RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.28□□□□□ -1.08
CNKSR3-202ENST00000433165 CNTNAP5Q8WYK1 1306 aa8.27□□□□□ -1.08
CNKSR3-202ENST00000433165 F5H6K3 240 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 ATP2A1O14983 1001 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 TTI1O43156 1089 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 RAD21O60216 631 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 CEP104O60308 925 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 PEX11AO75192 247 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 CNMDO75829 334 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 UPP2O95045 317 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 TPBGLP0DKB5 382 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 IMPDH2P12268 514 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 FCER1AP12319 257 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 SP100P23497 879 aaPredicted RBP8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 KLRC3Q07444 240 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 KCNMA1Q12791 1236 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 KCTD2Q14681 263 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 CNGA2Q16280 664 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 SFMBT2Q5VUG0 894 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 BTNL9Q6UXG8 535 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 DPP9Q86TI2 863 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 RBM12BQ8IXT5 1001 aaKnown RBP8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 METTL13Q8N6R0 699 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 ENDOVQ8N8Q3 282 aaKnown RBP8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 KIAA0895Q8NCT3 520 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 NEK9Q8TD19 979 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 KCNV2Q8TDN2 545 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 FBF1Q8TES7 1133 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 U2AF1L4Q8WU68 220 aaKnown RBP8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 DCAF4Q8WV16 495 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 ESR2Q92731 530 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 USP6NLQ92738 828 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 AP1M1Q9BXS5 423 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 TEX13BQ9BXU2 312 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 TRIM4Q9C037 500 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 TXNRD2Q9NNW7 524 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 PAK6Q9NQU5 681 aaPredicted RBP8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 PRKAG3Q9UGI9 489 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 STK38LQ9Y2H1 464 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 ATP8A1Q9Y2Q0 1164 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 UTP11Q9Y3A2 253 aaKnown RBP8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 ATP8B3O60423 1300 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 TNKSO95271 1327 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 PLXNB2O15031 1838 aa8.27□□□□□ -1.09
CNKSR3-202ENST00000433165 hCG_1642624A0A1W2PR95 340 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 POTEFA5A3E0 1075 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 NOL4O94818 638 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 FARP2O94887 1054 aaPredicted RBP8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 FGFR1OPO95684 399 aaKnown RBP8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 BMP3P12645 472 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 CYP2B6P20813 491 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 MAGEA8P43361 318 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 PEX5P50542 639 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 CAP1Q01518 475 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 CCDC15Q0P6D6 951 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 DYNC1I2Q13409 638 aaKnown RBP8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 C6orf118Q5T5N4 469 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 SLFN13Q68D06 897 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 TRIM68Q6AZZ1 485 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 OR52E8Q6IFG1 317 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 IRGCQ6NXR0 463 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 CNNM4Q6P4Q7 775 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 FOXR2Q6PJQ5 311 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 DTHD1Q6ZMT9 781 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 TMTC3Q6ZXV5 915 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 FITM2Q8N6M3 262 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 CFAP61Q8NHU2 1237 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 STK32AQ8WU08 396 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 UTP4Q969X6 686 aaKnown RBP8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 FAM136AQ96C01 138 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 CEP95Q96GE4 821 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 TRIM7Q9C029 511 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 MAF1Q9H063 256 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 ZMYND12Q9H0C1 365 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 ZDHHC18Q9NUE0 388 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 CYP39A1Q9NYL5 469 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 NKX1-2Q9UD57 310 aaPredicted RBP8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 ARL2BPQ9Y2Y0 163 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 PARP14Q460N5 1801 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 A0A087X0T9 212 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 KRIT1O00522 736 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 VWA5AO00534 786 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 RGS16O15492 202 aaPredicted RBP8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 UNC5CO95185 931 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 NDUFB10O96000 172 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 FAM228BP0C875 321 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 PYGBP11216 843 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 ELNP15502 786 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 PCK1P35558 622 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 STAT3P40763 770 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 UBA7P41226 1012 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 GNAQP50148 359 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 STAT2P52630 851 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 FAM83BQ5T0W9 1011 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 C10orf76Q5T2E6 689 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 ARMC3Q5W041 872 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 DENND2CQ68D51 928 aa8.26□□□□□ -1.09
CNKSR3-202ENST00000433165 NCAPG2Q86XI2 1143 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms