RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 BICD1Q96G01 975 aa22.68■■□□□ 1.22
HSPG2-205ENST00000427897 NTPCRQ9BSD7 190 aaKnown RBP22.68■■□□□ 1.22
HSPG2-205ENST00000427897 TARS2Q9BW92 718 aaKnown RBP22.68■■□□□ 1.22
HSPG2-205ENST00000427897 C1QTNF1Q9BXJ1 281 aa22.68■■□□□ 1.22
HSPG2-205ENST00000427897 ARHGAP28Q9P2N2 729 aa22.68■■□□□ 1.22
HSPG2-205ENST00000427897 ODF2LQ9ULJ1 636 aa22.68■■□□□ 1.22
HSPG2-205ENST00000427897 MYH11P35749 1972 aa22.68■■□□□ 1.22
HSPG2-205ENST00000427897 EDN1P05305 212 aa22.67■■□□□ 1.22
HSPG2-205ENST00000427897 HARSP12081 509 aaKnown RBP22.67■■□□□ 1.22
HSPG2-205ENST00000427897 OSTNP61366 133 aa22.67■■□□□ 1.22
HSPG2-205ENST00000427897 ZP2Q05996 745 aa22.67■■□□□ 1.22
HSPG2-205ENST00000427897 TUSC3Q13454 348 aa22.67■■□□□ 1.22
HSPG2-205ENST00000427897 MCM6Q14566 821 aa22.67■■□□□ 1.22
HSPG2-205ENST00000427897 RAD54LQ92698 747 aa22.67■■□□□ 1.22
HSPG2-205ENST00000427897 HERC2P3Q9BVR0 1158 aa22.67■■□□□ 1.22
HSPG2-205ENST00000427897 CCSER1Q9C0I3 900 aa22.67■■□□□ 1.22
HSPG2-205ENST00000427897 CD320Q9NPF0 282 aa22.67■■□□□ 1.22
HSPG2-205ENST00000427897 TOPORSQ9NS56 1045 aaPredicted RBP22.67■■□□□ 1.22
HSPG2-205ENST00000427897 SRPRBQ9Y5M8 271 aaKnown RBP22.67■■□□□ 1.22
HSPG2-205ENST00000427897 CASTOR2A6NHX0 329 aa22.66■■□□□ 1.22
HSPG2-205ENST00000427897 TBCAO75347 108 aaKnown RBP22.66■■□□□ 1.22
HSPG2-205ENST00000427897 PDIA4P13667 645 aaKnown RBP22.66■■□□□ 1.22
HSPG2-205ENST00000427897 GLUD2P49448 558 aa22.66■■□□□ 1.22
HSPG2-205ENST00000427897 HSP90AA2PQ14568 343 aaPredicted RBP22.66■■□□□ 1.22
HSPG2-205ENST00000427897 STK38Q15208 465 aa22.66■■□□□ 1.22
HSPG2-205ENST00000427897 PTPAQ15257 358 aa22.66■■□□□ 1.22
HSPG2-205ENST00000427897 PTPN14Q15678 1187 aa22.66■■□□□ 1.22
HSPG2-205ENST00000427897 RRAGBQ5VZM2 374 aa22.66■■□□□ 1.22
HSPG2-205ENST00000427897 ELMSAN1Q6PJG2 1045 aa22.66■■□□□ 1.22
HSPG2-205ENST00000427897 GSTCDQ8NEC7 633 aa22.66■■□□□ 1.22
HSPG2-205ENST00000427897 LARP4BQ92615 738 aaKnown RBP22.66■■□□□ 1.22
HSPG2-205ENST00000427897 RABGGTAQ92696 567 aa22.66■■□□□ 1.22
HSPG2-205ENST00000427897 EPSTI1Q96J88 318 aa22.66■■□□□ 1.22
HSPG2-205ENST00000427897 ZNF396Q96N95 335 aaPredicted RBP22.66■■□□□ 1.22
HSPG2-205ENST00000427897 DZANK1Q9NVP4 752 aa22.66■■□□□ 1.22
HSPG2-205ENST00000427897 MARCH5Q9NX47 278 aa22.66■■□□□ 1.22
HSPG2-205ENST00000427897 ADAM28Q9UKQ2 775 aa22.66■■□□□ 1.22
HSPG2-205ENST00000427897 BRWD1Q9NSI6 2320 aa22.65■■□□□ 1.22
HSPG2-205ENST00000427897 DDIT3P35638 169 aa22.65■■□□□ 1.22
HSPG2-205ENST00000427897 KCNC3Q14003 757 aa22.65■■□□□ 1.22
HSPG2-205ENST00000427897 USP41Q3LFD5 358 aa22.65■■□□□ 1.22
HSPG2-205ENST00000427897 ARSHQ5FYA8 562 aa22.65■■□□□ 1.22
HSPG2-205ENST00000427897 FOXD4L5Q5VV16 416 aaPredicted RBP22.65■■□□□ 1.22
HSPG2-205ENST00000427897 FUT10Q6P4F1 479 aa22.65■■□□□ 1.22
HSPG2-205ENST00000427897 MPZL3Q6UWV2 235 aa22.65■■□□□ 1.22
HSPG2-205ENST00000427897 KRI1Q8N9T8 703 aaKnown RBP22.65■■□□□ 1.22
HSPG2-205ENST00000427897 FOXD4L4Q8WXT5 416 aaPredicted RBP22.65■■□□□ 1.22
HSPG2-205ENST00000427897 ACAP3Q96P50 834 aa22.65■■□□□ 1.22
HSPG2-205ENST00000427897 KLHL5Q96PQ7 755 aa22.65■■□□□ 1.22
HSPG2-205ENST00000427897 REEP2Q9BRK0 252 aa22.65■■□□□ 1.22
HSPG2-205ENST00000427897 VN1R3Q9BXE9 311 aa22.65■■□□□ 1.22
HSPG2-205ENST00000427897 CDT1Q9H211 546 aa22.65■■□□□ 1.22
HSPG2-205ENST00000427897 ANKFY1Q9P2R3 1169 aa22.65■■□□□ 1.22
HSPG2-205ENST00000427897 FBXO2Q9UK22 296 aaPredicted RBP22.65■■□□□ 1.22
HSPG2-205ENST00000427897 ADH1AP07327 375 aa22.64■■□□□ 1.21
HSPG2-205ENST00000427897 CNPP09543 421 aaKnown RBP22.64■■□□□ 1.21
HSPG2-205ENST00000427897 MCF2P10911 925 aa22.64■■□□□ 1.21
HSPG2-205ENST00000427897 ALADP13716 330 aa22.64■■□□□ 1.21
HSPG2-205ENST00000427897 GRM5P41594 1212 aa22.64■■□□□ 1.21
HSPG2-205ENST00000427897 ITIH3Q06033 890 aa22.64■■□□□ 1.21
HSPG2-205ENST00000427897 TAS1R1Q7RTX1 841 aa22.64■■□□□ 1.21
HSPG2-205ENST00000427897 SPRYD3Q8NCJ5 442 aa22.64■■□□□ 1.21
HSPG2-205ENST00000427897 RPGRIP1Q96KN7 1286 aa22.64■■□□□ 1.21
HSPG2-205ENST00000427897 CLIC6Q96NY7 704 aa22.64■■□□□ 1.21
HSPG2-205ENST00000427897 USP28Q96RU2 1077 aa22.64■■□□□ 1.21
HSPG2-205ENST00000427897 PHF7Q9BWX1 381 aaPredicted RBP22.64■■□□□ 1.21
HSPG2-205ENST00000427897 EPHX3Q9H6B9 360 aa22.64■■□□□ 1.21
HSPG2-205ENST00000427897 PARVGQ9HBI0 331 aa22.64■■□□□ 1.21
HSPG2-205ENST00000427897 BLOC1S4Q9NUP1 217 aa22.64■■□□□ 1.21
HSPG2-205ENST00000427897 SPTBN5Q9NRC6 3674 aaKnown RBP22.64■■□□□ 1.21
HSPG2-205ENST00000427897 SF3B1O75533 1304 aaKnown RBP eCLIP22.63■■□□□ 1.214e-7■■■■■ 86.2
HSPG2-205ENST00000427897 PTGESO14684 152 aa22.63■■□□□ 1.21
HSPG2-205ENST00000427897 CLDN3O15551 220 aa22.63■■□□□ 1.21
HSPG2-205ENST00000427897 MAPTP10636 758 aaKnown RBP22.63■■□□□ 1.21
HSPG2-205ENST00000427897 EPCAMP16422 314 aa22.63■■□□□ 1.21
HSPG2-205ENST00000427897 CBX2Q14781 532 aaPredicted RBP22.63■■□□□ 1.21
HSPG2-205ENST00000427897 SLC39A14Q15043 492 aa22.63■■□□□ 1.21
HSPG2-205ENST00000427897 GLRA4Q5JXX5 417 aa22.63■■□□□ 1.21
HSPG2-205ENST00000427897 RARS2Q5T160 578 aaKnown RBP22.63■■□□□ 1.21
HSPG2-205ENST00000427897 SYCE2Q6PIF2 218 aa22.63■■□□□ 1.21
HSPG2-205ENST00000427897 HAUS6Q7Z4H7 955 aa22.63■■□□□ 1.21
HSPG2-205ENST00000427897 CEP57Q86XR8 500 aa22.63■■□□□ 1.21
HSPG2-205ENST00000427897 TMEM161BQ8NDZ6 487 aa22.63■■□□□ 1.21
HSPG2-205ENST00000427897 HASPINQ8TF76 798 aa22.63■■□□□ 1.21
HSPG2-205ENST00000427897 RIPOR3Q96MK2 946 aa22.63■■□□□ 1.21
HSPG2-205ENST00000427897 S1PR5Q9H228 398 aa22.63■■□□□ 1.21
HSPG2-205ENST00000427897 STK17AQ9UEE5 414 aa22.63■■□□□ 1.21
HSPG2-205ENST00000427897 DPP7Q9UHL4 492 aa22.63■■□□□ 1.21
HSPG2-205ENST00000427897 C19orf67A6NJJ6 358 aa22.62■■□□□ 1.21
HSPG2-205ENST00000427897 F8W810 466 aa22.62■■□□□ 1.21
HSPG2-205ENST00000427897 K7ENM7 598 aa22.62■■□□□ 1.21
HSPG2-205ENST00000427897 TOM1L1O75674 476 aa22.62■■□□□ 1.21
HSPG2-205ENST00000427897 SCP2P22307 547 aa22.62■■□□□ 1.21
HSPG2-205ENST00000427897 ABCD1P33897 745 aa22.62■■□□□ 1.21
HSPG2-205ENST00000427897 LIG4P49917 911 aa22.62■■□□□ 1.21
HSPG2-205ENST00000427897 ZPBP2Q6X784 338 aa22.62■■□□□ 1.21
HSPG2-205ENST00000427897 SV2BQ7L1I2 683 aa22.62■■□□□ 1.21
HSPG2-205ENST00000427897 TAS1R3Q7RTX0 852 aa22.62■■□□□ 1.21
HSPG2-205ENST00000427897 SLC22A17Q8WUG5 538 aa22.62■■□□□ 1.21
HSPG2-205ENST00000427897 ADAM7Q9H2U9 754 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms