RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 SMTNP53814 917 aa20.11■□□□□ 0.81
HMGN1-207ENST00000436324 OSTNP61366 133 aa20.11■□□□□ 0.81
HMGN1-207ENST00000436324 ZNF568Q3ZCX4 644 aa20.11■□□□□ 0.81
HMGN1-207ENST00000436324 USP49Q70CQ1 688 aa20.11■□□□□ 0.81
HMGN1-207ENST00000436324 APBB1IPQ7Z5R6 666 aaPredicted RBP20.11■□□□□ 0.81
HMGN1-207ENST00000436324 SPIRE2Q8WWL2 714 aa20.11■□□□□ 0.81
HMGN1-207ENST00000436324 RAD54LQ92698 747 aa20.11■□□□□ 0.81
HMGN1-207ENST00000436324 KLHL5Q96PQ7 755 aa20.11■□□□□ 0.81
HMGN1-207ENST00000436324 PAAF1Q9BRP4 392 aa20.11■□□□□ 0.81
HMGN1-207ENST00000436324 TCHPQ9BT92 498 aa20.11■□□□□ 0.81
HMGN1-207ENST00000436324 HERC2P3Q9BVR0 1158 aa20.11■□□□□ 0.81
HMGN1-207ENST00000436324 CDT1Q9H211 546 aa20.11■□□□□ 0.81
HMGN1-207ENST00000436324 S1PR5Q9H228 398 aa20.11■□□□□ 0.81
HMGN1-207ENST00000436324 MRPL17Q9NRX2 175 aaKnown RBP20.11■□□□□ 0.81
HMGN1-207ENST00000436324 KCND2Q9NZV8 630 aa20.11■□□□□ 0.81
HMGN1-207ENST00000436324 CDH22Q9UJ99 828 aa20.11■□□□□ 0.81
HMGN1-207ENST00000436324 FBXO2Q9UK22 296 aaPredicted RBP20.11■□□□□ 0.81
HMGN1-207ENST00000436324 IRAK3Q9Y616 596 aa20.11■□□□□ 0.81
HMGN1-207ENST00000436324 C19orf67A6NJJ6 358 aa20.1■□□□□ 0.81
HMGN1-207ENST00000436324 KRT18P05783 430 aaKnown RBP20.1■□□□□ 0.81
HMGN1-207ENST00000436324 URODP06132 367 aa20.1■□□□□ 0.81
HMGN1-207ENST00000436324 HSP90AA1P07900 732 aaKnown RBP20.1■□□□□ 0.81
HMGN1-207ENST00000436324 KCNA4P22459 653 aa20.1■□□□□ 0.81
HMGN1-207ENST00000436324 KLRC2P26717 231 aa20.1■□□□□ 0.81
HMGN1-207ENST00000436324 STRN3Q13033 797 aa20.1■□□□□ 0.81
HMGN1-207ENST00000436324 GLRA4Q5JXX5 417 aa20.1■□□□□ 0.81
HMGN1-207ENST00000436324 KANK3Q6NY19 840 aa20.1■□□□□ 0.81
HMGN1-207ENST00000436324 C12orf76Q8N812 135 aaPredicted RBP20.1■□□□□ 0.81
HMGN1-207ENST00000436324 CEP120Q8N960 986 aa20.1■□□□□ 0.81
HMGN1-207ENST00000436324 SPRYD3Q8NCJ5 442 aa20.1■□□□□ 0.81
HMGN1-207ENST00000436324 HASPINQ8TF76 798 aa20.1■□□□□ 0.81
HMGN1-207ENST00000436324 ZBTB45Q96K62 511 aaPredicted RBP20.1■□□□□ 0.81
HMGN1-207ENST00000436324 B3GALT6Q96L58 329 aa20.1■□□□□ 0.81
HMGN1-207ENST00000436324 USP28Q96RU2 1077 aa20.1■□□□□ 0.81
HMGN1-207ENST00000436324 REEP2Q9BRK0 252 aa20.1■□□□□ 0.81
HMGN1-207ENST00000436324 NTPCRQ9BSD7 190 aaKnown RBP20.1■□□□□ 0.81
HMGN1-207ENST00000436324 EMILIN2Q9BXX0 1053 aa20.1■□□□□ 0.81
HMGN1-207ENST00000436324 ZHX3Q9H4I2 956 aa20.1■□□□□ 0.81
HMGN1-207ENST00000436324 STK39Q9UEW8 545 aa20.1■□□□□ 0.81
HMGN1-207ENST00000436324 SRPRBQ9Y5M8 271 aaKnown RBP20.1■□□□□ 0.81
HMGN1-207ENST00000436324 ZMYM2Q9UBW7 1377 aa20.09■□□□□ 0.81
HMGN1-207ENST00000436324 LILRB3O75022 631 aa20.09■□□□□ 0.81
HMGN1-207ENST00000436324 TADA2AO75478 443 aa20.09■□□□□ 0.81
HMGN1-207ENST00000436324 FAM13AO94988 1023 aa20.09■□□□□ 0.81
HMGN1-207ENST00000436324 CNPP09543 421 aaKnown RBP20.09■□□□□ 0.81
HMGN1-207ENST00000436324 HOXB8P17481 243 aaPredicted RBP20.09■□□□□ 0.81
HMGN1-207ENST00000436324 TUSC3Q13454 348 aa20.09■□□□□ 0.81
HMGN1-207ENST00000436324 HSP90AA2PQ14568 343 aaPredicted RBP20.09■□□□□ 0.81
HMGN1-207ENST00000436324 TPRNQ4KMQ1 711 aa20.09■□□□□ 0.81
HMGN1-207ENST00000436324 RARS2Q5T160 578 aaKnown RBP20.09■□□□□ 0.81
HMGN1-207ENST00000436324 KIAA1841Q6NSI8 718 aa20.09■□□□□ 0.81
HMGN1-207ENST00000436324 FUT10Q6P4F1 479 aa20.09■□□□□ 0.81
HMGN1-207ENST00000436324 TMEM161BQ8NDZ6 487 aa20.09■□□□□ 0.81
HMGN1-207ENST00000436324 SLC22A17Q8WUG5 538 aa20.09■□□□□ 0.81
HMGN1-207ENST00000436324 RPGRIP1Q96KN7 1286 aa20.09■□□□□ 0.81
HMGN1-207ENST00000436324 POP1Q99575 1024 aaKnown RBP20.09■□□□□ 0.81
HMGN1-207ENST00000436324 GPR62Q9BZJ7 368 aa20.09■□□□□ 0.81
HMGN1-207ENST00000436324 CCSER1Q9C0I3 900 aa20.09■□□□□ 0.81
HMGN1-207ENST00000436324 ZSCAN16Q9H4T2 348 aaPredicted RBP20.09■□□□□ 0.81
HMGN1-207ENST00000436324 PTPRHQ9HD43 1115 aa20.09■□□□□ 0.81
HMGN1-207ENST00000436324 ADAM28Q9UKQ2 775 aa20.09■□□□□ 0.81
HMGN1-207ENST00000436324 NCOR1O75376 2440 aa20.09■□□□□ 0.81
HMGN1-207ENST00000436324 WEE2P0C1S8 567 aa20.08■□□□□ 0.81
HMGN1-207ENST00000436324 MAPTP10636 758 aaKnown RBP20.08■□□□□ 0.81
HMGN1-207ENST00000436324 GLUD2P49448 558 aa20.08■□□□□ 0.81
HMGN1-207ENST00000436324 MYCT1Q8N699 235 aa20.08■□□□□ 0.81
HMGN1-207ENST00000436324 SUSD6Q92537 303 aa20.08■□□□□ 0.81
HMGN1-207ENST00000436324 CCDC94Q9BW85 323 aaPredicted RBP20.08■□□□□ 0.81
HMGN1-207ENST00000436324 LARSQ9P2J5 1176 aaKnown RBP20.08■□□□□ 0.81
HMGN1-207ENST00000436324 ANKFY1Q9P2R3 1169 aa20.08■□□□□ 0.81
HMGN1-207ENST00000436324 KCNG1Q9UIX4 513 aa20.08■□□□□ 0.81
HMGN1-207ENST00000436324 SPDYE4A6NLX3 237 aa20.07■□□□□ 0.8
HMGN1-207ENST00000436324 PI4K2BG5E9Z4 385 aa20.07■□□□□ 0.8
HMGN1-207ENST00000436324 MYBP10242 640 aa20.07■□□□□ 0.8
HMGN1-207ENST00000436324 SP100P23497 879 aaPredicted RBP20.07■□□□□ 0.8
HMGN1-207ENST00000436324 GRM5P41594 1212 aa20.07■□□□□ 0.8
HMGN1-207ENST00000436324 YARSP54577 528 aaKnown RBP20.07■□□□□ 0.8
HMGN1-207ENST00000436324 KIAA0319Q5VV43 1072 aa20.07■□□□□ 0.8
HMGN1-207ENST00000436324 MPZL3Q6UWV2 235 aa20.07■□□□□ 0.8
HMGN1-207ENST00000436324 PPFIBP1Q86W92 1011 aa20.07■□□□□ 0.8
HMGN1-207ENST00000436324 RNF168Q8IYW5 571 aaPredicted RBP20.07■□□□□ 0.8
HMGN1-207ENST00000436324 LARP4BQ92615 738 aaKnown RBP20.07■□□□□ 0.8
HMGN1-207ENST00000436324 BICD1Q96G01 975 aa20.07■□□□□ 0.8
HMGN1-207ENST00000436324 PHF7Q9BWX1 381 aaPredicted RBP20.07■□□□□ 0.8
HMGN1-207ENST00000436324 C1QTNF1Q9BXJ1 281 aa20.07■□□□□ 0.8
HMGN1-207ENST00000436324 TFIP11Q9UBB9 837 aaKnown RBP20.07■□□□□ 0.8
HMGN1-207ENST00000436324 CCDC39Q9UFE4 941 aa20.07■□□□□ 0.8
HMGN1-207ENST00000436324 ODF2LQ9ULJ1 636 aa20.07■□□□□ 0.8
HMGN1-207ENST00000436324 TDRD15B5MCY1 1934 aaKnown RBP20.06■□□□□ 0.8
HMGN1-207ENST00000436324 FAM86C2PA6NEL3 165 aa20.06■□□□□ 0.8
HMGN1-207ENST00000436324 KIF4AO95239 1232 aa20.06■□□□□ 0.8
HMGN1-207ENST00000436324 EFEMP2O95967 443 aa20.06■□□□□ 0.8
HMGN1-207ENST00000436324 MCF2P10911 925 aa20.06■□□□□ 0.8
HMGN1-207ENST00000436324 PROZP22891 400 aa20.06■□□□□ 0.8
HMGN1-207ENST00000436324 DDIT3P35638 169 aa20.06■□□□□ 0.8
HMGN1-207ENST00000436324 MATR3P43243 847 aaKnown RBP eCLIP20.06■□□□□ 0.8
HMGN1-207ENST00000436324 DSG1Q02413 1049 aa20.06■□□□□ 0.8
HMGN1-207ENST00000436324 CBX2Q14781 532 aaPredicted RBP20.06■□□□□ 0.8
HMGN1-207ENST00000436324 SLC39A14Q15043 492 aa20.06■□□□□ 0.8
HMGN1-207ENST00000436324 STK38Q15208 465 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms