RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 SF3B1O75533 1304 aaKnown RBP eCLIP19.58■□□□□ 0.73
GPC1-203ENST00000425056 ACKR2O00590 384 aa19.58■□□□□ 0.72
GPC1-203ENST00000425056 PTGESO14684 152 aa19.58■□□□□ 0.72
GPC1-203ENST00000425056 RECQL4O94761 1208 aa19.58■□□□□ 0.72
GPC1-203ENST00000425056 EDN1P05305 212 aa19.58■□□□□ 0.72
GPC1-203ENST00000425056 U2AF2P26368 475 aaKnown RBP eCLIP19.58■□□□□ 0.72
GPC1-203ENST00000425056 CCT6AP40227 531 aaKnown RBP19.58■□□□□ 0.72
GPC1-203ENST00000425056 NUBP1P53384 320 aa19.58■□□□□ 0.72
GPC1-203ENST00000425056 CREMQ03060 361 aa19.58■□□□□ 0.72
GPC1-203ENST00000425056 HSP90AA2PQ14568 343 aaPredicted RBP19.58■□□□□ 0.72
GPC1-203ENST00000425056 NBR1Q14596 966 aa19.58■□□□□ 0.72
GPC1-203ENST00000425056 ECM1Q16610 540 aa19.58■□□□□ 0.72
GPC1-203ENST00000425056 DEPTORQ8TB45 409 aa19.58■□□□□ 0.72
GPC1-203ENST00000425056 PHOX2BQ99453 314 aa19.58■□□□□ 0.72
GPC1-203ENST00000425056 PAAF1Q9BRP4 392 aa19.58■□□□□ 0.72
GPC1-203ENST00000425056 ADPGKQ9BRR6 497 aa19.58■□□□□ 0.72
GPC1-203ENST00000425056 PLEKHA4Q9H4M7 779 aa19.58■□□□□ 0.72
GPC1-203ENST00000425056 CACNG4Q9UBN1 327 aa19.58■□□□□ 0.72
GPC1-203ENST00000425056 DAXXQ9UER7 740 aaPredicted RBP19.58■□□□□ 0.72
GPC1-203ENST00000425056 CLUHO75153 1309 aa19.57■□□□□ 0.72
GPC1-203ENST00000425056 CCDC195A0A1B0GUA6 201 aa19.57■□□□□ 0.72
GPC1-203ENST00000425056 TMEM132AQ24JP5 1023 aa19.57■□□□□ 0.72
GPC1-203ENST00000425056 IGSF22Q8N9C0 903 aa19.57■□□□□ 0.72
GPC1-203ENST00000425056 RIN2Q8WYP3 895 aaPredicted RBP19.57■□□□□ 0.72
GPC1-203ENST00000425056 RABGGTAQ92696 567 aa19.57■□□□□ 0.72
GPC1-203ENST00000425056 KIFAP3Q92845 792 aa19.57■□□□□ 0.72
GPC1-203ENST00000425056 ZNF707Q96C28 371 aaPredicted RBP19.57■□□□□ 0.72
GPC1-203ENST00000425056 BHMT2Q9H2M3 363 aa19.57■□□□□ 0.72
GPC1-203ENST00000425056 WDR6Q9NNW5 1121 aaKnown RBP19.57■□□□□ 0.72
GPC1-203ENST00000425056 SNTG2Q9NY99 539 aa19.57■□□□□ 0.72
GPC1-203ENST00000425056 LRWD1Q9UFC0 647 aa19.57■□□□□ 0.72
GPC1-203ENST00000425056 VWA8A3KMH1 1905 aa19.57■□□□□ 0.72
GPC1-203ENST00000425056 TGM5O43548 720 aa19.56■□□□□ 0.72
GPC1-203ENST00000425056 N4BP1O75113 896 aaKnown RBP19.56■□□□□ 0.72
GPC1-203ENST00000425056 RFPL2O75678 378 aa19.56■□□□□ 0.72
GPC1-203ENST00000425056 KIF4AO95239 1232 aa19.56■□□□□ 0.72
GPC1-203ENST00000425056 EFNA5P52803 228 aa19.56■□□□□ 0.72
GPC1-203ENST00000425056 PDIA5Q14554 519 aa19.56■□□□□ 0.72
GPC1-203ENST00000425056 NAB2Q15742 525 aa19.56■□□□□ 0.72
GPC1-203ENST00000425056 DCAF4L1Q3SXM0 396 aa19.56■□□□□ 0.72
GPC1-203ENST00000425056 C8orf34Q49A92 452 aa19.56■□□□□ 0.72
GPC1-203ENST00000425056 EEF1DP3Q658K8 133 aa19.56■□□□□ 0.72
GPC1-203ENST00000425056 STAMQ92783 540 aa19.56■□□□□ 0.72
GPC1-203ENST00000425056 IFT74Q96LB3 600 aa19.56■□□□□ 0.72
GPC1-203ENST00000425056 KIFC3Q9BVG8 833 aa19.56■□□□□ 0.72
GPC1-203ENST00000425056 ZDHHC7Q9NXF8 308 aa19.56■□□□□ 0.72
GPC1-203ENST00000425056 USP34Q70CQ2 3546 aa19.55■□□□□ 0.72
GPC1-203ENST00000425056 CASTOR2A6NHX0 329 aa19.55■□□□□ 0.72
GPC1-203ENST00000425056 TADA2AO75478 443 aa19.55■□□□□ 0.72
GPC1-203ENST00000425056 THP07101 528 aa19.55■□□□□ 0.72
GPC1-203ENST00000425056 TOB1P50616 345 aaPredicted RBP19.55■□□□□ 0.72
GPC1-203ENST00000425056 TDGQ13569 410 aa19.55■□□□□ 0.72
GPC1-203ENST00000425056 RTP2Q5QGT7 225 aa19.55■□□□□ 0.72
GPC1-203ENST00000425056 LILRA6Q6PI73 481 aa19.55■□□□□ 0.72
GPC1-203ENST00000425056 PALB2Q86YC2 1186 aa19.55■□□□□ 0.72
GPC1-203ENST00000425056 SNX29Q8TEQ0 813 aa19.55■□□□□ 0.72
GPC1-203ENST00000425056 HASPINQ8TF76 798 aa19.55■□□□□ 0.72
GPC1-203ENST00000425056 SMG7Q92540 1137 aaKnown RBP19.55■□□□□ 0.72
GPC1-203ENST00000425056 RAB34Q9BZG1 259 aa19.55■□□□□ 0.72
GPC1-203ENST00000425056 IRF2BPLQ9H1B7 796 aa19.55■□□□□ 0.72
GPC1-203ENST00000425056 CXCL16Q9H2A7 254 aa19.55■□□□□ 0.72
GPC1-203ENST00000425056 KCNK12Q9HB15 430 aa19.55■□□□□ 0.72
GPC1-203ENST00000425056 DDX19AQ9NUU7 478 aaKnown RBP19.55■□□□□ 0.72
GPC1-203ENST00000425056 DUSP12Q9UNI6 340 aa19.55■□□□□ 0.72
GPC1-203ENST00000425056 KIAA1024Q9UPX6 916 aa19.55■□□□□ 0.72
GPC1-203ENST00000425056 USP20Q9Y2K6 914 aa19.55■□□□□ 0.72
GPC1-203ENST00000425056 PCDHB6Q9Y5E3 794 aa19.55■□□□□ 0.72
GPC1-203ENST00000425056 STK24Q9Y6E0 443 aa19.55■□□□□ 0.72
GPC1-203ENST00000425056 TRIP11Q15643 1979 aa19.55■□□□□ 0.72
GPC1-203ENST00000425056 SPATA31D3P0C874 917 aa19.54■□□□□ 0.72
GPC1-203ENST00000425056 MYBP10242 640 aa19.54■□□□□ 0.72
GPC1-203ENST00000425056 RPL17P18621 184 aaKnown RBP19.54■□□□□ 0.72
GPC1-203ENST00000425056 LIG1P18858 919 aa19.54■□□□□ 0.72
GPC1-203ENST00000425056 PTGDRQ13258 359 aa19.54■□□□□ 0.72
GPC1-203ENST00000425056 SPATA31D4Q6ZUB0 917 aa19.54■□□□□ 0.72
GPC1-203ENST00000425056 GLYCTKQ8IVS8 523 aa19.54■□□□□ 0.72
GPC1-203ENST00000425056 TMEM105Q8N8V8 129 aa19.54■□□□□ 0.72
GPC1-203ENST00000425056 PIK3R5Q8WYR1 880 aa19.54■□□□□ 0.72
GPC1-203ENST00000425056 NT5C3AQ9H0P0 336 aa19.54■□□□□ 0.72
GPC1-203ENST00000425056 IGSF9Q9P2J2 1179 aa19.54■□□□□ 0.72
GPC1-203ENST00000425056 PHLPP2Q6ZVD8 1323 aa19.53■□□□□ 0.72
GPC1-203ENST00000425056 LAD1O00515 517 aa19.53■□□□□ 0.72
GPC1-203ENST00000425056 GALR2O43603 387 aaPredicted RBP19.53■□□□□ 0.72
GPC1-203ENST00000425056 ELAVL2Q12926 359 aaKnown RBP19.53■□□□□ 0.72
GPC1-203ENST00000425056 NT5DC1Q5TFE4 455 aa19.53■□□□□ 0.72
GPC1-203ENST00000425056 ATF7IP2Q5U623 682 aa19.53■□□□□ 0.72
GPC1-203ENST00000425056 ASTLQ6HA08 431 aaPredicted RBP19.53■□□□□ 0.72
GPC1-203ENST00000425056 PRSS55Q6UWB4 352 aaPredicted RBP19.53■□□□□ 0.72
GPC1-203ENST00000425056 TTPALQ9BTX7 342 aa19.53■□□□□ 0.72
GPC1-203ENST00000425056 PRKD2Q9BZL6 878 aa19.53■□□□□ 0.72
GPC1-203ENST00000425056 EPS15L1Q9UBC2 864 aa19.53■□□□□ 0.72
GPC1-203ENST00000425056 FBXW11Q9UKB1 542 aa19.53■□□□□ 0.72
GPC1-203ENST00000425056 TMEM189-UBE2V1I3L0A0 370 aa19.52■□□□□ 0.72
GPC1-203ENST00000425056 GBP2P32456 591 aaPredicted RBP19.52■□□□□ 0.72
GPC1-203ENST00000425056 PRPHP41219 470 aa19.52■□□□□ 0.72
GPC1-203ENST00000425056 FAM171A1Q5VUB5 890 aa19.52■□□□□ 0.72
GPC1-203ENST00000425056 CWF19L1Q69YN2 538 aaKnown RBP19.52■□□□□ 0.72
GPC1-203ENST00000425056 MYADMQ96S97 322 aa19.52■□□□□ 0.72
GPC1-203ENST00000425056 MFSD1Q9H3U5 465 aa19.52■□□□□ 0.72
GPC1-203ENST00000425056 POLD4Q9HCU8 107 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms