RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 ERVK-5Q9HDB9 667 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 TMEM161AQ9NX61 479 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 SLC9A2Q9UBY0 812 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 SEC63Q9UGP8 760 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 USTQ9Y2C2 406 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 UBIAD1Q9Y5Z9 338 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 ANKRD11Q6UB99 2663 aaPredicted RBP9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 CACNA1IQ9P0X4 2223 aa9.58□□□□□ -0.88
NIF3L1-208ENST00000436412 HIDE1A8MVS5 230 aa9.57□□□□□ -0.88
NIF3L1-208ENST00000436412 RGS9O75916 674 aaPredicted RBP9.57□□□□□ -0.88
NIF3L1-208ENST00000436412 RARAP10276 462 aa9.57□□□□□ -0.88
NIF3L1-208ENST00000436412 SP100P23497 879 aaPredicted RBP9.57□□□□□ -0.88
NIF3L1-208ENST00000436412 KIF5BP33176 963 aa9.57□□□□□ -0.88
NIF3L1-208ENST00000436412 STAT5BP51692 787 aa9.57□□□□□ -0.88
NIF3L1-208ENST00000436412 WTAPQ15007 396 aa9.57□□□□□ -0.88
NIF3L1-208ENST00000436412 TMEM266Q2M3C6 531 aa9.57□□□□□ -0.88
NIF3L1-208ENST00000436412 LLGL2Q6P1M3 1020 aa9.57□□□□□ -0.88
NIF3L1-208ENST00000436412 KCNT2Q6UVM3 1135 aa9.57□□□□□ -0.88
NIF3L1-208ENST00000436412 TMC7Q7Z402 723 aa9.57□□□□□ -0.88
NIF3L1-208ENST00000436412 DMRTC2Q8IXT2 367 aaPredicted RBP9.57□□□□□ -0.88
NIF3L1-208ENST00000436412 MRPL43Q8N983 215 aaKnown RBP9.57□□□□□ -0.88
NIF3L1-208ENST00000436412 ZNF558Q96NG5 402 aa9.57□□□□□ -0.88
NIF3L1-208ENST00000436412 RTP3Q9BQQ7 232 aa9.57□□□□□ -0.88
NIF3L1-208ENST00000436412 LZTS2Q9BRK4 669 aa9.57□□□□□ -0.88
NIF3L1-208ENST00000436412 APOL5Q9BWW9 433 aa9.57□□□□□ -0.88
NIF3L1-208ENST00000436412 POMKQ9H5K3 350 aa9.57□□□□□ -0.88
NIF3L1-208ENST00000436412 PSTPIP2Q9H939 334 aa9.57□□□□□ -0.88
NIF3L1-208ENST00000436412 JADE2Q9NQC1 790 aa9.57□□□□□ -0.88
NIF3L1-208ENST00000436412 SPG21Q9NZD8 308 aa9.57□□□□□ -0.88
NIF3L1-208ENST00000436412 FRRS1LQ9P0K9 344 aa9.57□□□□□ -0.88
NIF3L1-208ENST00000436412 ST3GAL5Q9UNP4 418 aa9.57□□□□□ -0.88
NIF3L1-208ENST00000436412 NOC2LQ9Y3T9 749 aaKnown RBP9.57□□□□□ -0.88
NIF3L1-208ENST00000436412 NFASCO94856 1347 aa9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 CARNS1A5YM72 827 aa9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 TNFRSF10BO14763 440 aa9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 HBP1O60381 514 aa9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 MGEA5O60502 916 aa9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 IBSPP21815 317 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 GNAQP50148 359 aa9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 APOBRQ0VD83 1088 aa9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 SMC1AQ14683 1233 aaKnown RBP9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 PCSK7Q16549 785 aa9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 ATAT1Q5SQI0 421 aa9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 TMEM164Q5U3C3 297 aa9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 SHISA2Q6UWI4 295 aa9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 TEX2Q8IWB9 1127 aa9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 CCDC105Q8IYK2 499 aa9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 KIAA0319LQ8IZA0 1049 aa9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 RGL4Q8IZJ4 473 aa9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 FMR1NBQ8N0W7 255 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 LRRC43Q8N309 656 aa9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 TDRD5Q8NAT2 981 aaKnown RBP9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 COL26A1Q96A83 441 aa9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 ZBTB10Q96DT7 871 aa9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 SDF4Q9BRK5 362 aa9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 ZMYND15Q9H091 742 aa9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 KCNH7Q9NS40 1196 aa9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 DZANK1Q9NVP4 752 aa9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 GINS2Q9Y248 185 aa9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 HCFC2Q9Y5Z7 792 aa9.56□□□□□ -0.88
NIF3L1-208ENST00000436412 FAM208BQ5VWN6 2430 aa9.55□□□□□ -0.88
NIF3L1-208ENST00000436412 COL1A2P08123 1366 aa9.55□□□□□ -0.88
NIF3L1-208ENST00000436412 C2orf71A6NGG8 1288 aa9.55□□□□□ -0.88
NIF3L1-208ENST00000436412 DDAH1O94760 285 aa9.55□□□□□ -0.88
NIF3L1-208ENST00000436412 AOC1P19801 751 aa9.55□□□□□ -0.88
NIF3L1-208ENST00000436412 KLRC1P26715 233 aa9.55□□□□□ -0.88
NIF3L1-208ENST00000436412 CRYBB1P53674 252 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-208ENST00000436412 ACTR2P61160 394 aa9.55□□□□□ -0.88
NIF3L1-208ENST00000436412 GIT2Q14161 759 aa9.55□□□□□ -0.88
NIF3L1-208ENST00000436412 ZNF484Q5JVG2 852 aa9.55□□□□□ -0.88
NIF3L1-208ENST00000436412 KIAA1841Q6NSI8 718 aa9.55□□□□□ -0.88
NIF3L1-208ENST00000436412 RALYLQ86SE5 291 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-208ENST00000436412 ABI1Q8IZP0 508 aa9.55□□□□□ -0.88
NIF3L1-208ENST00000436412 CTCFLQ8NI51 663 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-208ENST00000436412 TRAPPC12Q8WVT3 735 aa9.55□□□□□ -0.88
NIF3L1-208ENST00000436412 PIBF1Q8WXW3 757 aa9.55□□□□□ -0.88
NIF3L1-208ENST00000436412 RSPH1Q8WYR4 309 aa9.55□□□□□ -0.88
NIF3L1-208ENST00000436412 TTC9Q92623 222 aa9.55□□□□□ -0.88
NIF3L1-208ENST00000436412 ACSF2Q96CM8 615 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-208ENST00000436412 CASD1Q96PB1 797 aa9.55□□□□□ -0.88
NIF3L1-208ENST00000436412 LNPKQ9C0E8 428 aa9.55□□□□□ -0.88
NIF3L1-208ENST00000436412 CYP26B1Q9NR63 512 aa9.55□□□□□ -0.88
NIF3L1-208ENST00000436412 USP24Q9UPU5 2620 aa9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 IGKV6D-21A0A0A0MT36 114 aa9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 C9orf172C9J069 976 aa9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 CLASP2O75122 1294 aaKnown RBP9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 XYLBO75191 536 aa9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 EOMESO95936 686 aa9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 LMNAP02545 664 aaKnown RBP9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 ASGR2P07307 311 aa9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 FGFR1P11362 822 aa9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 NRLP54845 237 aa9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 DSC3Q14574 896 aa9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 ANGPT1Q15389 498 aa9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 FAM160B1Q5W0V3 765 aa9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 C16orf46Q6P387 395 aa9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 LRRC55Q6ZSA7 311 aa9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 OTOP3Q7RTS5 596 aa9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 DGLUCYQ7Z3D6 616 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms