RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 ZNF844Q08AG5 666 aa19.99■□□□□ 0.79
CLK1-205ENST00000434813 SPDYCQ5MJ68 293 aa19.99■□□□□ 0.79
CLK1-205ENST00000434813 DUPD1Q68J44 220 aa19.99■□□□□ 0.79
CLK1-205ENST00000434813 CDHR1Q96JP9 859 aa19.99■□□□□ 0.79
CLK1-205ENST00000434813 DPH5Q9H2P9 285 aa19.99■□□□□ 0.79
CLK1-205ENST00000434813 JPH1Q9HDC5 661 aaPredicted RBP19.99■□□□□ 0.79
CLK1-205ENST00000434813 ADARB2Q9NS39 739 aaKnown RBP19.99■□□□□ 0.79
CLK1-205ENST00000434813 TOPORSQ9NS56 1045 aaPredicted RBP19.99■□□□□ 0.79
CLK1-205ENST00000434813 RAB20Q9NX57 234 aa19.99■□□□□ 0.79
CLK1-205ENST00000434813 ZNFX1Q9P2E3 1918 aaKnown RBP19.99■□□□□ 0.79
CLK1-205ENST00000434813 ZEB2O60315 1214 aa19.98■□□□□ 0.79
CLK1-205ENST00000434813 PHF2O75151 1096 aa19.98■□□□□ 0.79
CLK1-205ENST00000434813 GGPS1O95749 300 aa19.98■□□□□ 0.79
CLK1-205ENST00000434813 PTPRAP18433 802 aa19.98■□□□□ 0.79
CLK1-205ENST00000434813 COMTP21964 271 aa19.98■□□□□ 0.79
CLK1-205ENST00000434813 DSG3P32926 999 aa19.98■□□□□ 0.79
CLK1-205ENST00000434813 MARCKSL1P49006 195 aa19.98■□□□□ 0.79
CLK1-205ENST00000434813 ATP1A2P50993 1020 aa19.98■□□□□ 0.79
CLK1-205ENST00000434813 GPD1LQ8N335 351 aa19.98■□□□□ 0.79
CLK1-205ENST00000434813 BCAS4Q8TDM0 211 aa19.98■□□□□ 0.79
CLK1-205ENST00000434813 POMGNT1Q8WZA1 660 aa19.98■□□□□ 0.79
CLK1-205ENST00000434813 CD101Q93033 1021 aa19.98■□□□□ 0.79
CLK1-205ENST00000434813 ERP44Q9BS26 406 aa19.98■□□□□ 0.79
CLK1-205ENST00000434813 WNT8AQ9H1J5 351 aa19.98■□□□□ 0.79
CLK1-205ENST00000434813 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.98■□□□□ 0.792e-7■■■■■ 64.8
CLK1-205ENST00000434813 ATP2A1O14983 1001 aa19.98■□□□□ 0.79
CLK1-205ENST00000434813 PEX5P50542 639 aa19.98■□□□□ 0.79
CLK1-205ENST00000434813 SOX10P56693 466 aa19.98■□□□□ 0.79
CLK1-205ENST00000434813 IRX5P78411 483 aaPredicted RBP19.98■□□□□ 0.79
CLK1-205ENST00000434813 BRDTQ58F21 947 aaPredicted RBP19.98■□□□□ 0.79
CLK1-205ENST00000434813 ZNF564Q8TBZ8 553 aaPredicted RBP19.98■□□□□ 0.79
CLK1-205ENST00000434813 UBLCP1Q8WVY7 318 aaPredicted RBP19.98■□□□□ 0.79
CLK1-205ENST00000434813 POP1Q99575 1024 aaKnown RBP19.98■□□□□ 0.79
CLK1-205ENST00000434813 ATP6V0A4Q9HBG4 840 aa19.98■□□□□ 0.79
CLK1-205ENST00000434813 ACP6Q9NPH0 428 aa19.98■□□□□ 0.79
CLK1-205ENST00000434813 XPNPEP1Q9NQW7 623 aa19.98■□□□□ 0.79
CLK1-205ENST00000434813 UVRAGQ9P2Y5 699 aa19.98■□□□□ 0.79
CLK1-205ENST00000434813 FZD1Q9UP38 647 aa19.98■□□□□ 0.79
CLK1-205ENST00000434813 TRPC6Q9Y210 931 aa19.98■□□□□ 0.79
CLK1-205ENST00000434813 TMEM110-MUSTN1A8MSY1 372 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 HNRNPDLO14979 420 aaKnown RBP19.97■□□□□ 0.79
CLK1-205ENST00000434813 ATMINO43313 823 aaPredicted RBP19.97■□□□□ 0.79
CLK1-205ENST00000434813 STAM2O75886 525 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 CHRNA3P32297 505 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 ABCD1P33897 745 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 GCNT1Q02742 428 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 BIRC3Q13489 604 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 MESDQ14696 234 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 TTC19Q6DKK2 380 aaPredicted RBP19.97■□□□□ 0.79
CLK1-205ENST00000434813 RUFY4Q6ZNE9 571 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 SV2AQ7L0J3 742 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 ENOSF1Q7L5Y1 443 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 ADAT2Q7Z6V5 191 aaKnown RBP19.97■□□□□ 0.79
CLK1-205ENST00000434813 JAMLQ86YT9 394 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 EFCAB13Q8IY85 973 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 DDX1Q92499 740 aaKnown RBP19.97■□□□□ 0.79
CLK1-205ENST00000434813 KLRG1Q96E93 195 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 FMO2Q99518 471 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 TXLNGYQ9BZA5 131 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 ARHGAP28Q9P2N2 729 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 RASAL2Q9UJF2 1139 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 H0YCG3 227 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 ZC3H11AO75152 810 aaKnown RBP eCLIP19.97■□□□□ 0.791e-16■■■□□ 18.6
CLK1-205ENST00000434813 PPFIA2O75334 1257 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 CTNNA2P26232 953 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 COPB2P35606 906 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 DRG2P55039 364 aaKnown RBP19.97■□□□□ 0.79
CLK1-205ENST00000434813 PRKCEQ02156 737 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 SEL1L2Q5TEA6 688 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 SWSAP1Q6NVH7 229 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 CCDC60Q8IWA6 550 aaPredicted RBP19.97■□□□□ 0.79
CLK1-205ENST00000434813 OR2W6PQ8NHA6 318 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 ZNF653Q96CK0 615 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 NUP85Q9BW27 656 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 CYP26B1Q9NR63 512 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 ZDHHC18Q9NUE0 388 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 CYP39A1Q9NYL5 469 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 SLC9A2Q9UBY0 812 aa19.97■□□□□ 0.79
CLK1-205ENST00000434813 SEPT9Q9UHD8 586 aaPredicted RBP19.97■□□□□ 0.79
CLK1-205ENST00000434813 DOCK5Q9H7D0 1870 aa19.96■□□□□ 0.79
CLK1-205ENST00000434813 MYO1FO00160 1098 aa19.96■□□□□ 0.79
CLK1-205ENST00000434813 CCT5P48643 541 aa19.96■□□□□ 0.79
CLK1-205ENST00000434813 HMGCS2P54868 508 aa19.96■□□□□ 0.79
CLK1-205ENST00000434813 DHX9Q08211 1270 aaKnown RBP19.96■□□□□ 0.79
CLK1-205ENST00000434813 AADACL2Q6P093 401 aa19.96■□□□□ 0.79
CLK1-205ENST00000434813 TAS1R3Q7RTX0 852 aa19.96■□□□□ 0.79
CLK1-205ENST00000434813 ARFGAP2Q8N6H7 521 aa19.96■□□□□ 0.79
CLK1-205ENST00000434813 PRELID2Q8N945 189 aa19.96■□□□□ 0.79
CLK1-205ENST00000434813 DCPSQ96C86 337 aaKnown RBP19.96■□□□□ 0.79
CLK1-205ENST00000434813 TEX13BQ9BXU2 312 aa19.96■□□□□ 0.79
CLK1-205ENST00000434813 MAF1Q9H063 256 aa19.96■□□□□ 0.79
CLK1-205ENST00000434813 ACAD9Q9H845 621 aa19.96■□□□□ 0.79
CLK1-205ENST00000434813 PCYOX1Q9UHG3 505 aa19.96■□□□□ 0.79
CLK1-205ENST00000434813 FEZ2Q9UHY8 353 aaPredicted RBP19.96■□□□□ 0.79
CLK1-205ENST00000434813 SBF1O95248 1867 aa19.96■□□□□ 0.79
CLK1-205ENST00000434813 LSP1P33241 339 aa19.95■□□□□ 0.78
CLK1-205ENST00000434813 ACTR2P61160 394 aa19.95■□□□□ 0.78
CLK1-205ENST00000434813 TMEM132BQ14DG7 1078 aa19.95■□□□□ 0.78
CLK1-205ENST00000434813 ABHD15Q6UXT9 468 aa19.95■□□□□ 0.78
CLK1-205ENST00000434813 GLG1Q92896 1179 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms