RNA–Protein interactions for RNA: ENST00000428966.1

PABPC1P11-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 11, humanhuman

BASIC

Gene PABPC1P11, Length 2,007 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11-201ENST00000428966 CNNM3Q8NE01 707 aa12.71□□□□□ -0.38
PABPC1P11-201ENST00000428966 SPIRE2Q8WWL2 714 aa12.71□□□□□ -0.38
PABPC1P11-201ENST00000428966 ARNTL2Q8WYA1 636 aa12.71□□□□□ -0.38
PABPC1P11-201ENST00000428966 DDX12PQ92771 950 aa12.71□□□□□ -0.38
PABPC1P11-201ENST00000428966 DHX58Q96C10 678 aa12.71□□□□□ -0.38
PABPC1P11-201ENST00000428966 DNAJC19Q96DA6 116 aa12.71□□□□□ -0.38
PABPC1P11-201ENST00000428966 LARSQ9P2J5 1176 aaKnown RBP12.71□□□□□ -0.38
PABPC1P11-201ENST00000428966 KCNH3Q9ULD8 1083 aa12.71□□□□□ -0.38
PABPC1P11-201ENST00000428966 HES2Q9Y543 173 aa12.71□□□□□ -0.38
PABPC1P11-201ENST00000428966 K7ERI5 159 aa12.7□□□□□ -0.38
PABPC1P11-201ENST00000428966 RFXAPO00287 272 aa12.7□□□□□ -0.38
PABPC1P11-201ENST00000428966 EOMESO95936 686 aa12.7□□□□□ -0.38
PABPC1P11-201ENST00000428966 KRT18P05783 430 aaKnown RBP12.7□□□□□ -0.38
PABPC1P11-201ENST00000428966 PRPF4BQ13523 1007 aaKnown RBP12.7□□□□□ -0.38
PABPC1P11-201ENST00000428966 FIBCD1Q8N539 461 aa12.7□□□□□ -0.38
PABPC1P11-201ENST00000428966 SMG8Q8ND04 991 aaKnown RBP12.7□□□□□ -0.38
PABPC1P11-201ENST00000428966 CASD1Q96PB1 797 aa12.7□□□□□ -0.38
PABPC1P11-201ENST00000428966 FIZ1Q96SL8 496 aa12.7□□□□□ -0.38
PABPC1P11-201ENST00000428966 PARVGQ9HBI0 331 aa12.7□□□□□ -0.38
PABPC1P11-201ENST00000428966 KBTBD4Q9NVX7 518 aa12.7□□□□□ -0.38
PABPC1P11-201ENST00000428966 MRPL42Q9Y6G3 142 aaKnown RBP12.7□□□□□ -0.38
PABPC1P11-201ENST00000428966 A0A0C4DFX4 3053 aa12.7□□□□□ -0.38
PABPC1P11-201ENST00000428966 TBKBP1A7MCY6 615 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 KIF20AO95235 890 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 RAB27AP51159 221 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 ERVK-21P61565 698 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 GABPB1Q06547 395 aaPredicted RBP12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 NT5DC1Q5TFE4 455 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 KANK3Q6NY19 840 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 SLC27A1Q6PCB7 646 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 AGMOQ6ZNB7 445 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 CMTR2Q8IYT2 770 aaKnown RBP12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 IQUBQ8NA54 791 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 MYLIPQ8WY64 445 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 CLP1Q92989 425 aaKnown RBP12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 TGS1Q96RS0 853 aaKnown RBP12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 SRRTQ9BXP5 876 aaKnown RBP12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 ZHX3Q9H4I2 956 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 PDZD7Q9H5P4 517 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 IPPQ9Y573 584 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 PHLPP2Q6ZVD8 1323 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 ZSCAN12O43309 604 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 FAM13AO94988 1023 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 MAPTP10636 758 aaKnown RBP12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 AFF1P51825 1210 aaKnown RBP12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 SMTNP53814 917 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 NCKAP1LP55160 1127 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 ADGRE1Q14246 886 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 EPC2Q52LR7 807 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 EEF1DP3Q658K8 133 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 LRRC55Q6ZSA7 311 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 MRPL10Q7Z7H8 261 aaKnown RBP12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 VSTM4Q8IW00 320 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 MYCT1Q8N699 235 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 HELQQ8TDG4 1101 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 CCDC51Q96ER9 411 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 CCDC34Q96HJ3 373 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 NXF3Q9H4D5 531 aaKnown RBP12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 TMEM134Q9H6X4 195 aa12.69□□□□□ -0.38
PABPC1P11-201ENST00000428966 GOLGA6L9A6NEM1 432 aa12.68□□□□□ -0.38
PABPC1P11-201ENST00000428966 TBCAO75347 108 aaKnown RBP12.68□□□□□ -0.38
PABPC1P11-201ENST00000428966 PNOCQ13519 176 aa12.68□□□□□ -0.38
PABPC1P11-201ENST00000428966 HAUS6Q7Z4H7 955 aa12.68□□□□□ -0.38
PABPC1P11-201ENST00000428966 TRIML1Q8N9V2 468 aa12.68□□□□□ -0.38
PABPC1P11-201ENST00000428966 TMEM117Q9H0C3 514 aa12.68□□□□□ -0.38
PABPC1P11-201ENST00000428966 HSD3B7Q9H2F3 369 aa12.68□□□□□ -0.38
PABPC1P11-201ENST00000428966 CUEDC2Q9H467 287 aa12.68□□□□□ -0.38
PABPC1P11-201ENST00000428966 TYW1Q9NV66 732 aaKnown RBP12.68□□□□□ -0.38
PABPC1P11-201ENST00000428966 HOXA2O43364 376 aa12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 LPXNO60711 386 aa12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 NPTXRO95502 500 aa12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 SKIP12755 728 aa12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 ETF1P62495 437 aaKnown RBP12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 NAA30Q147X3 362 aaPredicted RBP12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 ATF7IP2Q5U623 682 aa12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 SYT10Q6XYQ8 523 aa12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 SFR1Q86XK3 245 aa12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 TMEM192Q8IY95 271 aa12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 ABI1Q8IZP0 508 aa12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 KRT222Q8N1A0 295 aa12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 MLKLQ8NB16 471 aa12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 GDPD5Q8WTR4 605 aa12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 TARS2Q9BW92 718 aaKnown RBP12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 TRIM9Q9C026 710 aa12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 TRIM6Q9C030 488 aaPredicted RBP12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 FRMD3A2A2Y4 597 aa12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 ACTN4O43707 911 aaKnown RBP12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 CASP1P29466 404 aa12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 NMT1P30419 496 aaKnown RBP12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 BMPR1AP36894 532 aa12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 KMT5BQ4FZB7 885 aa12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 CT47A1Q5JQC4 288 aaPredicted RBP12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 ISM2Q6H9L7 571 aa12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 FAM178BQ8IXR5 827 aa12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 KCNN1Q92952 543 aa12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 ACO2Q99798 780 aaKnown RBP12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 CWH43Q9H720 699 aa12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 PTPRHQ9HD43 1115 aa12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 KCNG1Q9UIX4 513 aa12.67□□□□□ -0.38
PABPC1P11-201ENST00000428966 PCDHA5Q9Y5H7 936 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms