RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 KAT5Q92993 513 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 TBC1D31Q96DN5 1066 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 LXNQ9BS40 222 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 ZNF577Q9BSK1 485 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 NUP85Q9BW27 656 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 WDR11Q9BZH6 1224 aa16.11■□□□□ 0.17
LINC00839-202ENST00000429940 CFAP73A6NFT4 308 aa16.1■□□□□ 0.17
LINC00839-202ENST00000429940 P4HA2O15460 535 aa16.1■□□□□ 0.17
LINC00839-202ENST00000429940 SNX3O60493 162 aa16.1■□□□□ 0.17
LINC00839-202ENST00000429940 LRRC14Q15048 493 aa16.1■□□□□ 0.17
LINC00839-202ENST00000429940 MAEAQ7L5Y9 396 aa16.1■□□□□ 0.17
LINC00839-202ENST00000429940 DAW1Q8N136 415 aa16.1■□□□□ 0.17
LINC00839-202ENST00000429940 MGARPQ8TDB4 240 aa16.1■□□□□ 0.17
LINC00839-202ENST00000429940 DDX23Q9BUQ8 820 aaKnown RBP16.1■□□□□ 0.17
LINC00839-202ENST00000429940 CDC42EP4Q9H3Q1 356 aaKnown RBP16.1■□□□□ 0.17
LINC00839-202ENST00000429940 ATP6V0A4Q9HBG4 840 aa16.1■□□□□ 0.17
LINC00839-202ENST00000429940 VEZTQ9HBM0 779 aa16.1■□□□□ 0.17
LINC00839-202ENST00000429940 NOCTQ9UK39 431 aaKnown RBP16.1■□□□□ 0.17
LINC00839-202ENST00000429940 GH2P01242 217 aa16.1■□□□□ 0.17
LINC00839-202ENST00000429940 GZMAP12544 262 aa16.1■□□□□ 0.17
LINC00839-202ENST00000429940 STRIP1Q5VSL9 837 aa16.1■□□□□ 0.17
LINC00839-202ENST00000429940 MIGA2Q7L4E1 593 aa16.1■□□□□ 0.17
LINC00839-202ENST00000429940 PNMA8AQ86V59 439 aaPredicted RBP16.1■□□□□ 0.17
LINC00839-202ENST00000429940 C12orf50Q8NA57 414 aaPredicted RBP16.1■□□□□ 0.17
LINC00839-202ENST00000429940 POP1Q99575 1024 aaKnown RBP16.1■□□□□ 0.17
LINC00839-202ENST00000429940 IDI2Q9BXS1 227 aa16.1■□□□□ 0.17
LINC00839-202ENST00000429940 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.1■□□□□ 0.17
LINC00839-202ENST00000429940 AGAP1Q9UPQ3 857 aa16.1■□□□□ 0.17
LINC00839-202ENST00000429940 FER1L6Q2WGJ9 1857 aa16.09■□□□□ 0.17
LINC00839-202ENST00000429940 ACSL3O95573 720 aa16.09■□□□□ 0.17
LINC00839-202ENST00000429940 OAS1P00973 400 aaKnown RBP16.09■□□□□ 0.17
LINC00839-202ENST00000429940 POLR2MP0CAP2 368 aa16.09■□□□□ 0.17
LINC00839-202ENST00000429940 DLATP10515 647 aaKnown RBP16.09■□□□□ 0.17
LINC00839-202ENST00000429940 RWDD2BP57060 319 aa16.09■□□□□ 0.17
LINC00839-202ENST00000429940 JAG1P78504 1218 aa16.09■□□□□ 0.17
LINC00839-202ENST00000429940 CEP55Q53EZ4 464 aa16.09■□□□□ 0.17
LINC00839-202ENST00000429940 ARHGEF2Q92974 986 aaKnown RBP16.09■□□□□ 0.17
LINC00839-202ENST00000429940 TMEM206Q9H813 350 aa16.09■□□□□ 0.17
LINC00839-202ENST00000429940 USP15Q9Y4E8 981 aaPredicted RBP16.09■□□□□ 0.17
LINC00839-202ENST00000429940 TCP11X1B4DZS4 312 aa16.08■□□□□ 0.17
LINC00839-202ENST00000429940 UBOX5O94941 541 aa16.08■□□□□ 0.17
LINC00839-202ENST00000429940 CYP1A2P05177 515 aa16.08■□□□□ 0.17
LINC00839-202ENST00000429940 ARP10275 920 aa16.08■□□□□ 0.17
LINC00839-202ENST00000429940 STAT2P52630 851 aa16.08■□□□□ 0.17
LINC00839-202ENST00000429940 MKRN4PQ13434 485 aaPredicted RBP16.08■□□□□ 0.17
LINC00839-202ENST00000429940 RASA3Q14644 834 aa16.08■□□□□ 0.17
LINC00839-202ENST00000429940 ZNF568Q3ZCX4 644 aa16.08■□□□□ 0.17
LINC00839-202ENST00000429940 C1orf220Q5T0J3 134 aa16.08■□□□□ 0.17
LINC00839-202ENST00000429940 RBM26Q5T8P6 1007 aaKnown RBP16.08■□□□□ 0.17
LINC00839-202ENST00000429940 SLC47A2Q86VL8 602 aa16.08■□□□□ 0.17
LINC00839-202ENST00000429940 FAM71AQ8IYT1 594 aa16.08■□□□□ 0.17
LINC00839-202ENST00000429940 ZNF653Q96CK0 615 aa16.08■□□□□ 0.17
LINC00839-202ENST00000429940 CBWD1Q9BRT8 395 aa16.08■□□□□ 0.17
LINC00839-202ENST00000429940 SYT17Q9BSW7 474 aa16.08■□□□□ 0.17
LINC00839-202ENST00000429940 TEKT3Q9BXF9 490 aa16.08■□□□□ 0.17
LINC00839-202ENST00000429940 LRRC19Q9H756 370 aa16.08■□□□□ 0.17
LINC00839-202ENST00000429940 ACP6Q9NPH0 428 aa16.08■□□□□ 0.17
LINC00839-202ENST00000429940 FGFR1OP2Q9NVK5 253 aa16.08■□□□□ 0.17
LINC00839-202ENST00000429940 GGT7Q9UJ14 662 aa16.08■□□□□ 0.17
LINC00839-202ENST00000429940 SMCHD1A6NHR9 2005 aa16.08■□□□□ 0.17
LINC00839-202ENST00000429940 A0A1W2PRG0 241 aa16.08■□□□□ 0.16
LINC00839-202ENST00000429940 TMEM120BA0PK00 339 aa16.08■□□□□ 0.16
LINC00839-202ENST00000429940 TULP1O00294 542 aaPredicted RBP16.08■□□□□ 0.16
LINC00839-202ENST00000429940 CYP26A1O43174 497 aa16.08■□□□□ 0.16
LINC00839-202ENST00000429940 KRT17Q04695 432 aa16.08■□□□□ 0.16
LINC00839-202ENST00000429940 TRAF1Q13077 416 aa16.08■□□□□ 0.16
LINC00839-202ENST00000429940 RIPK1Q13546 671 aa16.08■□□□□ 0.16
LINC00839-202ENST00000429940 LLGL1Q15334 1064 aa16.08■□□□□ 0.16
LINC00839-202ENST00000429940 PADI6Q6TGC4 694 aa16.08■□□□□ 0.16
LINC00839-202ENST00000429940 SERPINB12Q96P63 405 aa16.08■□□□□ 0.16
LINC00839-202ENST00000429940 WHRNQ9P202 907 aa16.08■□□□□ 0.16
LINC00839-202ENST00000429940 LARSQ9P2J5 1176 aaKnown RBP16.08■□□□□ 0.16
LINC00839-202ENST00000429940 ZNF646O15015 1829 aaPredicted RBP16.08■□□□□ 0.16
LINC00839-202ENST00000429940 CLDN3O15551 220 aa16.07■□□□□ 0.16
LINC00839-202ENST00000429940 ATP5DP30049 168 aa16.07■□□□□ 0.16
LINC00839-202ENST00000429940 MXI1P50539 228 aa16.07■□□□□ 0.16
LINC00839-202ENST00000429940 RRP1BQ14684 758 aaKnown RBP16.07■□□□□ 0.16
LINC00839-202ENST00000429940 CCDC174Q6PII3 467 aa16.07■□□□□ 0.16
LINC00839-202ENST00000429940 CRELD2Q6UXH1 353 aaPredicted RBP16.07■□□□□ 0.16
LINC00839-202ENST00000429940 PPM1KQ8N3J5 372 aa16.07■□□□□ 0.16
LINC00839-202ENST00000429940 XXYLT1Q8NBI6 393 aa16.07■□□□□ 0.16
LINC00839-202ENST00000429940 C1orf54Q8WWF1 131 aa16.07■□□□□ 0.16
LINC00839-202ENST00000429940 ACCSQ96QU6 501 aa16.07■□□□□ 0.16
LINC00839-202ENST00000429940 EHMT1Q9H9B1 1298 aa16.07■□□□□ 0.16
LINC00839-202ENST00000429940 AAASQ9NRG9 546 aa16.07■□□□□ 0.16
LINC00839-202ENST00000429940 HSPBP1Q9NZL4 362 aa16.07■□□□□ 0.16
LINC00839-202ENST00000429940 ASIC3Q9UHC3 531 aa16.07■□□□□ 0.16
LINC00839-202ENST00000429940 DDX39AO00148 427 aaKnown RBP16.07■□□□□ 0.16
LINC00839-202ENST00000429940 SUN1O94901 812 aa16.07■□□□□ 0.16
LINC00839-202ENST00000429940 CREB1P16220 341 aa16.07■□□□□ 0.16
LINC00839-202ENST00000429940 FMO1Q01740 532 aa16.07■□□□□ 0.16
LINC00839-202ENST00000429940 SNX1Q13596 522 aa16.07■□□□□ 0.16
LINC00839-202ENST00000429940 SGO2Q562F6 1265 aa16.07■□□□□ 0.16
LINC00839-202ENST00000429940 NSMFQ6X4W1 530 aa16.07■□□□□ 0.16
LINC00839-202ENST00000429940 ZSWIM2Q8NEG5 633 aa16.07■□□□□ 0.16
LINC00839-202ENST00000429940 PLEKHO2Q8TD55 490 aa16.07■□□□□ 0.16
LINC00839-202ENST00000429940 SLCO2A1Q92959 643 aa16.07■□□□□ 0.16
LINC00839-202ENST00000429940 KREMEN1Q96MU8 473 aa16.07■□□□□ 0.16
LINC00839-202ENST00000429940 TMEM117Q9H0C3 514 aa16.07■□□□□ 0.16
LINC00839-202ENST00000429940 ECT2Q9H8V3 914 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms