□ -0.44
TNRC18-207ENST00000440081 SCRN1Q12765 414 aa12.31□□□□□ -0.44
TNRC18-207ENST00000440081 ZNF528Q3MIS6 628 aa12.31□□□□□ -0.44
TNRC18-207ENST00000440081 CEP57Q86XR8 500 aa12.31□□□□□ -0.44
TNRC18-207ENST00000440081 ITFG1Q8TB96 612 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms