RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 ECT2Q9H8V3 914 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 UBN1Q9NPG3 1134 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 ABCF3Q9NUQ8 709 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 BAIAP2L1Q9UHR4 511 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 RPL26L1Q9UNX3 145 aaKnown RBP16.3■□□□□ 0.2
C9orf3-204ENST00000424143 TMEM120BA0PK00 339 aa16.29■□□□□ 0.2
C9orf3-204ENST00000424143 SPOPO43791 374 aa16.29■□□□□ 0.2
C9orf3-204ENST00000424143 HIP1RO75146 1068 aa16.29■□□□□ 0.2
C9orf3-204ENST00000424143 MYBL1P10243 752 aa16.29■□□□□ 0.2
C9orf3-204ENST00000424143 FGFR4P22455 802 aa16.29■□□□□ 0.2
C9orf3-204ENST00000424143 GPC3P51654 580 aa16.29■□□□□ 0.2
C9orf3-204ENST00000424143 FMO1Q01740 532 aa16.29■□□□□ 0.2
C9orf3-204ENST00000424143 MKRN4PQ13434 485 aaPredicted RBP16.29■□□□□ 0.2
C9orf3-204ENST00000424143 SMYD5Q6GMV2 418 aa16.29■□□□□ 0.2
C9orf3-204ENST00000424143 ACAD10Q6JQN1 1059 aa16.29■□□□□ 0.2
C9orf3-204ENST00000424143 PODNQ7Z5L7 613 aa16.29■□□□□ 0.2
C9orf3-204ENST00000424143 NOP9Q86U38 636 aaKnown RBP16.29■□□□□ 0.2
C9orf3-204ENST00000424143 DHX38Q92620 1227 aaKnown RBP16.29■□□□□ 0.2
C9orf3-204ENST00000424143 KIFAP3Q92845 792 aa16.29■□□□□ 0.2
C9orf3-204ENST00000424143 TRIM11Q96F44 468 aa16.29■□□□□ 0.2
C9orf3-204ENST00000424143 CCDC77Q9BR77 488 aa16.29■□□□□ 0.2
C9orf3-204ENST00000424143 NUP85Q9BW27 656 aa16.29■□□□□ 0.2
C9orf3-204ENST00000424143 PPCSQ9HAB8 311 aa16.29■□□□□ 0.2
C9orf3-204ENST00000424143 PRR12Q9ULL5 1215 aa16.29■□□□□ 0.2
C9orf3-204ENST00000424143 AGAP1Q9UPQ3 857 aa16.29■□□□□ 0.2
C9orf3-204ENST00000424143 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.29■□□□□ 0.2
C9orf3-204ENST00000424143 MRPL11Q9Y3B7 192 aaKnown RBP16.29■□□□□ 0.2
C9orf3-204ENST00000424143 TCP11X1B4DZS4 312 aa16.28■□□□□ 0.2
C9orf3-204ENST00000424143 ATP2C2O75185 946 aa16.28■□□□□ 0.2
C9orf3-204ENST00000424143 CDH16O75309 829 aa16.28■□□□□ 0.2
C9orf3-204ENST00000424143 LRRN2O75325 713 aa16.28■□□□□ 0.2
C9orf3-204ENST00000424143 ENTPD3O75355 529 aa16.28■□□□□ 0.2
C9orf3-204ENST00000424143 GAS8O95995 478 aa16.28■□□□□ 0.2
C9orf3-204ENST00000424143 STRN3Q13033 797 aa16.28■□□□□ 0.2
C9orf3-204ENST00000424143 RASA2Q15283 850 aa16.28■□□□□ 0.2
C9orf3-204ENST00000424143 PARP6Q2NL67 630 aa16.28■□□□□ 0.2
C9orf3-204ENST00000424143 AADACL2Q6P093 401 aa16.28■□□□□ 0.2
C9orf3-204ENST00000424143 ATL2Q8NHH9 583 aa16.28■□□□□ 0.2
C9orf3-204ENST00000424143 TMC2Q8TDI7 906 aa16.28■□□□□ 0.2
C9orf3-204ENST00000424143 SH3TC2Q8TF17 1288 aa16.28■□□□□ 0.2
C9orf3-204ENST00000424143 DYDC1Q8WWB3 177 aa16.28■□□□□ 0.2
C9orf3-204ENST00000424143 EURLQ9NYK6 297 aa16.28■□□□□ 0.2
C9orf3-204ENST00000424143 FAM198AQ9UFP1 575 aa16.28■□□□□ 0.2
C9orf3-204ENST00000424143 NEU2Q9Y3R4 380 aa16.28■□□□□ 0.2
C9orf3-204ENST00000424143 ANKRD63C9JTQ0 380 aa16.27■□□□□ 0.2
C9orf3-204ENST00000424143 E7ENQ6 273 aa16.27■□□□□ 0.2
C9orf3-204ENST00000424143 NDC80O14777 642 aa16.27■□□□□ 0.2
C9orf3-204ENST00000424143 SGPL1O95470 568 aa16.27■□□□□ 0.2
C9orf3-204ENST00000424143 PLS3P13797 630 aa16.27■□□□□ 0.2
C9orf3-204ENST00000424143 GBP2P32456 591 aaPredicted RBP16.27■□□□□ 0.2
C9orf3-204ENST00000424143 PSEN1P49768 467 aa16.27■□□□□ 0.2
C9orf3-204ENST00000424143 MXI1P50539 228 aa16.27■□□□□ 0.2
C9orf3-204ENST00000424143 CLNS1AP54105 237 aaKnown RBP16.27■□□□□ 0.2
C9orf3-204ENST00000424143 MTFR1Q15390 333 aa16.27■□□□□ 0.2
C9orf3-204ENST00000424143 USH1GQ495M9 461 aa16.27■□□□□ 0.2
C9orf3-204ENST00000424143 SGO2Q562F6 1265 aa16.27■□□□□ 0.2
C9orf3-204ENST00000424143 CMPK2Q5EBM0 449 aa16.27■□□□□ 0.2
C9orf3-204ENST00000424143 TBC1D1Q86TI0 1168 aaPredicted RBP16.27■□□□□ 0.2
C9orf3-204ENST00000424143 ZNF677Q86XU0 584 aa16.27■□□□□ 0.2
C9orf3-204ENST00000424143 TDRPQ86YL5 185 aa16.27■□□□□ 0.2
C9orf3-204ENST00000424143 ZFPM1Q8IX07 1006 aa16.27■□□□□ 0.2
C9orf3-204ENST00000424143 TCP11Q8WWU5 503 aa16.27■□□□□ 0.2
C9orf3-204ENST00000424143 FAM212AQ96EL1 285 aa16.27■□□□□ 0.2
C9orf3-204ENST00000424143 RAB3IPQ96QF0 476 aaPredicted RBP16.27■□□□□ 0.2
C9orf3-204ENST00000424143 MTFR1LQ9H019 292 aa16.27■□□□□ 0.2
C9orf3-204ENST00000424143 UNC45AQ9H3U1 944 aa16.27■□□□□ 0.2
C9orf3-204ENST00000424143 RGPD3A6NKT7 1758 aaPredicted RBP16.27■□□□□ 0.2
C9orf3-204ENST00000424143 RGPD4Q7Z3J3 1758 aa16.27■□□□□ 0.2
C9orf3-204ENST00000424143 ADAMTSL1Q8N6G6 1762 aa16.27■□□□□ 0.19
C9orf3-204ENST00000424143 DDTLA6NHG4 134 aaPredicted RBP16.27■□□□□ 0.19
C9orf3-204ENST00000424143 ZC3H11AO75152 810 aaKnown RBP eCLIP16.27■□□□□ 0.19
C9orf3-204ENST00000424143 ANP32DO95626 131 aa16.27■□□□□ 0.19
C9orf3-204ENST00000424143 CLTAP09496 248 aa16.27■□□□□ 0.19
C9orf3-204ENST00000424143 KRT17Q04695 432 aa16.27■□□□□ 0.19
C9orf3-204ENST00000424143 PPP1R2P3Q6NXS1 205 aa16.27■□□□□ 0.19
C9orf3-204ENST00000424143 PADI6Q6TGC4 694 aa16.27■□□□□ 0.19
C9orf3-204ENST00000424143 SH3BP5LQ7L8J4 393 aa16.27■□□□□ 0.19
C9orf3-204ENST00000424143 ANKRD35Q8N283 1001 aa16.27■□□□□ 0.19
C9orf3-204ENST00000424143 KLHL29Q96CT2 875 aa16.27■□□□□ 0.19
C9orf3-204ENST00000424143 KREMEN1Q96MU8 473 aa16.27■□□□□ 0.19
C9orf3-204ENST00000424143 TMEM237Q96Q45 408 aa16.27■□□□□ 0.19
C9orf3-204ENST00000424143 TMEM117Q9H0C3 514 aa16.27■□□□□ 0.19
C9orf3-204ENST00000424143 IKZF4Q9H2S9 585 aa16.27■□□□□ 0.19
C9orf3-204ENST00000424143 RANBP17Q9H2T7 1088 aaKnown RBP16.27■□□□□ 0.19
C9orf3-204ENST00000424143 HSPBP1Q9NZL4 362 aa16.27■□□□□ 0.19
C9orf3-204ENST00000424143 KLHL14Q9P2G3 628 aa16.27■□□□□ 0.19
C9orf3-204ENST00000424143 NRXN2Q9P2S2 1712 aa16.26■□□□□ 0.19
C9orf3-204ENST00000424143 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.26■□□□□ 0.19
C9orf3-204ENST00000424143 TCRBV7S2A1N4TA0A589 114 aa16.26■□□□□ 0.19
C9orf3-204ENST00000424143 K7ENM7 598 aa16.26■□□□□ 0.19
C9orf3-204ENST00000424143 GRIN3BO60391 1043 aa16.26■□□□□ 0.19
C9orf3-204ENST00000424143 P4HBP07237 508 aaKnown RBP16.26■□□□□ 0.19
C9orf3-204ENST00000424143 CYP11B1P15538 503 aa16.26■□□□□ 0.19
C9orf3-204ENST00000424143 HOXA13P31271 388 aaPredicted RBP16.26■□□□□ 0.19
C9orf3-204ENST00000424143 ALDH5A1P51649 535 aaPredicted RBP16.26■□□□□ 0.19
C9orf3-204ENST00000424143 MAP2K1Q02750 393 aaPredicted RBP16.26■□□□□ 0.19
C9orf3-204ENST00000424143 E2F5Q15329 346 aa16.26■□□□□ 0.19
C9orf3-204ENST00000424143 CCNG2Q16589 344 aa16.26■□□□□ 0.19
C9orf3-204ENST00000424143 FAM133BQ5BKY9 247 aaKnown RBP16.26■□□□□ 0.19
C9orf3-204ENST00000424143 RBM26Q5T8P6 1007 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms