RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 BFSP1Q12934 665 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 SCARA5Q6ZMJ2 495 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 ETNPPLQ8TBG4 499 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 KLC4Q9NSK0 619 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 SKAP2O75563 359 aaPredicted RBP14.34□□□□□ -0.11
USP42-203ENST00000426246 MAPK4P31152 587 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 CUL1Q13616 776 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 SEPT7Q16181 437 aaKnown RBP14.34□□□□□ -0.11
USP42-203ENST00000426246 C10orf76Q5T2E6 689 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 MCTP2Q6DN12 878 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 KDM7AQ6ZMT4 941 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 HAUS6Q7Z4H7 955 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 TMC3Q7Z5M5 1100 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 ZNF564Q8TBZ8 553 aaPredicted RBP14.34□□□□□ -0.11
USP42-203ENST00000426246 FEM1BQ9UK73 627 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 L3MBTL1Q9Y468 752 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 UPP2O95045 317 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 SREBF1P36956 1147 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 RPL21P46778 160 aaKnown RBP14.34□□□□□ -0.11
USP42-203ENST00000426246 TMED2Q15363 201 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 MOXD1Q6UVY6 613 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 ZNF365Q70YC5 407 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 TATDN2Q93075 761 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 FNBP1Q96RU3 617 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 SLC40A1Q9NP59 571 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 GGA3Q9NZ52 723 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 PCDHA2Q9Y5H9 948 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 LOC285556D6RIA3 1793 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 TCP11X1B4DZS4 312 aa14.33□□□□□ -0.11
USP42-203ENST00000426246 GOLGA8RI6L899 631 aa14.33□□□□□ -0.11
USP42-203ENST00000426246 FAM107AO95990 144 aa14.33□□□□□ -0.11
USP42-203ENST00000426246 KRT15P19012 456 aa14.33□□□□□ -0.11
USP42-203ENST00000426246 HOOK3Q86VS8 718 aa14.33□□□□□ -0.11
USP42-203ENST00000426246 APOBEC3FQ8IUX4 373 aaKnown RBP14.33□□□□□ -0.11
USP42-203ENST00000426246 KLF6Q99612 283 aaPredicted RBP14.33□□□□□ -0.11
USP42-203ENST00000426246 PDE4DIPQ5VU43 2346 aa14.33□□□□□ -0.12
USP42-203ENST00000426246 SESN3P58005 492 aa14.33□□□□□ -0.12
USP42-203ENST00000426246 SPIRE1Q08AE8 756 aa14.33□□□□□ -0.12
USP42-203ENST00000426246 MTMR3Q13615 1198 aa14.33□□□□□ -0.12
USP42-203ENST00000426246 MTERF2Q49AM1 385 aa14.33□□□□□ -0.12
USP42-203ENST00000426246 TRIM68Q6AZZ1 485 aa14.33□□□□□ -0.12
USP42-203ENST00000426246 ZNF449Q6P9G9 518 aa14.33□□□□□ -0.12
USP42-203ENST00000426246 FAM160B2Q86V87 743 aa14.33□□□□□ -0.12
USP42-203ENST00000426246 CCDC197Q8NCU1 140 aa14.33□□□□□ -0.12
USP42-203ENST00000426246 CEP170P1Q96L14 293 aa14.33□□□□□ -0.12
USP42-203ENST00000426246 ERP44Q9BS26 406 aa14.33□□□□□ -0.12
USP42-203ENST00000426246 VPS37BQ9H9H4 285 aa14.33□□□□□ -0.12
USP42-203ENST00000426246 DENND3A2RUS2 1198 aa14.33□□□□□ -0.12
USP42-203ENST00000426246 H0Y3Z8 333 aa14.33□□□□□ -0.12
USP42-203ENST00000426246 DDNO94850 711 aaPredicted RBP14.33□□□□□ -0.12
USP42-203ENST00000426246 MAP3K6O95382 1288 aa14.33□□□□□ -0.12
USP42-203ENST00000426246 FOSP01100 380 aaPredicted RBP14.33□□□□□ -0.12
USP42-203ENST00000426246 STX2P32856 288 aa14.33□□□□□ -0.12
USP42-203ENST00000426246 PPP4R3CPQ6ZMV5 832 aa14.33□□□□□ -0.12
USP42-203ENST00000426246 OTOP1Q7RTM1 612 aa14.33□□□□□ -0.12
USP42-203ENST00000426246 ZNF720Q7Z2F6 126 aa14.33□□□□□ -0.12
USP42-203ENST00000426246 CHURC1Q8WUH1 139 aa14.33□□□□□ -0.12
USP42-203ENST00000426246 ZKSCAN4Q969J2 545 aaPredicted RBP14.33□□□□□ -0.12
USP42-203ENST00000426246 STK33Q9BYT3 514 aa14.33□□□□□ -0.12
USP42-203ENST00000426246 FAM114A2Q9NRY5 505 aa14.33□□□□□ -0.12
USP42-203ENST00000426246 KCNH7Q9NS40 1196 aa14.33□□□□□ -0.12
USP42-203ENST00000426246 HSPBP1Q9NZL4 362 aa14.33□□□□□ -0.12
USP42-203ENST00000426246 LRRIQ4A6NIV6 560 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 F5H423 210 aaPredicted RBP14.32□□□□□ -0.12
USP42-203ENST00000426246 CYP3A4P08684 503 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 DCAF12L1Q5VU92 463 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 LPAR1Q92633 364 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 FAM20AQ96MK3 541 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 WDR46O15213 610 aaKnown RBP14.32□□□□□ -0.12
USP42-203ENST00000426246 KRT10P13645 584 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 CIITAP33076 1130 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 PDE6CP51160 858 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 GPC5P78333 572 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 ORC1Q13415 861 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 Q4G0T1 1027 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 RNF207Q6ZRF8 634 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 RFX8Q6ZV50 586 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 ZBTB33Q86T24 672 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 TEX2Q8IWB9 1127 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 TAS1R2Q8TE23 839 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 ARHGEF2Q92974 986 aaKnown RBP14.32□□□□□ -0.12
USP42-203ENST00000426246 KLRG1Q96E93 195 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 EDEM3Q9BZQ6 932 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 TMEM117Q9H0C3 514 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 TRIM33Q9UPN9 1127 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 GINS2Q9Y248 185 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 DNM1LO00429 736 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 PTPRAP18433 802 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 KCNV1Q6PIU1 500 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 SCYL3Q8IZE3 742 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 N4BP2L2Q92802 583 aaPredicted RBP14.32□□□□□ -0.12
USP42-203ENST00000426246 EFCC1Q9HA90 598 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 SEPT9Q9UHD8 586 aaPredicted RBP14.32□□□□□ -0.12
USP42-203ENST00000426246 ZNF148Q9UQR1 794 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 TRPC6Q9Y210 931 aa14.32□□□□□ -0.12
USP42-203ENST00000426246 CCDC188H7C350 402 aa14.31□□□□□ -0.12
USP42-203ENST00000426246 VCAM1P19320 739 aa14.31□□□□□ -0.12
USP42-203ENST00000426246 KRT17Q04695 432 aa14.31□□□□□ -0.12
USP42-203ENST00000426246 MTMR2Q13614 643 aa14.31□□□□□ -0.12
USP42-203ENST00000426246 DLK2Q6UY11 383 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms