RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 GUCY2CP25092 1073 aa12.03□□□□□ -0.48
HMGCL-204ENST00000436439 CLCN1P35523 988 aa12.03□□□□□ -0.48
HMGCL-204ENST00000436439 PPP1R2P41236 205 aa12.03□□□□□ -0.48
HMGCL-204ENST00000436439 RARRES1P49788 294 aa12.03□□□□□ -0.48
HMGCL-204ENST00000436439 NPEPPSP55786 919 aa12.03□□□□□ -0.48
HMGCL-204ENST00000436439 DHX8Q14562 1220 aaKnown RBP12.03□□□□□ -0.48
HMGCL-204ENST00000436439 CBX2Q14781 532 aaPredicted RBP12.03□□□□□ -0.48
HMGCL-204ENST00000436439 ANKRD54Q6NXT1 300 aa12.03□□□□□ -0.48
HMGCL-204ENST00000436439 SYCE2Q6PIF2 218 aa12.03□□□□□ -0.48
HMGCL-204ENST00000436439 TMEM184AQ6ZMB5 413 aa12.03□□□□□ -0.48
HMGCL-204ENST00000436439 C1orf186Q6ZWK4 172 aa12.03□□□□□ -0.48
HMGCL-204ENST00000436439 OTUD6AQ7L8S5 288 aa12.03□□□□□ -0.48
HMGCL-204ENST00000436439 TMC7Q7Z402 723 aa12.03□□□□□ -0.48
HMGCL-204ENST00000436439 RHPN2Q8IUC4 686 aa12.03□□□□□ -0.48
HMGCL-204ENST00000436439 EDAQ92838 391 aa12.03□□□□□ -0.48
HMGCL-204ENST00000436439 RPGRIP1Q96KN7 1286 aa12.03□□□□□ -0.48
HMGCL-204ENST00000436439 TIPINQ9BVW5 301 aa12.03□□□□□ -0.48
HMGCL-204ENST00000436439 GCOM2Q9BZD3 368 aaPredicted RBP12.03□□□□□ -0.48
HMGCL-204ENST00000436439 SPG21Q9NZD8 308 aa12.03□□□□□ -0.48
HMGCL-204ENST00000436439 SUCLA2Q9P2R7 463 aaPredicted RBP12.03□□□□□ -0.48
HMGCL-204ENST00000436439 ODF2LQ9ULJ1 636 aa12.03□□□□□ -0.48
HMGCL-204ENST00000436439 ARHGEF35A5YM69 484 aa12.02□□□□□ -0.49
HMGCL-204ENST00000436439 IKBKBO14920 756 aa12.02□□□□□ -0.49
HMGCL-204ENST00000436439 ZBTB39O15060 712 aa12.02□□□□□ -0.49
HMGCL-204ENST00000436439 ERCC5P28715 1186 aaPredicted RBP12.02□□□□□ -0.49
HMGCL-204ENST00000436439 PPM1AP35813 382 aa12.02□□□□□ -0.49
HMGCL-204ENST00000436439 PHKA2P46019 1235 aa12.02□□□□□ -0.49
HMGCL-204ENST00000436439 BCAR1P56945 870 aa12.02□□□□□ -0.49
HMGCL-204ENST00000436439 GIT2Q14161 759 aa12.02□□□□□ -0.49
HMGCL-204ENST00000436439 IQCB1Q15051 598 aa12.02□□□□□ -0.49
HMGCL-204ENST00000436439 DYMQ7RTS9 669 aa12.02□□□□□ -0.49
HMGCL-204ENST00000436439 TMEM173Q86WV6 379 aaPredicted RBP12.02□□□□□ -0.49
HMGCL-204ENST00000436439 CCDC65Q8IXS2 484 aa12.02□□□□□ -0.49
HMGCL-204ENST00000436439 FBXL18Q96ME1 805 aa12.02□□□□□ -0.49
HMGCL-204ENST00000436439 NLRP4Q96MN2 994 aa12.02□□□□□ -0.49
HMGCL-204ENST00000436439 IFT122Q9HBG6 1241 aa12.02□□□□□ -0.49
HMGCL-204ENST00000436439 CBX8Q9HC52 389 aa12.02□□□□□ -0.49
HMGCL-204ENST00000436439 NGRNQ9NPE2 291 aaKnown RBP12.02□□□□□ -0.49
HMGCL-204ENST00000436439 EXOC1Q9NV70 894 aa12.02□□□□□ -0.49
HMGCL-204ENST00000436439 PUF60Q9UHX1 559 aaKnown RBP12.02□□□□□ -0.49
HMGCL-204ENST00000436439 PIN4Q9Y237 131 aaKnown RBP12.02□□□□□ -0.49
HMGCL-204ENST00000436439 PPME1Q9Y570 386 aa12.02□□□□□ -0.49
HMGCL-204ENST00000436439 DENND4AQ7Z401 1863 aa12.01□□□□□ -0.49
HMGCL-204ENST00000436439 A0A087WWV3 80 aa12.01□□□□□ -0.49
HMGCL-204ENST00000436439 C2orf71A6NGG8 1288 aa12.01□□□□□ -0.49
HMGCL-204ENST00000436439 B4GALT3O60512 393 aa12.01□□□□□ -0.49
HMGCL-204ENST00000436439 ADCY5O95622 1261 aa12.01□□□□□ -0.49
HMGCL-204ENST00000436439 SSBP05455 408 aaKnown RBP eCLIP12.01□□□□□ -0.49
HMGCL-204ENST00000436439 SP100P23497 879 aaPredicted RBP12.01□□□□□ -0.49
HMGCL-204ENST00000436439 DNM2P50570 870 aa12.01□□□□□ -0.49
HMGCL-204ENST00000436439 ZNF131P52739 623 aa12.01□□□□□ -0.49
HMGCL-204ENST00000436439 KRT17Q04695 432 aa12.01□□□□□ -0.49
HMGCL-204ENST00000436439 ISM2Q6H9L7 571 aa12.01□□□□□ -0.49
HMGCL-204ENST00000436439 TWF2Q6IBS0 349 aaKnown RBP12.01□□□□□ -0.49
HMGCL-204ENST00000436439 ZNF410Q86VK4 478 aa12.01□□□□□ -0.49
HMGCL-204ENST00000436439 BCL7CQ8WUZ0 217 aaPredicted RBP12.01□□□□□ -0.49
HMGCL-204ENST00000436439 REEP2Q9BRK0 252 aa12.01□□□□□ -0.49
HMGCL-204ENST00000436439 RUSC1Q9BVN2 902 aa12.01□□□□□ -0.49
HMGCL-204ENST00000436439 TRAIPQ9BWF2 469 aa12.01□□□□□ -0.49
HMGCL-204ENST00000436439 NRDE2Q9H7Z3 1164 aa12.01□□□□□ -0.49
HMGCL-204ENST00000436439 RTN4Q9NQC3 1192 aaKnown RBP12.01□□□□□ -0.49
HMGCL-204ENST00000436439 CYP26B1Q9NR63 512 aa12.01□□□□□ -0.49
HMGCL-204ENST00000436439 CHST12Q9NRB3 414 aa12.01□□□□□ -0.49
HMGCL-204ENST00000436439 PANK4Q9NVE7 773 aa12.01□□□□□ -0.49
HMGCL-204ENST00000436439 SEL1LQ9UBV2 794 aa12.01□□□□□ -0.49
HMGCL-204ENST00000436439 HCFC2Q9Y5Z7 792 aa12.01□□□□□ -0.49
HMGCL-204ENST00000436439 TDRD15B5MCY1 1934 aaKnown RBP12.01□□□□□ -0.49
HMGCL-204ENST00000436439 C2orf16Q68DN1 1984 aa12□□□□□ -0.49
HMGCL-204ENST00000436439 SMTNL1A8MU46 457 aa12□□□□□ -0.49
HMGCL-204ENST00000436439 PPP1R3GB7ZBB8 358 aa12□□□□□ -0.49
HMGCL-204ENST00000436439 ZC3H11AO75152 810 aaKnown RBP eCLIP12□□□□□ -0.49
HMGCL-204ENST00000436439 PTMAP06454 111 aaKnown RBP12□□□□□ -0.49
HMGCL-204ENST00000436439 GAP43P17677 238 aa12□□□□□ -0.49
HMGCL-204ENST00000436439 SFPQP23246 707 aaKnown RBP eCLIP12□□□□□ -0.49
HMGCL-204ENST00000436439 MSNP26038 577 aaKnown RBP12□□□□□ -0.49
HMGCL-204ENST00000436439 ZXDAP98168 799 aa12□□□□□ -0.49
HMGCL-204ENST00000436439 CDC42EP1Q00587 391 aa12□□□□□ -0.49
HMGCL-204ENST00000436439 SMC1AQ14683 1233 aaKnown RBP12□□□□□ -0.49
HMGCL-204ENST00000436439 PADI6Q6TGC4 694 aa12□□□□□ -0.49
HMGCL-204ENST00000436439 TRIM67Q6ZTA4 783 aa12□□□□□ -0.49
HMGCL-204ENST00000436439 CATSPER4Q7RTX7 472 aa12□□□□□ -0.49
HMGCL-204ENST00000436439 ALYREFQ86V81 257 aaKnown RBP12□□□□□ -0.49
HMGCL-204ENST00000436439 DHX40Q8IX18 779 aaKnown RBP12□□□□□ -0.49
HMGCL-204ENST00000436439 ADSSL1Q8N142 457 aa12□□□□□ -0.49
HMGCL-204ENST00000436439 MRPL43Q8N983 215 aaKnown RBP12□□□□□ -0.49
HMGCL-204ENST00000436439 FEZF2Q8TBJ5 459 aa12□□□□□ -0.49
HMGCL-204ENST00000436439 AUTS2Q8WXX7 1259 aa12□□□□□ -0.49
HMGCL-204ENST00000436439 MRPL9Q9BYD2 267 aaKnown RBP12□□□□□ -0.49
HMGCL-204ENST00000436439 DHX33Q9H6R0 707 aaKnown RBP12□□□□□ -0.49
HMGCL-204ENST00000436439 MINDY3Q9H8M7 445 aa12□□□□□ -0.49
HMGCL-204ENST00000436439 OLFML3Q9NRN5 406 aa12□□□□□ -0.49
HMGCL-204ENST00000436439 FAM105AQ9NUU6 356 aa12□□□□□ -0.49
HMGCL-204ENST00000436439 TBC1D13Q9NVG8 400 aa12□□□□□ -0.49
HMGCL-204ENST00000436439 DNAJB4Q9UDY4 337 aa12□□□□□ -0.49
HMGCL-204ENST00000436439 COL4A3BPQ9Y5P4 624 aa12□□□□□ -0.49
HMGCL-204ENST00000436439 MYO10Q9HD67 2058 aa11.99□□□□□ -0.49
HMGCL-204ENST00000436439 PLXNA3P51805 1871 aa11.99□□□□□ -0.49
HMGCL-204ENST00000436439 TMEM221A6NGB7 291 aa11.99□□□□□ -0.49
HMGCL-204ENST00000436439 M0R296 226 aa11.99□□□□□ -0.49
HMGCL-204ENST00000436439 CLASP2O75122 1294 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms