RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 RBM19Q9Y4C8 960 aaKnown RBP16.33■□□□□ 0.2
RTN4-210ENST00000427710 MORC2Q9Y6X9 1032 aaPredicted RBP16.33■□□□□ 0.2
RTN4-210ENST00000427710 ANK1P16157 1881 aa16.33■□□□□ 0.2
RTN4-210ENST00000427710 C2orf71A6NGG8 1288 aa16.32■□□□□ 0.2
RTN4-210ENST00000427710 CASTOR2A6NHX0 329 aa16.32■□□□□ 0.2
RTN4-210ENST00000427710 MYMKA6NI61 221 aa16.32■□□□□ 0.2
RTN4-210ENST00000427710 K7ENM7 598 aa16.32■□□□□ 0.2
RTN4-210ENST00000427710 PTGESO14684 152 aa16.32■□□□□ 0.2
RTN4-210ENST00000427710 PPP6R2O75170 966 aa16.32■□□□□ 0.2
RTN4-210ENST00000427710 YEATS4O95619 227 aa16.32■□□□□ 0.2
RTN4-210ENST00000427710 NMT1P30419 496 aaKnown RBP16.32■□□□□ 0.2
RTN4-210ENST00000427710 STAT6P42226 847 aa16.32■□□□□ 0.2
RTN4-210ENST00000427710 NCKAP1LP55160 1127 aa16.32■□□□□ 0.2
RTN4-210ENST00000427710 STRN3Q13033 797 aa16.32■□□□□ 0.2
RTN4-210ENST00000427710 SMC1AQ14683 1233 aaKnown RBP16.32■□□□□ 0.2
RTN4-210ENST00000427710 SEZ6Q53EL9 994 aa16.32■□□□□ 0.2
RTN4-210ENST00000427710 GLRA4Q5JXX5 417 aa16.32■□□□□ 0.2
RTN4-210ENST00000427710 PTCRAQ6ISU1 281 aaPredicted RBP16.32■□□□□ 0.2
RTN4-210ENST00000427710 DDX53Q86TM3 631 aaKnown RBP16.32■□□□□ 0.2
RTN4-210ENST00000427710 EFHBQ8N7U6 833 aa16.32■□□□□ 0.2
RTN4-210ENST00000427710 STAMQ92783 540 aa16.32■□□□□ 0.2
RTN4-210ENST00000427710 DOCK6Q96HP0 2047 aa16.32■□□□□ 0.2
RTN4-210ENST00000427710 UHRF1Q96T88 793 aaPredicted RBP16.32■□□□□ 0.2
RTN4-210ENST00000427710 PAAF1Q9BRP4 392 aa16.32■□□□□ 0.2
RTN4-210ENST00000427710 NTPCRQ9BSD7 190 aaKnown RBP16.32■□□□□ 0.2
RTN4-210ENST00000427710 TCHPQ9BT92 498 aa16.32■□□□□ 0.2
RTN4-210ENST00000427710 PARVGQ9HBI0 331 aa16.32■□□□□ 0.2
RTN4-210ENST00000427710 PTPRHQ9HD43 1115 aa16.32■□□□□ 0.2
RTN4-210ENST00000427710 LARSQ9P2J5 1176 aaKnown RBP16.32■□□□□ 0.2
RTN4-210ENST00000427710 ANKFY1Q9P2R3 1169 aa16.32■□□□□ 0.2
RTN4-210ENST00000427710 STK17AQ9UEE5 414 aa16.32■□□□□ 0.2
RTN4-210ENST00000427710 MTCL1Q9Y4B5 1905 aaKnown RBP16.32■□□□□ 0.2
RTN4-210ENST00000427710 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.31■□□□□ 0.2
RTN4-210ENST00000427710 ABLIM1O14639 778 aa16.31■□□□□ 0.2
RTN4-210ENST00000427710 NCK2O43639 380 aa16.31■□□□□ 0.2
RTN4-210ENST00000427710 TBCAO75347 108 aaKnown RBP16.31■□□□□ 0.2
RTN4-210ENST00000427710 GRIK3Q13003 919 aa16.31■□□□□ 0.2
RTN4-210ENST00000427710 PDE12Q6L8Q7 609 aaKnown RBP16.31■□□□□ 0.2
RTN4-210ENST00000427710 SHC4Q6S5L8 630 aa16.31■□□□□ 0.2
RTN4-210ENST00000427710 SV2BQ7L1I2 683 aa16.31■□□□□ 0.2
RTN4-210ENST00000427710 HAUS6Q7Z4H7 955 aa16.31■□□□□ 0.2
RTN4-210ENST00000427710 DDX12PQ92771 950 aa16.31■□□□□ 0.2
RTN4-210ENST00000427710 BICD1Q96G01 975 aa16.31■□□□□ 0.2
RTN4-210ENST00000427710 FIZ1Q96SL8 496 aa16.31■□□□□ 0.2
RTN4-210ENST00000427710 APOL5Q9BWW9 433 aa16.31■□□□□ 0.2
RTN4-210ENST00000427710 HAPLN2Q9GZV7 340 aa16.31■□□□□ 0.2
RTN4-210ENST00000427710 NGRNQ9NPE2 291 aaKnown RBP16.31■□□□□ 0.2
RTN4-210ENST00000427710 TBC1D7Q9P0N9 293 aa16.31■□□□□ 0.2
RTN4-210ENST00000427710 CLEC1BQ9P126 229 aa16.31■□□□□ 0.2
RTN4-210ENST00000427710 C2CD2LO14523 706 aa16.3■□□□□ 0.2
RTN4-210ENST00000427710 TRAK2O60296 914 aa16.3■□□□□ 0.2
RTN4-210ENST00000427710 CUTAO60888 179 aa16.3■□□□□ 0.2
RTN4-210ENST00000427710 CLASP2O75122 1294 aaKnown RBP16.3■□□□□ 0.2
RTN4-210ENST00000427710 CTSAP10619 480 aa16.3■□□□□ 0.2
RTN4-210ENST00000427710 PROZP22891 400 aa16.3■□□□□ 0.2
RTN4-210ENST00000427710 MATR3P43243 847 aaKnown RBP eCLIP16.3■□□□□ 0.22e-7■■□□□ 13.8
RTN4-210ENST00000427710 ZNF131P52739 623 aa16.3■□□□□ 0.2
RTN4-210ENST00000427710 ZC2HC1CQ53FD0 456 aaPredicted RBP16.3■□□□□ 0.2
RTN4-210ENST00000427710 AXDND1Q5T1B0 1012 aaPredicted RBP16.3■□□□□ 0.2
RTN4-210ENST00000427710 MPZL3Q6UWV2 235 aa16.3■□□□□ 0.2
RTN4-210ENST00000427710 CCDC73Q6ZRK6 1079 aa16.3■□□□□ 0.2
RTN4-210ENST00000427710 SFR1Q86XK3 245 aa16.3■□□□□ 0.2
RTN4-210ENST00000427710 TMEM130Q8N3G9 435 aa16.3■□□□□ 0.2
RTN4-210ENST00000427710 MRPL43Q8N983 215 aaKnown RBP16.3■□□□□ 0.2
RTN4-210ENST00000427710 HASPINQ8TF76 798 aa16.3■□□□□ 0.2
RTN4-210ENST00000427710 B3GALT6Q96L58 329 aa16.3■□□□□ 0.2
RTN4-210ENST00000427710 IKZF4Q9H2S9 585 aa16.3■□□□□ 0.2
RTN4-210ENST00000427710 PCDHA7Q9UN72 937 aa16.3■□□□□ 0.2
RTN4-210ENST00000427710 MYO10Q9HD67 2058 aa16.3■□□□□ 0.2
RTN4-210ENST00000427710 C2orf16Q68DN1 1984 aa16.29■□□□□ 0.2
RTN4-210ENST00000427710 BDP1A6H8Y1 2624 aa16.29■□□□□ 0.2
RTN4-210ENST00000427710 GRXCR2A6NFK2 248 aa16.29■□□□□ 0.2
RTN4-210ENST00000427710 MEFVO15553 781 aaPredicted RBP16.29■□□□□ 0.2
RTN4-210ENST00000427710 BRD1O95696 1058 aa16.29■□□□□ 0.2
RTN4-210ENST00000427710 THP07101 528 aa16.29■□□□□ 0.2
RTN4-210ENST00000427710 IGFBP6P24592 240 aaPredicted RBP16.29■□□□□ 0.2
RTN4-210ENST00000427710 GRM5P41594 1212 aa16.29■□□□□ 0.2
RTN4-210ENST00000427710 NAB2Q15742 525 aa16.29■□□□□ 0.2
RTN4-210ENST00000427710 TPRNQ4KMQ1 711 aa16.29■□□□□ 0.2
RTN4-210ENST00000427710 FAM178BQ8IXR5 827 aa16.29■□□□□ 0.2
RTN4-210ENST00000427710 DHX58Q96C10 678 aa16.29■□□□□ 0.2
RTN4-210ENST00000427710 DNAJC19Q96DA6 116 aa16.29■□□□□ 0.2
RTN4-210ENST00000427710 MSLNLQ96KJ4 702 aa16.29■□□□□ 0.2
RTN4-210ENST00000427710 CCDC94Q9BW85 323 aaPredicted RBP16.29■□□□□ 0.2
RTN4-210ENST00000427710 COLEC11Q9BWP8 271 aa16.29■□□□□ 0.2
RTN4-210ENST00000427710 GOLGA2P5Q9HBQ8 144 aa16.29■□□□□ 0.2
RTN4-210ENST00000427710 CD207Q9UJ71 328 aa16.29■□□□□ 0.2
RTN4-210ENST00000427710 TBX20Q9UMR3 447 aa16.29■□□□□ 0.2
RTN4-210ENST00000427710 ZMYM2Q9UBW7 1377 aa16.28■□□□□ 0.2
RTN4-210ENST00000427710 TISP43B9A030 160 aa16.28■□□□□ 0.2
RTN4-210ENST00000427710 MBTPS2O43462 519 aa16.28■□□□□ 0.2
RTN4-210ENST00000427710 MCF2P10911 925 aa16.28■□□□□ 0.2
RTN4-210ENST00000427710 PDIA4P13667 645 aaKnown RBP16.28■□□□□ 0.2
RTN4-210ENST00000427710 ME1P48163 572 aa16.28■□□□□ 0.2
RTN4-210ENST00000427710 TUSC3Q13454 348 aa16.28■□□□□ 0.2
RTN4-210ENST00000427710 NOLC1Q14978 699 aaKnown RBP eCLIP16.28■□□□□ 0.2
RTN4-210ENST00000427710 PTPN14Q15678 1187 aa16.28■□□□□ 0.2
RTN4-210ENST00000427710 APBB1IPQ7Z5R6 666 aaPredicted RBP16.28■□□□□ 0.2
RTN4-210ENST00000427710 CDCA3Q99618 268 aaPredicted RBP16.28■□□□□ 0.2
RTN4-210ENST00000427710 HERC2P3Q9BVR0 1158 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms