RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 MAN1C1Q9NR34 630 aa17.05■□□□□ 0.32
CTDSP1-202ENST00000428361 CHST7Q9NS84 486 aa17.05■□□□□ 0.32
CTDSP1-202ENST00000428361 DDX19AQ9NUU7 478 aaKnown RBP17.05■□□□□ 0.32
CTDSP1-202ENST00000428361 MIOSQ9NXC5 875 aa17.05■□□□□ 0.32
CTDSP1-202ENST00000428361 FNIP2Q9P278 1114 aa17.05■□□□□ 0.32
CTDSP1-202ENST00000428361 ZNF318Q5VUA4 2279 aa17.04■□□□□ 0.32
CTDSP1-202ENST00000428361 H3BQV1 296 aa17.04■□□□□ 0.32
CTDSP1-202ENST00000428361 TEX28O15482 410 aa17.04■□□□□ 0.32
CTDSP1-202ENST00000428361 PTPN5P54829 565 aa17.04■□□□□ 0.32
CTDSP1-202ENST00000428361 KIAA0319Q5VV43 1072 aa17.04■□□□□ 0.32
CTDSP1-202ENST00000428361 MCTP1Q6DN14 999 aa17.04■□□□□ 0.32
CTDSP1-202ENST00000428361 CDR2LQ86X02 465 aaPredicted RBP17.04■□□□□ 0.32
CTDSP1-202ENST00000428361 C4orf32Q8N8J7 132 aa17.04■□□□□ 0.32
CTDSP1-202ENST00000428361 CCDC113Q9H0I3 377 aa17.04■□□□□ 0.32
CTDSP1-202ENST00000428361 KLK14Q9P0G3 267 aa17.04■□□□□ 0.32
CTDSP1-202ENST00000428361 RBM19Q9Y4C8 960 aaKnown RBP17.04■□□□□ 0.32
CTDSP1-202ENST00000428361 PIEZO1Q92508 2521 aa17.04■□□□□ 0.32
CTDSP1-202ENST00000428361 K7ERI5 159 aa17.03■□□□□ 0.32
CTDSP1-202ENST00000428361 RECQL4O94761 1208 aa17.03■□□□□ 0.32
CTDSP1-202ENST00000428361 EFEMP2O95967 443 aa17.03■□□□□ 0.32
CTDSP1-202ENST00000428361 LIG1P18858 919 aa17.03■□□□□ 0.32
CTDSP1-202ENST00000428361 ATF7IP2Q5U623 682 aa17.03■□□□□ 0.32
CTDSP1-202ENST00000428361 GSTCDQ8NEC7 633 aa17.03■□□□□ 0.32
CTDSP1-202ENST00000428361 BSNDQ8WZ55 320 aa17.03■□□□□ 0.32
CTDSP1-202ENST00000428361 NT5C3AQ9H0P0 336 aa17.03■□□□□ 0.32
CTDSP1-202ENST00000428361 TOPORSQ9NS56 1045 aaPredicted RBP17.03■□□□□ 0.32
CTDSP1-202ENST00000428361 ZDHHC7Q9NXF8 308 aa17.03■□□□□ 0.32
CTDSP1-202ENST00000428361 SNTG2Q9NY99 539 aa17.03■□□□□ 0.32
CTDSP1-202ENST00000428361 PCDHB6Q9Y5E3 794 aa17.03■□□□□ 0.32
CTDSP1-202ENST00000428361 WEE2P0C1S8 567 aa17.02■□□□□ 0.32
CTDSP1-202ENST00000428361 YARSP54577 528 aaKnown RBP17.02■□□□□ 0.32
CTDSP1-202ENST00000428361 RIN2Q8WYP3 895 aaPredicted RBP17.02■□□□□ 0.32
CTDSP1-202ENST00000428361 ASIC4Q96FT7 647 aa17.02■□□□□ 0.32
CTDSP1-202ENST00000428361 UROC1Q96N76 676 aa17.02■□□□□ 0.32
CTDSP1-202ENST00000428361 TMEM134Q9H6X4 195 aa17.02■□□□□ 0.32
CTDSP1-202ENST00000428361 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.02■□□□□ 0.32
CTDSP1-202ENST00000428361 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.02■□□□□ 0.32
CTDSP1-202ENST00000428361 ZDBF2Q9HCK1 2354 aa17.01■□□□□ 0.31
CTDSP1-202ENST00000428361 CCDC195A0A1B0GUA6 201 aa17.01■□□□□ 0.31
CTDSP1-202ENST00000428361 CCDC169A6NNP5 214 aa17.01■□□□□ 0.31
CTDSP1-202ENST00000428361 SLC26A4O43511 780 aa17.01■□□□□ 0.31
CTDSP1-202ENST00000428361 TOB1P50616 345 aaPredicted RBP17.01■□□□□ 0.31
CTDSP1-202ENST00000428361 NBR1Q14596 966 aa17.01■□□□□ 0.31
CTDSP1-202ENST00000428361 ARL6IP4Q66PJ3 421 aaKnown RBP17.01■□□□□ 0.31
CTDSP1-202ENST00000428361 TAS1R1Q7RTX1 841 aa17.01■□□□□ 0.31
CTDSP1-202ENST00000428361 CDK5RAP3Q96JB5 506 aa17.01■□□□□ 0.31
CTDSP1-202ENST00000428361 TMX3Q96JJ7 454 aa17.01■□□□□ 0.31
CTDSP1-202ENST00000428361 TTPALQ9BTX7 342 aa17.01■□□□□ 0.31
CTDSP1-202ENST00000428361 CCDC94Q9BW85 323 aaPredicted RBP17.01■□□□□ 0.31
CTDSP1-202ENST00000428361 MRPL4Q9BYD3 311 aaKnown RBP17.01■□□□□ 0.31
CTDSP1-202ENST00000428361 GPR62Q9BZJ7 368 aa17.01■□□□□ 0.31
CTDSP1-202ENST00000428361 PIDD1Q9HB75 910 aa17.01■□□□□ 0.31
CTDSP1-202ENST00000428361 KCND2Q9NZV8 630 aa17.01■□□□□ 0.31
CTDSP1-202ENST00000428361 IGSF9Q9P2J2 1179 aa17.01■□□□□ 0.31
CTDSP1-202ENST00000428361 CDH22Q9UJ99 828 aa17.01■□□□□ 0.31
CTDSP1-202ENST00000428361 TNFSF13BQ9Y275 285 aa17.01■□□□□ 0.31
CTDSP1-202ENST00000428361 H0YCG3 227 aa17■□□□□ 0.31
CTDSP1-202ENST00000428361 TRAPPC3O43617 180 aa17■□□□□ 0.31
CTDSP1-202ENST00000428361 SMTNP53814 917 aa17■□□□□ 0.31
CTDSP1-202ENST00000428361 PEX3P56589 373 aa17■□□□□ 0.31
CTDSP1-202ENST00000428361 NHLH1Q02575 133 aa17■□□□□ 0.31
CTDSP1-202ENST00000428361 ECM1Q16610 540 aa17■□□□□ 0.31
CTDSP1-202ENST00000428361 DENND4AQ7Z401 1863 aa17■□□□□ 0.31
CTDSP1-202ENST00000428361 PIK3R5Q8WYR1 880 aa17■□□□□ 0.31
CTDSP1-202ENST00000428361 SMG7Q92540 1137 aaKnown RBP17■□□□□ 0.31
CTDSP1-202ENST00000428361 NXPE3Q969Y0 559 aa17■□□□□ 0.31
CTDSP1-202ENST00000428361 WDR6Q9NNW5 1121 aaKnown RBP17■□□□□ 0.31
CTDSP1-202ENST00000428361 KMT5AQ9NQR1 393 aa17■□□□□ 0.31
CTDSP1-202ENST00000428361 SLC38A7Q9NVC3 462 aa17■□□□□ 0.31
CTDSP1-202ENST00000428361 LIMD1Q9UGP4 676 aa17■□□□□ 0.31
CTDSP1-202ENST00000428361 CLUHO75153 1309 aa16.99■□□□□ 0.31
CTDSP1-202ENST00000428361 CASTOR2A6NHX0 329 aa16.99■□□□□ 0.31
CTDSP1-202ENST00000428361 TMEM189-UBE2V1I3L0A0 370 aa16.99■□□□□ 0.31
CTDSP1-202ENST00000428361 PTGESO14684 152 aa16.99■□□□□ 0.31
CTDSP1-202ENST00000428361 HIP1RO75146 1068 aa16.99■□□□□ 0.31
CTDSP1-202ENST00000428361 PAPLNO95428 1278 aa16.99■□□□□ 0.31
CTDSP1-202ENST00000428361 BMP15O95972 392 aa16.99■□□□□ 0.31
CTDSP1-202ENST00000428361 GUCY2CP25092 1073 aa16.99■□□□□ 0.31
CTDSP1-202ENST00000428361 NPTX2P47972 431 aa16.99■□□□□ 0.31
CTDSP1-202ENST00000428361 ATP2C1P98194 919 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-202ENST00000428361 STRN3Q13033 797 aa16.99■□□□□ 0.31
CTDSP1-202ENST00000428361 ZNF568Q3ZCX4 644 aa16.99■□□□□ 0.31
CTDSP1-202ENST00000428361 LIN9Q5TKA1 542 aa16.99■□□□□ 0.31
CTDSP1-202ENST00000428361 FAM171A1Q5VUB5 890 aa16.99■□□□□ 0.31
CTDSP1-202ENST00000428361 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-202ENST00000428361 RTL10Q7L3V2 364 aa16.99■□□□□ 0.31
CTDSP1-202ENST00000428361 AK8Q96MA6 479 aa16.99■□□□□ 0.31
CTDSP1-202ENST00000428361 KIFC3Q9BVG8 833 aa16.99■□□□□ 0.31
CTDSP1-202ENST00000428361 MFSD1Q9H3U5 465 aa16.99■□□□□ 0.31
CTDSP1-202ENST00000428361 SMC3Q9UQE7 1217 aa16.99■□□□□ 0.31
CTDSP1-202ENST00000428361 GDAQ9Y2T3 454 aa16.99■□□□□ 0.31
CTDSP1-202ENST00000428361 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-202ENST00000428361 TRIOO75962 3097 aa16.98■□□□□ 0.31
CTDSP1-202ENST00000428361 E9PMD0 336 aa16.98■□□□□ 0.31
CTDSP1-202ENST00000428361 TGM5O43548 720 aa16.98■□□□□ 0.31
CTDSP1-202ENST00000428361 KIF4AO95239 1232 aa16.98■□□□□ 0.31
CTDSP1-202ENST00000428361 BRD1O95696 1058 aa16.98■□□□□ 0.31
CTDSP1-202ENST00000428361 SCP2P22307 547 aa16.98■□□□□ 0.31
CTDSP1-202ENST00000428361 GJB2P29033 226 aa16.98■□□□□ 0.31
CTDSP1-202ENST00000428361 AVPR2P30518 371 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms