RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 FBXO16Q8IX29 292 aaPredicted RBP13.09□□□□□ -0.31
TCOF1-205ENST00000439160 WNT8AQ9H1J5 351 aa13.09□□□□□ -0.31
TCOF1-205ENST00000439160 ADAM21Q9UKJ8 722 aa13.09□□□□□ -0.31
TCOF1-205ENST00000439160 STK38LQ9Y2H1 464 aa13.09□□□□□ -0.31
TCOF1-205ENST00000439160 TMEM150BA6NC51 233 aa13.08□□□□□ -0.31
TCOF1-205ENST00000439160 SPDYE16A6NNV3 312 aaPredicted RBP13.08□□□□□ -0.31
TCOF1-205ENST00000439160 IL9RQ01113 521 aa13.08□□□□□ -0.31
TCOF1-205ENST00000439160 MKRN4PQ13434 485 aaPredicted RBP13.08□□□□□ -0.31
TCOF1-205ENST00000439160 ARL13BQ3SXY8 428 aa13.08□□□□□ -0.31
TCOF1-205ENST00000439160 PCNX4Q63HM2 1172 aa13.08□□□□□ -0.31
TCOF1-205ENST00000439160 C4orf50Q6ZRC1 276 aa13.08□□□□□ -0.31
TCOF1-205ENST00000439160 NYAP1Q6ZVC0 841 aa13.08□□□□□ -0.31
TCOF1-205ENST00000439160 ZNF720Q7Z2F6 126 aa13.08□□□□□ -0.31
TCOF1-205ENST00000439160 BLOC1S4Q9NUP1 217 aa13.08□□□□□ -0.31
TCOF1-205ENST00000439160 RRP15Q9Y3B9 282 aaKnown RBP13.08□□□□□ -0.31
TCOF1-205ENST00000439160 EML1O00423 815 aa13.08□□□□□ -0.32
TCOF1-205ENST00000439160 SART1O43290 800 aaKnown RBP13.08□□□□□ -0.32
TCOF1-205ENST00000439160 VIL1P09327 827 aaKnown RBP13.08□□□□□ -0.32
TCOF1-205ENST00000439160 ANXA13P27216 316 aa13.08□□□□□ -0.32
TCOF1-205ENST00000439160 IFT88Q13099 833 aa13.08□□□□□ -0.32
TCOF1-205ENST00000439160 PARVAQ9NVD7 372 aa13.08□□□□□ -0.32
TCOF1-205ENST00000439160 SLC12A6Q9UHW9 1150 aa13.08□□□□□ -0.32
TCOF1-205ENST00000439160 LTN1O94822 1766 aa13.08□□□□□ -0.32
TCOF1-205ENST00000439160 CIB2O75838 187 aa13.08□□□□□ -0.32
TCOF1-205ENST00000439160 KRT3P12035 628 aa13.08□□□□□ -0.32
TCOF1-205ENST00000439160 PON1P27169 355 aa13.08□□□□□ -0.32
TCOF1-205ENST00000439160 CLCN3P51790 818 aa13.08□□□□□ -0.32
TCOF1-205ENST00000439160 NLRP11P59045 1033 aaKnown RBP13.08□□□□□ -0.32
TCOF1-205ENST00000439160 PPP4R1Q8TF05 950 aa13.08□□□□□ -0.32
TCOF1-205ENST00000439160 FAF2Q96CS3 445 aa13.08□□□□□ -0.32
TCOF1-205ENST00000439160 CFAP36Q96G28 342 aa13.08□□□□□ -0.32
TCOF1-205ENST00000439160 BAIAP2L1Q9UHR4 511 aa13.08□□□□□ -0.32
TCOF1-205ENST00000439160 MORC2Q9Y6X9 1032 aaPredicted RBP13.08□□□□□ -0.32
TCOF1-205ENST00000439160 GRID2IPA4D2P6 1211 aa13.08□□□□□ -0.32
TCOF1-205ENST00000439160 FOXN3O00409 490 aaPredicted RBP13.08□□□□□ -0.32
TCOF1-205ENST00000439160 FOXP2O15409 715 aa13.08□□□□□ -0.32
TCOF1-205ENST00000439160 CYP2C9P11712 490 aa13.08□□□□□ -0.32
TCOF1-205ENST00000439160 CHRNA3P32297 505 aa13.08□□□□□ -0.32
TCOF1-205ENST00000439160 RGS7P49802 495 aa13.08□□□□□ -0.32
TCOF1-205ENST00000439160 SGSM1Q2NKQ1 1148 aa13.08□□□□□ -0.32
TCOF1-205ENST00000439160 MAP1SQ66K74 1059 aaPredicted RBP13.08□□□□□ -0.32
TCOF1-205ENST00000439160 C18orf8Q96DM3 657 aa13.08□□□□□ -0.32
TCOF1-205ENST00000439160 AGO4Q9HCK5 861 aaKnown RBP13.08□□□□□ -0.32
TCOF1-205ENST00000439160 CAPN7Q9Y6W3 813 aa13.08□□□□□ -0.32
TCOF1-205ENST00000439160 ADM5C9JUS6 153 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 CREB3O43889 395 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 MT-ND3P03897 115 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 KRT7P08729 469 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 MYBL1P10243 752 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 EIF3BP55884 814 aaKnown RBP13.07□□□□□ -0.32
TCOF1-205ENST00000439160 FKBP1AP62942 108 aaKnown RBP13.07□□□□□ -0.32
TCOF1-205ENST00000439160 TMEM132DQ14C87 1099 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 PGM5Q15124 567 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 TEX2Q8IWB9 1127 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 CPSF3Q9UKF6 684 aaKnown RBP13.07□□□□□ -0.32
TCOF1-205ENST00000439160 PCDHB2Q9Y5E7 798 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 ATP8B3O60423 1300 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 EXTL3O43909 919 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 SLITRK3O94933 977 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 SUPT20HL2P0C7V6 817 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 CA4P22748 312 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 SHROOM1Q2M3G4 852 aaPredicted RBP13.07□□□□□ -0.32
TCOF1-205ENST00000439160 RAPH1Q70E73 1250 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 OTOP1Q7RTM1 612 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 AFAP1L2Q8N4X5 818 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 NOA1Q8NC60 698 aaKnown RBP13.07□□□□□ -0.32
TCOF1-205ENST00000439160 PRPF31Q8WWY3 499 aaKnown RBP13.07□□□□□ -0.32
TCOF1-205ENST00000439160 CCDC68Q9H2F9 335 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 TAF1DQ9H5J8 278 aaPredicted RBP13.07□□□□□ -0.32
TCOF1-205ENST00000439160 C17orf75Q9HAS0 396 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 MAP3K20Q9NYL2 800 aaKnown RBP13.07□□□□□ -0.32
TCOF1-205ENST00000439160 AFG3L2Q9Y4W6 797 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 WDR91A4D1P6 747 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 PDGFRBP09619 1106 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 DSG3P32926 999 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 RBP5P82980 135 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 PDCLQ13371 301 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 GNASQ5JWF2 1037 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 NT5DC1Q5TFE4 455 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 THEM5Q8N1Q8 247 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 GSDMBQ8TAX9 411 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 GDAP1Q8TB36 358 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 EXOC4Q96A65 974 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 POP1Q99575 1024 aaKnown RBP13.07□□□□□ -0.32
TCOF1-205ENST00000439160 LACRTQ9GZZ8 138 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 SPATC1LQ9H0A9 340 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 DLG5Q8TDM6 1919 aa13.07□□□□□ -0.32
TCOF1-205ENST00000439160 F5H423 210 aaPredicted RBP13.06□□□□□ -0.32
TCOF1-205ENST00000439160 WNT7AO00755 349 aa13.06□□□□□ -0.32
TCOF1-205ENST00000439160 CDH6P55285 790 aa13.06□□□□□ -0.32
TCOF1-205ENST00000439160 E2F4Q16254 413 aa13.06□□□□□ -0.32
TCOF1-205ENST00000439160 FKBP1CQ5VVH2 108 aa13.06□□□□□ -0.32
TCOF1-205ENST00000439160 TTC13Q8NBP0 860 aa13.06□□□□□ -0.32
TCOF1-205ENST00000439160 MKL1Q969V6 931 aa13.06□□□□□ -0.32
TCOF1-205ENST00000439160 MRIQ9BWK5 157 aa13.06□□□□□ -0.32
TCOF1-205ENST00000439160 TMEM117Q9H0C3 514 aa13.06□□□□□ -0.32
TCOF1-205ENST00000439160 DHX35Q9H5Z1 703 aaKnown RBP13.06□□□□□ -0.32
TCOF1-205ENST00000439160 NAGPAQ9UK23 515 aa13.06□□□□□ -0.32
TCOF1-205ENST00000439160 AKAP12Q02952 1782 aa13.06□□□□□ -0.32
TCOF1-205ENST00000439160 ZBTB22O15209 634 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms