RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 ADAM15Q13444 863 aa7.36□□□□□ -1.23
HDAC9-213ENST00000433709 R3HDM1Q15032 1099 aaKnown RBP7.36□□□□□ -1.23
HDAC9-213ENST00000433709 CT83Q5H943 113 aa7.36□□□□□ -1.23
HDAC9-213ENST00000433709 ZMAT1Q5H9K5 638 aa7.36□□□□□ -1.23
HDAC9-213ENST00000433709 RNF219Q5W0B1 726 aaPredicted RBP7.36□□□□□ -1.23
HDAC9-213ENST00000433709 CCDC62Q6P9F0 684 aa7.36□□□□□ -1.23
HDAC9-213ENST00000433709 USP30Q70CQ3 517 aa7.36□□□□□ -1.23
HDAC9-213ENST00000433709 SPATS2Q86XZ4 545 aaKnown RBP7.36□□□□□ -1.23
HDAC9-213ENST00000433709 RAPGEF4Q8WZA2 1011 aa7.36□□□□□ -1.23
HDAC9-213ENST00000433709 NKD2Q969F2 451 aaPredicted RBP7.36□□□□□ -1.23
HDAC9-213ENST00000433709 HAPLN2Q9GZV7 340 aa7.36□□□□□ -1.23
HDAC9-213ENST00000433709 OR10A2Q9H208 303 aa7.36□□□□□ -1.23
HDAC9-213ENST00000433709 SPON1Q9HCB6 807 aa7.36□□□□□ -1.23
HDAC9-213ENST00000433709 STK32BQ9NY57 414 aa7.36□□□□□ -1.23
HDAC9-213ENST00000433709 KCNG1Q9UIX4 513 aa7.36□□□□□ -1.23
HDAC9-213ENST00000433709 TMPRSS11EQ9UL52 423 aa7.36□□□□□ -1.23
HDAC9-213ENST00000433709 USP18Q9UMW8 372 aa7.36□□□□□ -1.23
HDAC9-213ENST00000433709 COL4A3BPQ9Y5P4 624 aa7.36□□□□□ -1.23
HDAC9-213ENST00000433709 COL18A1P39060 1754 aa7.36□□□□□ -1.23
HDAC9-213ENST00000433709 TNS2Q63HR2 1409 aa7.35□□□□□ -1.23
HDAC9-213ENST00000433709 LRP5O75197 1615 aa7.35□□□□□ -1.23
HDAC9-213ENST00000433709 A0A0A6YYK5 440 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-213ENST00000433709 FYB1O15117 783 aa7.35□□□□□ -1.23
HDAC9-213ENST00000433709 CANXP27824 592 aaKnown RBP7.35□□□□□ -1.23
HDAC9-213ENST00000433709 HOXC9P31274 260 aa7.35□□□□□ -1.23
HDAC9-213ENST00000433709 CDKN1CP49918 316 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-213ENST00000433709 EPHB4P54760 987 aa7.35□□□□□ -1.23
HDAC9-213ENST00000433709 SCAND1P57086 179 aa7.35□□□□□ -1.23
HDAC9-213ENST00000433709 SURF1Q15526 300 aa7.35□□□□□ -1.23
HDAC9-213ENST00000433709 PITRM1Q5JRX3 1037 aa7.35□□□□□ -1.23
HDAC9-213ENST00000433709 LILRA6Q6PI73 481 aa7.35□□□□□ -1.23
HDAC9-213ENST00000433709 LIMS2Q7Z4I7 341 aa7.35□□□□□ -1.23
HDAC9-213ENST00000433709 LYSMD2Q8IV50 215 aa7.35□□□□□ -1.23
HDAC9-213ENST00000433709 OR14K1Q8NGZ2 314 aa7.35□□□□□ -1.23
HDAC9-213ENST00000433709 RELTQ969Z4 430 aa7.35□□□□□ -1.23
HDAC9-213ENST00000433709 SOX7Q9BT81 388 aa7.35□□□□□ -1.23
HDAC9-213ENST00000433709 BDH2Q9BUT1 245 aa7.35□□□□□ -1.23
HDAC9-213ENST00000433709 PCDH12Q9NPG4 1184 aa7.35□□□□□ -1.23
HDAC9-213ENST00000433709 POLR3BQ9NW08 1133 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-213ENST00000433709 PPP4R1LQ9P1A2 415 aa7.35□□□□□ -1.23
HDAC9-213ENST00000433709 NR2E1Q9Y466 385 aa7.35□□□□□ -1.23
HDAC9-213ENST00000433709 FAM208AQ9UK61 1670 aaKnown RBP7.35□□□□□ -1.23
HDAC9-213ENST00000433709 MAP3K19Q56UN5 1328 aa7.34□□□□□ -1.23
HDAC9-213ENST00000433709 RGPD3A6NKT7 1758 aaPredicted RBP7.34□□□□□ -1.23
HDAC9-213ENST00000433709 RGPD4Q7Z3J3 1758 aa7.34□□□□□ -1.23
HDAC9-213ENST00000433709 CELA3BP08861 270 aa7.34□□□□□ -1.23
HDAC9-213ENST00000433709 HNRNPLP14866 589 aaKnown RBP eCLIP7.34□□□□□ -1.23
HDAC9-213ENST00000433709 CDK11BP21127 795 aaKnown RBP7.34□□□□□ -1.23
HDAC9-213ENST00000433709 ACAP1Q15027 740 aa7.34□□□□□ -1.23
HDAC9-213ENST00000433709 ZNF568Q3ZCX4 644 aa7.34□□□□□ -1.23
HDAC9-213ENST00000433709 LCE4AQ5TA78 99 aa7.34□□□□□ -1.23
HDAC9-213ENST00000433709 KLHDC10Q6PID8 442 aa7.34□□□□□ -1.23
HDAC9-213ENST00000433709 ZCRB1Q8TBF4 217 aaKnown RBP7.34□□□□□ -1.23
HDAC9-213ENST00000433709 EAF2Q96CJ1 260 aaPredicted RBP7.34□□□□□ -1.23
HDAC9-213ENST00000433709 NEIL1Q96FI4 390 aaPredicted RBP7.34□□□□□ -1.23
HDAC9-213ENST00000433709 GPATCH3Q96I76 525 aa7.34□□□□□ -1.23
HDAC9-213ENST00000433709 WDR92Q96MX6 357 aa7.34□□□□□ -1.23
HDAC9-213ENST00000433709 LRRC37BQ96QE4 947 aa7.34□□□□□ -1.23
HDAC9-213ENST00000433709 MEGF9Q9H1U4 602 aa7.34□□□□□ -1.23
HDAC9-213ENST00000433709 SYNPO2Q9UMS6 1093 aa7.34□□□□□ -1.23
HDAC9-213ENST00000433709 VWA7Q9Y334 891 aa7.34□□□□□ -1.23
HDAC9-213ENST00000433709 CTDP1Q9Y5B0 961 aaPredicted RBP7.34□□□□□ -1.23
HDAC9-213ENST00000433709 PCDHB6Q9Y5E3 794 aa7.34□□□□□ -1.23
HDAC9-213ENST00000433709 NUMBLQ9Y6R0 609 aa7.34□□□□□ -1.23
HDAC9-213ENST00000433709 TNS1Q9HBL0 1735 aaKnown RBP7.34□□□□□ -1.23
HDAC9-213ENST00000433709 LRRC37A3O60309 1634 aa7.34□□□□□ -1.24
HDAC9-213ENST00000433709 INSRP06213 1382 aa7.33□□□□□ -1.24
HDAC9-213ENST00000433709 FLT4P35916 1363 aa7.33□□□□□ -1.24
HDAC9-213ENST00000433709 PLEKHG2Q9H7P9 1386 aa7.33□□□□□ -1.24
HDAC9-213ENST00000433709 C2orf78A6NCI8 922 aa7.33□□□□□ -1.24
HDAC9-213ENST00000433709 NPEPPSL1A6NEC2 478 aa7.33□□□□□ -1.24
HDAC9-213ENST00000433709 GOLGA8AA7E2F4 631 aa7.33□□□□□ -1.24
HDAC9-213ENST00000433709 GOLGA8BA8MQT2 603 aa7.33□□□□□ -1.24
HDAC9-213ENST00000433709 MATN2O00339 956 aa7.33□□□□□ -1.24
HDAC9-213ENST00000433709 MAFGO15525 162 aa7.33□□□□□ -1.24
HDAC9-213ENST00000433709 ARHGAP6O43182 974 aa7.33□□□□□ -1.24
HDAC9-213ENST00000433709 FOXD2O60548 495 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-213ENST00000433709 H2AFYO75367 372 aaKnown RBP7.33□□□□□ -1.24
HDAC9-213ENST00000433709 LPLP06858 475 aa7.33□□□□□ -1.24
HDAC9-213ENST00000433709 TRIM25Q14258 630 aaKnown RBP7.33□□□□□ -1.24
HDAC9-213ENST00000433709 PTPROQ16827 1216 aa7.33□□□□□ -1.24
HDAC9-213ENST00000433709 TXNRD1Q16881 649 aa7.33□□□□□ -1.24
HDAC9-213ENST00000433709 PRPF38AQ8NAV1 312 aaKnown RBP7.33□□□□□ -1.24
HDAC9-213ENST00000433709 CXorf38Q8TB03 319 aa7.33□□□□□ -1.24
HDAC9-213ENST00000433709 TGFBRAP1Q8WUH2 860 aa7.33□□□□□ -1.24
HDAC9-213ENST00000433709 AHCYL2Q96HN2 611 aaKnown RBP7.33□□□□□ -1.24
HDAC9-213ENST00000433709 HIST1H2AHQ96KK5 128 aa7.33□□□□□ -1.24
HDAC9-213ENST00000433709 GNRHR2Q96P88 292 aa7.33□□□□□ -1.24
HDAC9-213ENST00000433709 LMF1Q96S06 567 aa7.33□□□□□ -1.24
HDAC9-213ENST00000433709 HIST1H2AJQ99878 128 aa7.33□□□□□ -1.24
HDAC9-213ENST00000433709 TRIM8Q9BZR9 551 aa7.33□□□□□ -1.24
HDAC9-213ENST00000433709 C14orf119Q9NWQ9 140 aa7.33□□□□□ -1.24
HDAC9-213ENST00000433709 SLC5A4Q9NY91 659 aa7.33□□□□□ -1.24
HDAC9-213ENST00000433709 ARID1BQ8NFD5 2236 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-213ENST00000433709 ITGB3P05106 788 aa7.32□□□□□ -1.24
HDAC9-213ENST00000433709 RAC3P60763 192 aa7.32□□□□□ -1.24
HDAC9-213ENST00000433709 ATP2C1P98194 919 aaPredicted RBP7.32□□□□□ -1.24
HDAC9-213ENST00000433709 HGFACQ04756 655 aa7.32□□□□□ -1.24
HDAC9-213ENST00000433709 PPARAQ07869 468 aa7.32□□□□□ -1.24
HDAC9-213ENST00000433709 NFYCQ13952 458 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms