RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 DBF4BQ8NFT6 615 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 APBB2Q92870 758 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 CCDC127Q96BQ5 260 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 FAM212AQ96EL1 285 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 ADAM2Q99965 735 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 MKNK1Q9BUB5 465 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 HSD3B7Q9H2F3 369 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 TMX1Q9H3N1 280 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 GRPEL1Q9HAV7 217 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 METTL14Q9HCE5 456 aaKnown RBP8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 FAM105AQ9NUU6 356 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 PCDH10Q9P2E7 1040 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 ZMYND8Q9ULU4 1186 aaPredicted RBP8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 PCDHB2Q9Y5E7 798 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 SIP14410 1827 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 FSD2A1L4K1 749 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 MAPK13O15264 365 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 FAM189A1O60320 539 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 MGEA5O60502 916 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 RECQL4O94761 1208 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 CXCL10P02778 98 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 TRIM49P0CI25 452 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 TRIM49CP0CI26 452 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 STAG3L1P0CL83 205 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 CXCL8P10145 99 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 DLATP10515 647 aaKnown RBP8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 SKIP12755 728 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 CSF2RAP15509 400 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 SYN1P17600 705 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 TNFSF9P41273 254 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 VAMP7P51809 220 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 YARSP54577 528 aaKnown RBP8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 PPP2R3AQ06190 1150 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 CYP24A1Q07973 514 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 BFSP1Q12934 665 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 DSC3Q14574 896 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 GPNMBQ14956 572 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 KRT31Q15323 416 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 MAN2A1Q16706 1144 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 UBXN11Q5T124 520 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 MFSD5Q6N075 450 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 FRMD5Q7Z6J6 570 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 BRSK2Q8IWQ3 736 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 TMEM192Q8IY95 271 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 TMEM174Q8WUU8 243 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 LINC01599Q8WXQ3 324 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 DPF3Q92784 378 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 FBXL18Q96ME1 805 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 ACAP3Q96P50 834 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 FNBP1Q96RU3 617 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 TUBGCP2Q9BSJ2 902 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 FTHL17Q9BXU8 183 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 MMRN2Q9H8L6 949 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 RPF1Q9H9Y2 349 aaKnown RBP8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 TOPORSQ9NS56 1045 aaPredicted RBP8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 SNTG2Q9NY99 539 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 PARP2Q9UGN5 583 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 CPSF3Q9UKF6 684 aaKnown RBP8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 HES2Q9Y543 173 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 IPPQ9Y573 584 aa8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.6□□□□□ -1.03
HMGA1P4-201ENST00000428643 LGALS16A8MUM7 142 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 STX10O60499 249 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 IL18RAPO95256 599 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 TPM3P06753 285 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 PFKMP08237 780 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 ITGA4P13612 1032 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 AKAP5P24588 427 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 ITGB8P26012 769 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 COPB1P53618 953 aaKnown RBP8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 FANCCQ00597 558 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 FPGSQ05932 587 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 PPIGQ13427 754 aaKnown RBP eCLIP8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 PSMD6Q15008 389 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 ENOX2Q16206 610 aaKnown RBP8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 UVSSAQ2YD98 709 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 FILIP1LQ4L180 1135 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 FKBP15Q5T1M5 1219 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 CNKSR3Q6P9H4 555 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 CRELD2Q6UXH1 353 aaPredicted RBP8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 SLC24A5Q71RS6 500 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 ECHDC2Q86YB7 292 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 TRIM59Q8IWR1 403 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 RPUSD2Q8IZ73 545 aaKnown RBP8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 SMG8Q8ND04 991 aaKnown RBP8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 BADQ92934 168 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 LPPQ93052 612 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 SNX27Q96L92 541 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 LBHD1Q9BQE6 289 aaPredicted RBP8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 VPS16Q9H269 839 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 TSPYL2Q9H2G4 693 aaPredicted RBP8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 PDE11AQ9HCR9 933 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 RGS18Q9NS28 235 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 C1orf112Q9NSG2 853 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 IFNKQ9P0W0 207 aa8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 LIMA1Q9UHB6 759 aaKnown RBP8.59□□□□□ -1.03
HMGA1P4-201ENST00000428643 TANC1Q9C0D5 1861 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 A0A0U1RQF3 1178 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 LRRIQ3A6PVS8 624 aaPredicted RBP8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 CBFA2T2O43439 604 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms