RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 ZSWIM5Q9P217 1185 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 G3BP2Q9UN86 482 aaKnown RBP7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 ARFGEF2Q9Y6D5 1785 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 F8W031 263 aaPredicted RBP7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 H7C0S8 307 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 PHKG2P15735 406 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 ABCB4P21439 1286 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 POLR2FP61218 127 aaKnown RBP7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 ELF3P78545 371 aaPredicted RBP7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 KRT31Q15323 416 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 C19orf60Q96EN9 201 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 CAPN11Q9UMQ6 739 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 PCDHA13Q9Y5I0 950 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 WNT7AO00755 349 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 CNOT3O75175 753 aaKnown RBP7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 EYA4O95677 639 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 GSNP06396 782 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 IGBP1P78318 339 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 PPIDQ08752 370 aaKnown RBP7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 KLHL12Q53G59 568 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 FAM47AQ5JRC9 791 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 C16orf89Q6UX73 402 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 PRUNE1Q86TP1 453 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 CCDC125Q86Z20 511 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 PUS7LQ9H0K6 701 aaKnown RBP7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 ASCC2Q9H1I8 757 aaPredicted RBP7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 STX18Q9P2W9 335 aaKnown RBP7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 IPPQ9Y573 584 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 GIPC1O14908 333 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 ZNF354CQ86Y25 554 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 RNF169Q8NCN4 708 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 VPS37AQ8NEZ2 397 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 GPAMQ9HCL2 828 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 CD248Q9HCU0 757 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 ERVV-2B6SEH9 535 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 PTPROQ16827 1216 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 NUP93Q8N1F7 819 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 PAGE5Q96GU1 130 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 PTPN22Q9Y2R2 807 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 MAD1L1Q9Y6D9 718 aa7.96□□□□□ -1.14
SYNPO2-202ENST00000429713 PORP16435 677 aaPredicted RBP7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 PGM1P36871 562 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 LPIN1Q14693 890 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 EPM2AIP1Q7L775 607 aaPredicted RBP7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 AFF2P51816 1311 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 GOLGA8IPA6NC78 632 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 H2AFYO75367 372 aaKnown RBP7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 MOCS3O95396 460 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 NTRK1P04629 796 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 CAPN1P07384 714 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 ADCY1Q08828 1119 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 MYCT1Q8N699 235 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 SMYD1Q8NB12 490 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 NEDD1Q8NHV4 660 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 OSBP2Q969R2 916 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 WDR35Q9P2L0 1181 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 VPS41P49754 854 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 NPEPPSP55786 919 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 PABPC4Q13310 644 aaKnown RBP eCLIP7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 CYFIP1Q7L576 1253 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 PCDHB6Q9Y5E3 794 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 NR2E3Q9Y5X4 410 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 PDE8BO95263 885 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 BAG2O95816 211 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 TCIRG1Q13488 830 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 PLS1Q14651 629 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 DIXDC1Q155Q3 683 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 FOXR2Q6PJQ5 311 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 LRRC74BQ6ZQY2 392 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 NEK8Q86SG6 692 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 CDKL2Q92772 493 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 ERLEC1Q96DZ1 483 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 DNAJC7Q99615 494 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 DCLK3Q9C098 648 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 GTF3C4Q9UKN8 822 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 OVOS2A0A0G2JMS6 1433 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 TJP3O95049 919 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 OCM2P0CE71 109 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 OCMP0CE72 109 aaPredicted RBP7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 CDC27P30260 824 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 HIBADHP31937 336 aaKnown RBP7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 MTBPQ96DY7 904 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 GJB4Q9NTQ9 266 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 SETD1AO15047 1707 aaKnown RBP7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 DIP2CQ9Y2E4 1556 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 SLC15A2Q16348 729 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 AAGABQ6PD74 315 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 BLOC1S5Q8TDH9 187 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 GPKOWQ92917 476 aaPredicted RBP eCLIP7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 NSL1Q96IY1 281 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 RILPQ96NA2 401 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 TBK1Q9UHD2 729 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 ROBO2Q9HCK4 1378 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 TM9SF1O15321 606 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 SRGAP2O75044 1071 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 FKBP3Q00688 224 aaKnown RBP7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 FLOT2Q14254 428 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 WDR44Q5JSH3 913 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 TPTE2Q6XPS3 522 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms