RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 TNNC1P63316 161 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 MAPK7Q13164 816 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 DALRD3Q5D0E6 543 aaKnown RBP8.07□□□□□ -1.12
COL17A1-204ENST00000433822 EMC10Q5UCC4 262 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 ALKBH5Q6P6C2 394 aaKnown RBP8.07□□□□□ -1.12
COL17A1-204ENST00000433822 INTS8Q75QN2 995 aaKnown RBP8.07□□□□□ -1.12
COL17A1-204ENST00000433822 IFT20Q8IY31 132 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 C4orf19Q8IY42 314 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 NIM1KQ8IY84 436 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 FAM186BQ8IYM0 893 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 LARGE2Q8N3Y3 721 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 RASGEF1CQ8N431 466 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 FAM133AQ8N9E0 248 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 LRRC57Q8N9N7 239 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 GJA10Q969M2 543 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 HOOK2Q96ED9 719 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 DYDC2Q96IM9 177 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 SH3GL2Q99962 352 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 SENP7Q9BQF6 1050 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 CRACR2AQ9BSW2 395 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 SELENOOQ9BVL4 669 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 C17orf75Q9HAS0 396 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 PDE11AQ9HCR9 933 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 GDF3Q9NR23 364 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 ST7Q9NRC1 585 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 AGPAT3Q9NRZ7 376 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 ANKEF1Q9NU02 776 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 TBC1D7Q9P0N9 293 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 GCNT4Q9P109 453 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 PIM2Q9P1W9 311 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 SUCLA2Q9P2R7 463 aaPredicted RBP8.07□□□□□ -1.12
COL17A1-204ENST00000433822 ADAMTS1Q9UHI8 967 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 KCNG1Q9UIX4 513 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 SALL4Q9UJQ4 1053 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 DOLKQ9UPQ8 538 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 FRMD4BQ9Y2L6 1034 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 SCN4AP35499 1836 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 PFASO15067 1338 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 LTBP3Q9NS15 1303 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 SZT2Q5T011 3432 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 PARP14Q460N5 1801 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 KRTAP9-6A0A140TA67 174 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 ARHGEF35A5YM69 484 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 RSPH10B2B2RC85 870 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 TCP10L2B9ZVM9 353 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 F8VZ95 297 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 DHX15O43143 795 aaKnown RBP8.06□□□□□ -1.12
COL17A1-204ENST00000433822 RAD21O60216 631 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 OPA1O60313 960 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 CTNND1O60716 968 aaKnown RBP8.06□□□□□ -1.12
COL17A1-204ENST00000433822 PALMO75781 387 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 STAM2O75886 525 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 KIF4AO95239 1232 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 TFRCP02786 760 aaKnown RBP8.06□□□□□ -1.12
COL17A1-204ENST00000433822 IVLP07476 585 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 H2AFZP0C0S5 128 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 TMEM253P0C7T8 217 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 RSPH10BP0C881 870 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 ZBTB48P10074 688 aaPredicted RBP8.06□□□□□ -1.12
COL17A1-204ENST00000433822 ATP4AP20648 1035 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 JAK3P52333 1124 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 RTP1P59025 263 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 GTF2BQ00403 316 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 CYP4A11Q02928 519 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 TNP2Q05952 138 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 CETN1Q12798 172 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 PPFIA1Q13136 1202 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 PAK2Q13177 524 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 KIF22Q14807 665 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 KIAA1755Q5JYT7 1200 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 SPDYCQ5MJ68 293 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 C8orf74Q6P047 294 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 H2AFVQ71UI9 128 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 ZNF571Q7Z3V5 609 aaPredicted RBP8.06□□□□□ -1.12
COL17A1-204ENST00000433822 TPH2Q8IWU9 490 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 CD302Q8IX05 232 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 MYCT1Q8N699 235 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 SLC30A5Q8TAD4 765 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 CYP2W1Q8TAV3 490 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 SCFD2Q8WU76 684 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 CLEC4DQ8WXI8 215 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 RFFLQ8WZ73 363 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 TAF4BQ92750 862 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 CAPZA3Q96KX2 299 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 FAM81BQ96LP2 452 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 DRC1Q96MC2 740 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 LXNQ9BS40 222 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 NIFKQ9BYG3 293 aaKnown RBP8.06□□□□□ -1.12
COL17A1-204ENST00000433822 MCOLN1Q9GZU1 580 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 UNC45AQ9H3U1 944 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 ZHX3Q9H4I2 956 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 SLITRK6Q9H5Y7 841 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 SLC38A10Q9HBR0 1119 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 RGL1Q9NZL6 768 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 CWC15Q9P013 229 aaKnown RBP8.06□□□□□ -1.12
COL17A1-204ENST00000433822 APEX2Q9UBZ4 518 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 KLF15Q9UIH9 416 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 TFR2Q9UP52 801 aa8.06□□□□□ -1.12
COL17A1-204ENST00000433822 MYPNQ86TC9 1320 aa8.05□□□□□ -1.12
COL17A1-204ENST00000433822 COL4A5P29400 1685 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms