RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 TTC23LQ6PF05 361 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 UNC13DQ70J99 1090 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 SPATA4Q8NEY3 305 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 CNDP1Q96KN2 507 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 ZNF577Q9BSK1 485 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 PDCD10Q9BUL8 212 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 KCNA2P16389 499 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 MXD4Q14582 209 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-209ENST00000437951 FASTKD1Q53R41 847 aaKnown RBP12.14□□□□□ -0.47
PTCH1-209ENST00000437951 NFRKBQ6P4R8 1299 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 C11orf88Q6PI97 169 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 SLC13A1Q9BZW2 595 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 ANTXR1Q9H6X2 564 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 C6orf203Q9P0P8 240 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-209ENST00000437951 COPG2Q9UBF2 871 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 SEPT9Q9UHD8 586 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-209ENST00000437951 BNC1Q01954 994 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 ZNF564Q8TBZ8 553 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-209ENST00000437951 SSH3Q8TE77 659 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 KRT35Q92764 455 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 NUP85Q9BW27 656 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 CNOT8Q9UFF9 292 aaKnown RBP12.14□□□□□ -0.47
PTCH1-209ENST00000437951 NQO1P15559 274 aaKnown RBP12.14□□□□□ -0.47
PTCH1-209ENST00000437951 STX5Q13190 355 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 COG2Q14746 738 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 NFATC2IPQ8NCF5 419 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 NSUN7Q8NE18 718 aaKnown RBP12.14□□□□□ -0.47
PTCH1-209ENST00000437951 PI4K2BQ8TCG2 481 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 TMA16Q96EY4 203 aaKnown RBP12.14□□□□□ -0.47
PTCH1-209ENST00000437951 PDLIM2Q96JY6 352 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 RPAP3Q9H6T3 665 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-209ENST00000437951 CTNNAL1Q9UBT7 734 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 A8MXQ7 604 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 CHRNA2Q15822 529 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 TTC39BQ5VTQ0 682 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-209ENST00000437951 AHI1Q8N157 1196 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 ERP27Q96DN0 273 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 DEPDC7Q96QD5 511 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 IMPAD1Q9NX62 359 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 ADAMTS1Q9UHI8 967 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 ENOPH1Q9UHY7 261 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 PHF2O75151 1096 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 ATP5BP06576 529 aaKnown RBP12.14□□□□□ -0.47
PTCH1-209ENST00000437951 ITGA1P56199 1179 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 PTPN12Q05209 780 aaKnown RBP12.14□□□□□ -0.47
PTCH1-209ENST00000437951 MMRN1Q13201 1228 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 NCAPHQ15003 741 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 ARMC4Q5T2S8 1044 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 PRPF39Q86UA1 669 aaKnown RBP12.14□□□□□ -0.47
PTCH1-209ENST00000437951 CCDC60Q8IWA6 550 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-209ENST00000437951 BTN2A2Q8WVV5 523 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 C1orf50Q9BV19 199 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 FRMD8Q9BZ67 464 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-209ENST00000437951 RPAP1Q9BWH6 1393 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-209ENST00000437951 CFAP99D6REC4 459 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 CYP4A11Q02928 519 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 COX10Q12887 443 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 C1DQ13901 141 aaKnown RBP12.13□□□□□ -0.47
PTCH1-209ENST00000437951 CYP4A22Q5TCH4 519 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 IZUMO3Q5VZ72 239 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 SUGP1Q8IWZ8 645 aaKnown RBP12.13□□□□□ -0.47
PTCH1-209ENST00000437951 LCORLQ8N3X6 602 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 ZWILCHQ9H900 591 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 BCL10O95999 233 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 PLA2G4AP47712 749 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 TRIQKQ629K1 86 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 POTEEQ6S8J3 1075 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 DPP8Q6V1X1 898 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-209ENST00000437951 KDM7AQ6ZMT4 941 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 SVOPQ8N4V2 548 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 CASS4Q9NQ75 786 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 C20orf96Q9NUD7 363 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-209ENST00000437951 RGS5O15539 181 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 ABCB1P08183 1280 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-209ENST00000437951 ZAP70P43403 619 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 TUBA4AP68366 448 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 CYP27A1Q02318 531 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 TGFBRAP1Q8WUH2 860 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 RFFLQ8WZ73 363 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 LRRC59Q96AG4 307 aaKnown RBP12.13□□□□□ -0.47
PTCH1-209ENST00000437951 DCPSQ96C86 337 aaKnown RBP12.13□□□□□ -0.47
PTCH1-209ENST00000437951 NRDE2Q9H7Z3 1164 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 EXOSC4Q9NPD3 245 aaKnown RBP12.13□□□□□ -0.47
PTCH1-209ENST00000437951 TRIM66O15016 1216 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 RCN1Q15293 331 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 PPP4R4Q6NUP7 873 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 BTN2A1Q7KYR7 527 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 ZBTB33Q86T24 672 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 FAM9CQ8IZT9 166 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 HEXIM2Q96MH2 286 aaKnown RBP12.13□□□□□ -0.47
PTCH1-209ENST00000437951 CEP44Q9C0F1 390 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 HMG20AQ9NP66 347 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 ERAP1Q9NZ08 941 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 POU5F1BQ06416 359 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 EDC4Q6P2E9 1401 aaKnown RBP12.13□□□□□ -0.47
PTCH1-209ENST00000437951 ZNF513Q8N8E2 541 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-209ENST00000437951 KLHL3Q9UH77 587 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 ADGRG1Q9Y653 693 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 REREQ9P2R6 1566 aa12.13□□□□□ -0.47
PTCH1-209ENST00000437951 PRPF3O43395 683 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms