RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 SEPT14Q6ZU15 432 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 ENOSF1Q7L5Y1 443 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 TMEM143Q96AN5 459 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 FAM213AQ9BRX8 229 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 R3HDMLQ9H3Y0 253 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 SLITRK6Q9H5Y7 841 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 ACP6Q9NPH0 428 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 SEPT11Q9NVA2 429 aaKnown RBP15.03■□□□□ -0
HOXC4-202ENST00000430889 FAM153AQ9UHL3 310 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 KCNH4Q9UQ05 1017 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 CSADQ9Y600 493 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 MCM3APO60318 1980 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 ADGRA2Q96PE1 1338 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 A0A0U1RQG5 324 aaPredicted RBP15.03■□□□□ -0
HOXC4-202ENST00000430889 CXCL11O14625 94 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 SART1O43290 800 aaKnown RBP15.03■□□□□ -0
HOXC4-202ENST00000430889 C4BPAP04003 597 aaKnown RBP15.03■□□□□ -0
HOXC4-202ENST00000430889 TGFB3P10600 412 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 RFC5P40937 340 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 TRADDQ15628 312 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 ZACNQ401N2 412 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 ALS2CLQ60I27 953 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 KLHL7Q8IXQ5 586 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 RIN2Q8WYP3 895 aaPredicted RBP15.03■□□□□ -0
HOXC4-202ENST00000430889 ALG3Q92685 438 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 CD101Q93033 1021 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 AP1M1Q9BXS5 423 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 TMEM134Q9H6X4 195 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 NFU1Q9UMS0 254 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 ALG6Q9Y672 507 aa15.03■□□□□ -0
HOXC4-202ENST00000430889 GOLGA6BA6NDN3 693 aa15.02□□□□□ -0.01
HOXC4-202ENST00000430889 SPDYE5A6NIY4 337 aa15.02□□□□□ -0.01
HOXC4-202ENST00000430889 LIG4P49917 911 aa15.02□□□□□ -0.01
HOXC4-202ENST00000430889 NLRP11P59045 1033 aaKnown RBP15.02□□□□□ -0.01
HOXC4-202ENST00000430889 NEDD9Q14511 834 aa15.02□□□□□ -0.01
HOXC4-202ENST00000430889 IQCKQ8N0W5 287 aa15.02□□□□□ -0.01
HOXC4-202ENST00000430889 WHAMMQ8TF30 809 aa15.02□□□□□ -0.01
HOXC4-202ENST00000430889 PIK3R5Q8WYR1 880 aa15.02□□□□□ -0.01
HOXC4-202ENST00000430889 DHX38Q92620 1227 aaKnown RBP15.02□□□□□ -0.01
HOXC4-202ENST00000430889 DCPSQ96C86 337 aaKnown RBP15.02□□□□□ -0.01
HOXC4-202ENST00000430889 FAM81BQ96LP2 452 aa15.02□□□□□ -0.01
HOXC4-202ENST00000430889 RPS6KC1Q96S38 1066 aa15.02□□□□□ -0.01
HOXC4-202ENST00000430889 ASCC2Q9H1I8 757 aaPredicted RBP15.02□□□□□ -0.01
HOXC4-202ENST00000430889 PPME1Q9Y570 386 aa15.02□□□□□ -0.01
HOXC4-202ENST00000430889 PTPRJQ12913 1337 aa15.02□□□□□ -0.01
HOXC4-202ENST00000430889 DNAJC25-GNG10A0A024R161 153 aa15.01□□□□□ -0.01
HOXC4-202ENST00000430889 A0A0B4J269 797 aa15.01□□□□□ -0.01
HOXC4-202ENST00000430889 MIF4GDA9UHW6 222 aaKnown RBP15.01□□□□□ -0.01
HOXC4-202ENST00000430889 KRIT1O00522 736 aa15.01□□□□□ -0.01
HOXC4-202ENST00000430889 VNN1O95497 513 aa15.01□□□□□ -0.01
HOXC4-202ENST00000430889 DLATP10515 647 aaKnown RBP15.01□□□□□ -0.01
HOXC4-202ENST00000430889 ANK1P16157 1881 aa15.01□□□□□ -0.01
HOXC4-202ENST00000430889 IREB2P48200 963 aaKnown RBP15.01□□□□□ -0.01
HOXC4-202ENST00000430889 TAF3Q5VWG9 929 aa15.01□□□□□ -0.01
HOXC4-202ENST00000430889 TDRD10Q5VZ19 366 aaKnown RBP15.01□□□□□ -0.01
HOXC4-202ENST00000430889 METTL7BQ6UX53 244 aa15.01□□□□□ -0.01
HOXC4-202ENST00000430889 GADL1Q6ZQY3 521 aa15.01□□□□□ -0.01
HOXC4-202ENST00000430889 ERO1BQ86YB8 467 aa15.01□□□□□ -0.01
HOXC4-202ENST00000430889 SULF1Q8IWU6 871 aa15.01□□□□□ -0.01
HOXC4-202ENST00000430889 MORC4Q8TE76 937 aa15.01□□□□□ -0.01
HOXC4-202ENST00000430889 ZBTB9Q96C00 473 aa15.01□□□□□ -0.01
HOXC4-202ENST00000430889 BICD1Q96G01 975 aa15.01□□□□□ -0.01
HOXC4-202ENST00000430889 CLMNQ96JQ2 1002 aa15.01□□□□□ -0.01
HOXC4-202ENST00000430889 FAM84AQ96KN4 292 aa15.01□□□□□ -0.01
HOXC4-202ENST00000430889 DDX47Q9H0S4 455 aaKnown RBP15.01□□□□□ -0.01
HOXC4-202ENST00000430889 TAF1DQ9H5J8 278 aaPredicted RBP15.01□□□□□ -0.01
HOXC4-202ENST00000430889 ELP3Q9H9T3 547 aa15.01□□□□□ -0.01
HOXC4-202ENST00000430889 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.01□□□□□ -0.01
HOXC4-202ENST00000430889 GTF3C4Q9UKN8 822 aa15.01□□□□□ -0.01
HOXC4-202ENST00000430889 AGO2Q9UKV8 859 aaKnown RBP15.01□□□□□ -0.01
HOXC4-202ENST00000430889 NR2E1Q9Y466 385 aa15.01□□□□□ -0.01
HOXC4-202ENST00000430889 CNTNAP2Q9UHC6 1331 aa15.01□□□□□ -0.01
HOXC4-202ENST00000430889 ZSWIM8A7E2V4 1837 aa15.01□□□□□ -0.01
HOXC4-202ENST00000430889 PHACTR2O75167 634 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 MAFO75444 373 aaPredicted RBP15□□□□□ -0.01
HOXC4-202ENST00000430889 LGR5O75473 907 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 ARIH2O95376 493 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 HSPA9P38646 679 aaKnown RBP15□□□□□ -0.01
HOXC4-202ENST00000430889 USP8P40818 1118 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 PEX5P50542 639 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 STRN3Q13033 797 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 CUL1Q13616 776 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 CAPSQ13938 189 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 CLEC16AQ2KHT3 1053 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 SLFN12LQ6IEE8 588 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 SLC7A3Q8WY07 619 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 ZBTB45Q96K62 511 aaPredicted RBP15□□□□□ -0.01
HOXC4-202ENST00000430889 RNPC3Q96LT9 517 aaKnown RBP15□□□□□ -0.01
HOXC4-202ENST00000430889 ZSWIM1Q9BR11 485 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 PI4K2AQ9BTU6 479 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 CCDC113Q9H0I3 377 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 FAM204AQ9H8W3 233 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 TXNRD2Q9NNW7 524 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 CTTNBP2NLQ9P2B4 639 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 AGTPBP1Q9UPW5 1226 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 DCAF8L1A6NGE4 600 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 ZBTB42B2RXF5 422 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 ADCY3O60266 1144 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 FAM189A1O60320 539 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 SLC25A27O95847 323 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms