RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 PCIF1Q9H4Z3 704 aa13.81□□□□□ -0.2
SCLT1-202ENST00000439369 PLEKHA5Q9HAU0 1116 aa13.81□□□□□ -0.2
SCLT1-202ENST00000439369 UBN1Q9NPG3 1134 aa13.81□□□□□ -0.2
SCLT1-202ENST00000439369 SAMSN1Q9NSI8 373 aaKnown RBP13.81□□□□□ -0.2
SCLT1-202ENST00000439369 FAM105AQ9NUU6 356 aa13.81□□□□□ -0.2
SCLT1-202ENST00000439369 ARMCX3Q9UH62 379 aaPredicted RBP13.81□□□□□ -0.2
SCLT1-202ENST00000439369 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.81□□□□□ -0.2
SCLT1-202ENST00000439369 NR2E3Q9Y5X4 410 aa13.81□□□□□ -0.2
SCLT1-202ENST00000439369 ABHD14A-ACY1A0A1B0GW23 586 aa13.8□□□□□ -0.2
SCLT1-202ENST00000439369 LRRC10BA6NIK2 292 aa13.8□□□□□ -0.2
SCLT1-202ENST00000439369 C9IYK1 514 aa13.8□□□□□ -0.2
SCLT1-202ENST00000439369 STX10O60499 249 aa13.8□□□□□ -0.2
SCLT1-202ENST00000439369 BAIAP3O94812 1187 aa13.8□□□□□ -0.2
SCLT1-202ENST00000439369 EOMESO95936 686 aa13.8□□□□□ -0.2
SCLT1-202ENST00000439369 ADRB2P07550 413 aa13.8□□□□□ -0.2
SCLT1-202ENST00000439369 STAG3L1P0CL83 205 aa13.8□□□□□ -0.2
SCLT1-202ENST00000439369 CASP4P49662 377 aa13.8□□□□□ -0.2
SCLT1-202ENST00000439369 IKBKEQ14164 716 aa13.8□□□□□ -0.2
SCLT1-202ENST00000439369 PSMD6Q15008 389 aa13.8□□□□□ -0.2
SCLT1-202ENST00000439369 CCDC40Q4G0X9 1142 aa13.8□□□□□ -0.2
SCLT1-202ENST00000439369 TCP11X2Q5H9J9 407 aa13.8□□□□□ -0.2
SCLT1-202ENST00000439369 CRELD2Q6UXH1 353 aaPredicted RBP13.8□□□□□ -0.2
SCLT1-202ENST00000439369 TRIM59Q8IWR1 403 aa13.8□□□□□ -0.2
SCLT1-202ENST00000439369 SAAL1Q96ER3 474 aa13.8□□□□□ -0.2
SCLT1-202ENST00000439369 ACAP3Q96P50 834 aa13.8□□□□□ -0.2
SCLT1-202ENST00000439369 FAM213AQ9BRX8 229 aa13.8□□□□□ -0.2
SCLT1-202ENST00000439369 EIF2AQ9BY44 585 aaKnown RBP13.8□□□□□ -0.2
SCLT1-202ENST00000439369 ELAC1Q9H777 363 aaKnown RBP13.8□□□□□ -0.2
SCLT1-202ENST00000439369 IL23AQ9NPF7 189 aa13.8□□□□□ -0.2
SCLT1-202ENST00000439369 TOPORSQ9NS56 1045 aaPredicted RBP13.8□□□□□ -0.2
SCLT1-202ENST00000439369 LIMA1Q9UHB6 759 aaKnown RBP13.8□□□□□ -0.2
SCLT1-202ENST00000439369 IPPQ9Y573 584 aa13.8□□□□□ -0.2
SCLT1-202ENST00000439369 PCDHB2Q9Y5E7 798 aa13.8□□□□□ -0.2
SCLT1-202ENST00000439369 KCNJ18B7U540 433 aa13.79□□□□□ -0.2
SCLT1-202ENST00000439369 MGEA5O60502 916 aa13.79□□□□□ -0.2
SCLT1-202ENST00000439369 TPM2P07951 284 aa13.79□□□□□ -0.2
SCLT1-202ENST00000439369 HARSP12081 509 aaKnown RBP13.79□□□□□ -0.2
SCLT1-202ENST00000439369 ACTN1P12814 892 aa13.79□□□□□ -0.2
SCLT1-202ENST00000439369 CSF2RAP15509 400 aa13.79□□□□□ -0.2
SCLT1-202ENST00000439369 CDK11BP21127 795 aaKnown RBP13.79□□□□□ -0.2
SCLT1-202ENST00000439369 ITGB8P26012 769 aa13.79□□□□□ -0.2
SCLT1-202ENST00000439369 YARSP54577 528 aaKnown RBP13.79□□□□□ -0.2
SCLT1-202ENST00000439369 CLDN10P78369 228 aa13.79□□□□□ -0.2
SCLT1-202ENST00000439369 FPGSQ05932 587 aa13.79□□□□□ -0.2
SCLT1-202ENST00000439369 CYP24A1Q07973 514 aa13.79□□□□□ -0.2
SCLT1-202ENST00000439369 BFSP1Q12934 665 aa13.79□□□□□ -0.2
SCLT1-202ENST00000439369 KCNJ12Q14500 433 aa13.79□□□□□ -0.2
SCLT1-202ENST00000439369 CDR2LQ86X02 465 aaPredicted RBP13.79□□□□□ -0.2
SCLT1-202ENST00000439369 ECHDC2Q86YB7 292 aa13.79□□□□□ -0.2
SCLT1-202ENST00000439369 NT5DC4Q86YG4 428 aa13.79□□□□□ -0.2
SCLT1-202ENST00000439369 CBWD2Q8IUF1 395 aa13.79□□□□□ -0.2
SCLT1-202ENST00000439369 THNSL1Q8IYQ7 743 aa13.79□□□□□ -0.2
SCLT1-202ENST00000439369 RNF214Q8ND24 703 aa13.79□□□□□ -0.2
SCLT1-202ENST00000439369 ASB7Q9H672 318 aa13.79□□□□□ -0.2
SCLT1-202ENST00000439369 RPF1Q9H9Y2 349 aaKnown RBP13.79□□□□□ -0.2
SCLT1-202ENST00000439369 RBAKQ9NYW8 714 aaPredicted RBP13.79□□□□□ -0.2
SCLT1-202ENST00000439369 GIT1Q9Y2X7 761 aa13.79□□□□□ -0.2
SCLT1-202ENST00000439369 DERAQ9Y315 318 aa13.79□□□□□ -0.2
SCLT1-202ENST00000439369 TTC26A0AVF1 554 aa13.78□□□□□ -0.2
SCLT1-202ENST00000439369 FSD2A1L4K1 749 aa13.78□□□□□ -0.2
SCLT1-202ENST00000439369 GOLGA8IPA6NC78 632 aa13.78□□□□□ -0.2
SCLT1-202ENST00000439369 GOLGA8JA6NMD2 632 aa13.78□□□□□ -0.2
SCLT1-202ENST00000439369 ENPP3O14638 875 aa13.78□□□□□ -0.2
SCLT1-202ENST00000439369 INPPL1O15357 1258 aa13.78□□□□□ -0.2
SCLT1-202ENST00000439369 GTF2H1P32780 548 aa13.78□□□□□ -0.2
SCLT1-202ENST00000439369 MTIF2P46199 727 aaKnown RBP13.78□□□□□ -0.2
SCLT1-202ENST00000439369 ACOT2P49753 483 aa13.78□□□□□ -0.2
SCLT1-202ENST00000439369 VAMP7P51809 220 aa13.78□□□□□ -0.2
SCLT1-202ENST00000439369 AP3M2P53677 418 aa13.78□□□□□ -0.2
SCLT1-202ENST00000439369 ENOX2Q16206 610 aaKnown RBP13.78□□□□□ -0.2
SCLT1-202ENST00000439369 MAN2A1Q16706 1144 aa13.78□□□□□ -0.2
SCLT1-202ENST00000439369 PSRC1Q6PGN9 363 aaPredicted RBP13.78□□□□□ -0.2
SCLT1-202ENST00000439369 DEFB128Q7Z7B8 93 aa13.78□□□□□ -0.2
SCLT1-202ENST00000439369 ZNF598Q86UK7 904 aaKnown RBP13.78□□□□□ -0.2
SCLT1-202ENST00000439369 RTN4RL1Q86UN2 441 aaPredicted RBP13.78□□□□□ -0.2
SCLT1-202ENST00000439369 SMG8Q8ND04 991 aaKnown RBP13.78□□□□□ -0.2
SCLT1-202ENST00000439369 PARD3BQ8TEW8 1205 aa13.78□□□□□ -0.2
SCLT1-202ENST00000439369 LINC01599Q8WXQ3 324 aa13.78□□□□□ -0.2
SCLT1-202ENST00000439369 DPF3Q92784 378 aa13.78□□□□□ -0.2
SCLT1-202ENST00000439369 VWCEQ96DN2 955 aa13.78□□□□□ -0.2
SCLT1-202ENST00000439369 EEF2KMTQ96G04 330 aa13.78□□□□□ -0.2
SCLT1-202ENST00000439369 NXF3Q9H4D5 531 aaKnown RBP13.78□□□□□ -0.2
SCLT1-202ENST00000439369 TMEM161AQ9NX61 479 aa13.78□□□□□ -0.2
SCLT1-202ENST00000439369 LTBP2Q14767 1821 aa13.78□□□□□ -0.2
SCLT1-202ENST00000439369 GOLGA6L3A6NEY3 463 aa13.77□□□□□ -0.21
SCLT1-202ENST00000439369 PMM2O15305 246 aa13.77□□□□□ -0.21
SCLT1-202ENST00000439369 HOXA2O43364 376 aa13.77□□□□□ -0.21
SCLT1-202ENST00000439369 ITGA4P13612 1032 aa13.77□□□□□ -0.21
SCLT1-202ENST00000439369 GSE1Q14687 1217 aa13.77□□□□□ -0.21
SCLT1-202ENST00000439369 XKR4Q5GH76 650 aa13.77□□□□□ -0.21
SCLT1-202ENST00000439369 ZBTB41Q5SVQ8 909 aa13.77□□□□□ -0.21
SCLT1-202ENST00000439369 SARM1Q6SZW1 724 aa13.77□□□□□ -0.21
SCLT1-202ENST00000439369 WDR49Q8IV35 697 aa13.77□□□□□ -0.21
SCLT1-202ENST00000439369 CEP120Q8N960 986 aa13.77□□□□□ -0.21
SCLT1-202ENST00000439369 BADQ92934 168 aa13.77□□□□□ -0.21
SCLT1-202ENST00000439369 SNX27Q96L92 541 aa13.77□□□□□ -0.21
SCLT1-202ENST00000439369 FNBP1Q96RU3 617 aa13.77□□□□□ -0.21
SCLT1-202ENST00000439369 LBHD1Q9BQE6 289 aaPredicted RBP13.77□□□□□ -0.21
SCLT1-202ENST00000439369 TUBGCP2Q9BSJ2 902 aa13.77□□□□□ -0.21
SCLT1-202ENST00000439369 CNTN3Q9P232 1028 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms